BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg477665
Length=1488
Score E
Sequences producing significant alignments: (Bits) Value
AT3G04060.1 | Symbols: anac046, NAC046 | NAC domain containing ... 2250 0.0
AT5G61430.1 | Symbols: ANAC100, ATNAC5, NAC100 | NAC domain con... 254 2e-66
AT5G53950.1 | Symbols: CUC2, ANAC098, ATCUC2 | NAC (No Apical M... 189 7e-47
> AT3G04060.1 | Symbols: anac046, NAC046 | NAC domain containing
protein 46 | chr3:1053366-1055163 REVERSE LENGTH=1487
Length=1487
Score = 2250 bits (1218), Expect = 0.0
Identities = 1376/1447 (95%), Gaps = 31/1447 (2%)
Strand=Plus/Plus
Query 1 ATATTTTTATTTTCATTTCCTTTAACTGCATAGttcttcctcaaatttctaatacctttg 60
||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||
Sbjct 1 ATACTTTTATTTTCATTTCCTTTAACTGCATAGTTCTTCCTCAAATTGCTCATACCTTTG 60
Query 61 cttctctttctttctttcttcaacctcttatttcttctcCAGCGCCAACGTGTATCTGCA 120
||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||
Sbjct 61 CTTCTCTTTCTTTCTTTATTCAACCTCTTATTTCTTCTTCAGCACCAACGTGTATCTGCA 120
Query 121 GTAAACAGTACATATCCATCGATCGATCTCCTCAAAAAGTTCTTGTTATCTTGAAATCCA 180
|||||| |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct 121 GTAAAC---ACATATCCATCGATCGATCTCCTCAAAAAGTTATTGTTTTCTTG------- 170
Query 181 ACAAGG-TTGTTTCTTGTTCTTGATCAAGCGTATACATATATATAGATGGTGGAAGAAGG 239
|||| || |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 171 --AAGGATT-TTTCTTGTTCTTGATCAAGC--ATACATATATATAGATGGTGGAAGAAGG 225
Query 240 CGGCGTAGTTGTGAATCAAGGAGGAGATCAGGAGGTGGTGGATTTGCCTCCAGGGTTTCG 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 226 CGGCGTAGTTGTGAATCAAGGAGGAGATCAGGAGGTGGTGGATTTGCCTCCGGGGTTTCG 285
Query 300 GTTTCACCCAACTGATGAAGAGATAATAACTCACTACCTCAAAGAGAAGGTCTTCAACAT 359
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 286 GTTTCACCCTACTGATGAAGAGATAATAACTCACTACCTCAAAGAGAAGGTCTTCAACAT 345
Query 360 CCGATTCACCGCGGCAGCGATTGGTCAAGCCGACCTCAACAAGAACGAGCCATGGGATCT 419
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 346 CCGATTTACCGCGGCAGCGATTGGTCAAGCCGACCTCAACAAGAACGAGCCATGGGATCT 405
Query 420 ACCAAAAATTGCAAAGATGGGAGAGAAGGAGTTTTACTTTTTCTGCCAGAGGGATCGGAA 479
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 406 ACCAAAGATTGCAAAGATGGGGGAGAAGGAGTTTTACTTTTTCTGCCAGAGGGATCGGAA 465
Query 480 GTATCCGACCGGGATGAGGACGAACCGTGCGACCGTGTCTGGTTATTGGAAGGCGACTGG 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 466 GTATCCGACCGGGATGAGGACGAACCGTGCGACCGTGTCTGGTTATTGGAAGGCGACCGG 525
Query 540 GAAGGACAAGGAGATCTTTAGAGGCAAAGGTTGTCTTGTTGGGATGAAGAAAACACTTGT 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 GAAGGACAAGGAGATCTTTAGAGGCAAAGGTTGTCTTGTTGGGATGAAGAAAACACTTGT 585
Query 600 TTTCTATAGAGGAAGAGCTCCTAAAGGTGAAAAGACCAATTGGGTTATGCATGAATATCG 659
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 586 TTTCTATACAGGAAGAGCTCCTAAAGGTGAAAAGACCAATTGGGTTATGCATGAATATCG 645
Query 660 TCTTGATGGCAAATATTCTTATCATAACCTCCCCAAAACCGCAAGGGATGAATGGGTGGT 719
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 646 TCTTGATGGAAAATATTCTTATCATAACCTCCCCAAAACCGCAAGGGATGAATGGGTGGT 705
Query 720 GTGTAGGGTTTTTCACAAGAGCGATCCTAGTACTACAATCACTCCTACAAGCCAACTCTC 779
|||||||||||||||||||| || ||||||||||||||||||| |||||| ||||||||
Sbjct 706 GTGTAGGGTTTTTCACAAGAACGCTCCTAGTACTACAATCACTACTACAAAACAACTCTC 765
Query 780 AAGGATTGATTCACTTGATAACATTGATCATCTCTTAGACTTCTCGTCTCTCCCTCCTCT 839
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 766 AAGGATTGATTCTCTTGATAACATTGATCATCTCTTAGACTTCTCATCTCTCCCTCCTCT 825
Query 840 CATAGATCCGGGTTTCTTGGGTCAATCCAGCCCAAGCTTCTCCGGTGTCCGCCAACAACA 899
||||||||||||||||||||||||| || |||||||||||||||||| ||| ||||||||
Sbjct 826 CATAGATCCGGGTTTCTTGGGTCAACCCGGCCCAAGCTTCTCCGGTGCCCGTCAACAACA 885
Query 900 CGACCTCAAACCTGTCCTCCACCATCCTACAACCGCACCAGTCGACAACACTTACC-TCT 958
||| ||||||||||| |||||||||||||||||||||||||||||||||||||||| ||
Sbjct 886 CGATCTCAAACCTGTTCTCCACCATCCTACAACCGCACCAGTCGACAACACTTACCTTC- 944
Query 959 CTACCCAAACTTTCAATTTCCCTTACCACTCGGTCCATAATTCCGGATCTGATTTCGGTT 1018
|||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 945 CTACCCAAGCTCTCAATTTCCCTTACCACTCGGTCCATAATTCCGGATCTGATTTCGGCT 1004
Query 1019 ACGGGGCAGGTTCAGGCAATAATGACAAAGGTATGATTAAGTTGGAGCATTCTCTTGTGA 1078
||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 1005 ACGGGGCAGGTTCAGGCAATAATAACAAAGGTATGATCAAGTTGGAGCATTCTCTTGTGA 1064
Query 1079 GTGTGTCTCAAGAAACCGGTTTGAGTTCCGATGTGAACACAACCGCAACGCCAGAGATAT 1138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1065 GTGTGTCTCAAGAAACCGGTTTGAGTTCCGATGTGAACACAACCGCAACGCCAGAGATAT 1124
Query 1139 CTTCTTATCCAATGATGATGAATCCGGCAGCCAATGCGGCGGTGATGGATGGTAGCAAGT 1198
||||||||||||||||||||||||||||| | || ||||||||||||||||
Sbjct 1125 CTTCTTATCCAATGATGATGAATCCGGCA---A-TG--------ATGGATGGTAGCAAGT 1172
Query 1199 CAGCGTGTGATGATCTTGATGACTTGATCTTCTGGGAAGATTTATATACTAGCTAAATTT 1258
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1173 CAGCGTGTGATGGTCTTGATGACTTGATCTTCTGGGAAGATTTATATACTAGCTAAATTT 1232
Query 1259 GGGAAAAGGTTATTTGTTAATTGTGATTGAAGAGTGGCATATTGATTACTTGTCTAGTGT 1318
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1233 GGGAAAAGGTTATTTGTTAATTGTGATTGAAGAGTGGCATATTGATTACTCGTCTAGTGT 1292
Query 1319 TTTTAATCGTGTAATTAGTTCGTATATAATATACATGTACATAAGATCATTAGGTTTATT 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1293 TTTTAATCGTGTAATTAGTTCGTATATAATATACATGTACATAAGATCATTAGGTTTATT 1352
Query 1379 AGGCCATTGGACTTCAGTTCGATGATTGTTTACTTAGTTTTTAGCTTGAGAAAAAAGGCT 1438
|||| ||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||
Sbjct 1353 AGGC-ATTGGACTTTAGTTCGGTGATTGCTTACCTAGTTTTTAGCTTGAGAAAAAAGGCT 1411
Query 1439 GTCATTG 1445
|||||||
Sbjct 1412 GTCATTG 1418
> AT5G61430.1 | Symbols: ANAC100, ATNAC5, NAC100 | NAC domain containing
protein 100 | chr5:24701122-24702761 REVERSE LENGTH=1425
Length=1425
Score = 254 bits (137), Expect = 2e-66
Identities = 368/476 (77%), Gaps = 29/476 (6%)
Strand=Plus/Plus
Query 278 TGGATTTGCCTCCAGGGTTTC-GGTTTCACCCAACTGATGAAGAGA-TAATAACTCACTA 335
||||||| ||||| ||| ||| ||||||| ||||| |||||||| | | |||||||||||
Sbjct 249 TGGATTTACCTCCTGGG-TTCAGGTTTCATCCAACAGATGAAGA-ACTCATAACTCACTA 306
Query 336 CCT-CAAAGAGAAGG-TCTTCAACATCC-GATTCACCGCGGCAGCGATTGGTCAAGCCGA 392
|| || | |||||| |||| ||| || | ||| | || ||| || ||| ||| ||
Sbjct 307 TCTCCATA-AGAAGGTTCTT-GACA-CCAGCTTCTCAGCTAAAGCTATCGGTGAAGTTGA 363
Query 393 CCTCAACAAGAAC-GAGCCATGGGA-TCTACCAAAAATTGCAAAGATGGGAGAGAAGGAG 450
| ||||| | | ||||||||||| | ||||| || ||||| ||||| ||||| ||
Sbjct 364 TTTAAACAA-ATCAGAGCCATGGGAGT-TACCATGGATGGCAAAAATGGGTGAGAAAGAA 421
Query 451 TTTTACTTTTTCTGCCAGAGGGATC-GGAAGTATCCGACCGGGATGAGGACGAACCGTGC 509
| || |||||||| ||| || | | |||||||| ||||| | || || ||||| ||
Sbjct 422 TGGTATTTTTTCTGTGTGAGAGA-CAGAAAGTATCCCACCGGTTTAAGAACTAACCGAGC 480
Query 510 GACCG-TGTCTGGTTATTGGAAGGCGACTGGGAAGGACAAGGAGATCTTTAGAGGCAAAG 568
|| | | | ||||||||||||||||| |||||||| || ||||| | ||||||||
Sbjct 481 AACTGAAG-CCGGTTATTGGAAGGCGACCGGGAAGGATAAAGAGATATACCGAGGCAAA- 538
Query 569 GTTGTCTTGTTGGGATGAAGAAAACACTTGTTTTCTATAGAGGAAGAGCTCCTAAAGGTG 628
| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 539 --TCACTTGTTGGGATGAAGAAGACACTTGTTTTCTATAGAGGAAGAGCTCCTAAAGGTC 596
Query 629 A-AAAGACCAATTGGGTTATGCATGAATATC-GTCTTGATGGCAAATATTCT-TATC-AT 684
| ||| ||||| ||||| |||||||| || | | ||||| || ||| ||||| | | ||
Sbjct 597 AGAAA-ACCAACTGGGTGATGCATGAGTA-CAGGCTTGAAGG-AAA-ATTCTCTGCCCAT 652
Query 685 AACCTCCCCAAAACCGCAAGGGATGAATGGGTGGTGTGTAGGGTTTTTCACAAGAG 740
||| | || |||||||||| | ||||||||||| | || ||||| || || |||||
Sbjct 653 AACTTGCCGAAAACCGCAAAGAATGAATGGGTGATATGCAGGGTGTTCCAAAAGAG 708
> AT5G53950.1 | Symbols: CUC2, ANAC098, ATCUC2 | NAC (No Apical
Meristem) domain transcriptional regulator superfamily protein
| chr5:21901966-21903823 REVERSE LENGTH=1156
Length=1156
Score = 189 bits (102), Expect = 7e-47
Identities = 244/310 (79%), Gaps = 19/310 (6%)
Strand=Plus/Plus
Query 433 AAGATGGGAGAGAAGGAGTTTTACTT-TTTCTGCCAGAGGGATCGGAAGTATCCGACCGG 491
|||||||||||||| || | ||||| ||| ||| | || ||||||||||||| |||
Sbjct 227 AAGATGGGAGAGAAAGAATGGTACTTCTTT-AGCCTCCGTGACCGGAAGTATCCGA-CGG 284
Query 492 GA-TGAGGACGAACCGTGCGACCGTGTCTGGTTATTGGAAGGCGACTGGGAAGGACAAG- 549
|| |||| || ||| | || || | | ||||||| ||||| || || || || ||| ||
Sbjct 285 GACTGAGAACTAACAGAGCAACTGAGGCTGGTTACTGGAAAGCTACCGGAAAAGAC-AGA 343
Query 550 GAGATCTTTAGAGGCAAAG-GTTGT---CTTGTTGGGATGAAGAAAACACTTGT-TTTCT 604
||||||||||| ||||| |||| ||||||||||||||||| || ||||| ||| |
Sbjct 344 GAGATCTTTAG-TTCAAAGACTTGTGCACTTGTTGGGATGAAGAAGACTCTTGTCTTT-T 401
Query 605 ATAGAGGAAGAGCTCCTAAAGGTGAAAAGACCAATTGGGTTATGCATGAATATCGTCTTG 664
| | |||||||||||| ||||| || |||| ||||||||||||||||||||||||||||
Sbjct 402 ACAAAGGAAGAGCTCCGAAAGGAGAGAAGAGTAATTGGGTTATGCATGAATATCGTCTTG 461
Query 665 ATGGCAAATAT-TCTTATCATAACCTCCCCAA-AACCGC-AAGGGATGAATGGGTGGTGT 721
| ||||||| | ||||| ||| | || | || || | | |||| ||||||||||| | |
Sbjct 462 AAGGCAAAT-TCTCTTACCATTTCATCTC-AAGAAGCTCCAAGG-ATGAATGGGTGATCT 518
Query 722 GTAGGGTTTT 731
|||||||||
Sbjct 519 CTAGGGTTTT 528
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73393196790
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5