BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg477802 Length=1578 Score E Sequences producing significant alignments: (Bits) Value AT3G05165.1 | Symbols: | Major facilitator superfamily protein... 1823 0.0 AT3G05160.1 | Symbols: | Major facilitator superfamily protein... 1561 0.0 > AT3G05165.1 | Symbols: | Major facilitator superfamily protein | chr3:1458136-1462917 REVERSE LENGTH=1619 Length=1619 Score = 1823 bits (987), Expect = 0.0 Identities = 1076/1119 (96%), Gaps = 6/1119 (1%) Strand=Plus/Plus Query 62 CAAGAAGATTTCTTGGGAAAAAATATTAAGAGGGGTGAAGGATTAATCGTAAGAAATGGT 121 ||| |||||||||||||| |||||| | | || |||||||||| || | || |||||| Sbjct 13 CAA-AAGATTTCTTGGGAGAAAATA--AGGTGGATTGAAGGATTAGTCTTTAGGAATGGT 69 Query 122 GGT---GGAGGAGAATAGAAGCATGGAGGAAGGACTTCTTCGGCATGGAAACGACAGAGA 178 ||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||| Sbjct 70 GGTGGAGGAGGAGAATAGAAGCATGGAGGAAGGACTTCTTCAGCATCAAAACGACAGAGA 129 Query 179 TGATCGTCGTATCACTGCTTGTGTTATCCTCAGCACTTTTGTCGCTGTTTGTAGTGCCTT 238 ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| Sbjct 130 TGATCGTCGTATCACAGCTTGTGTCATCCTCAGCACTTTTGTCGCTGTTTGTAGTGCCTT 189 Query 239 CAGCTATGGATGTGCCGCTGGTTATACTTCAGGCGCTGAGACTGCTATCATGAAGGAGTT 298 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 190 CAGCTACGGATGTGCCGCTGGTTATACTTCAGGCGCTGAGACTGCTATCATGAAGGAGTT 249 Query 299 AAACCTTTCTATGGCACAATTTTCAGCGTTTGGCTCCTTTATGAATGTGGGGGGTGCGGT 358 | |||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| Sbjct 250 AGACCTTTCTATGGCACAATTTTCAGCGTTTGGCTCCTTTCTGAATGTGGGAGGTGCGGT 309 Query 359 GGGGGCCTTGTTCAGCGGTCAATTGGCAGTCATCCTCGGCAGAAGACGAACGTTGTGGGC 418 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 310 GGGGGCCTTGTTCAGCGGTCAATTGGCAGTCATCCTCGGCAGAAGACGAACGTTGTGGGC 369 Query 419 ATGCGATTTTTTCTGCATTTTTGGCTGGCTCTCCATTGCTTTCGCAAAGAATGTCTTCTG 478 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 370 ATGCGATTTTTTCTGCGTTTTTGGCTGGCTCTCCATTGCTTTCGCAAAGAATGTCTTCTG 429 Query 479 GCTGGACTTGGGAAGAATTTCCTTGGGCATAGGAGTCGGCTTGATTAGCTACGTGGTCCC 538 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 430 GCTGGACTTGGGAAGAATTTCCTTGGGCATAGGAGTCGGCTTGATTAGCTACGTGGTCCC 489 Query 539 TGTCTATATTGCGGAAATCACTCCAAAACATGTTCGTGGCGCATTTACTTCTTCAAACCA 598 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 490 AGTCTATATTGCGGAAATCACTCCAAAACATGTTCGTGGCGCATTTACTGCTTCAAACCA 549 Query 599 GCTTCTTCAAAACAGTGGAATTTCCCTAATTTAtttttttGGGACTGTAATTAATTGGCG 658 ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct 550 GCTTCTTCAAAACAGTGGAGTTTCCCTGATTTATTTTTTTGGGACTGTAATTAATTGGCG 609 Query 659 GGTTCTGGCTGTTATAGGTGCAATTCCATGCATCCTTCAAATGATCGGTATATTTTACAT 718 |||| |||| ||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 610 GGTTATGGCCGTTATAGGTGCAATTCCATGCATCCTTCAAACGATCGGTATATTTTTTAT 669 Query 719 ACCGGAATCTCCAAGATGGCTGGCTAAAATCGGTTTAGGCAAAGAAGTAGAAAGTTCTTT 778 ||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||| Sbjct 670 ACCGGAATCTCCAAGATGGCTGGCTAAAATCCGTTTAAGTAAAGAAGTAGAAAGTTCTTT 729 Query 779 GCATCGACTTAGAGGGAAAGATACTGATGTTTCAGGTGAAGCAGCTGAAATTCAGGTTAT 838 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 730 GCATCGACTTAGAGGGAAAGATACTGATGTTTCAGGTGAAGCAGCTGAAATTCAGGTTAT 789 Query 839 GACAAAAATGCTTGAAGAAGATTCAAAGTCTAGTTTCTCTGACATGTTTCAGAAGAAGTA 898 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 790 GACAAAAATGCTTGAAGAAGATTCAAAGTCTAGTTTCTCTGACATGTTTCAGAAGAAGTA 849 Query 899 TAGACGAACTCTTGTGGTTGGAATTGGTTTAATGTTGATACAACAATTATCTGGAGCTAG 958 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 850 CAGACGAACTCTTGTGGTTGGAATTGGTTTAATGTTGATACAACAATTATCTGGAGCTAG 909 Query 959 TGGTATCACATATTATTCAAATGCCATATTTAGGAAAGCTGGCTTTTCAGAGAGACTTGG 1018 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 910 CGGTATCACATATTATTCAAATGCCATATTTAGAAAAGCTGGCTTTTCAGAGAGACTTGG 969 Query 1019 ATCAATGATATTTGGTGTGTTCGTGATCCCAAAAGCTTTGGTTAGTCTGATTCTTGTGGA 1078 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 970 ATCAATGATATTTGGTGTGTTCGTGATCCCAAAAGCTTTGGTTGGTCTGATTCTTGTGGA 1029 Query 1079 TAAATGGGGAAGACGACCACTCCTATTGGCTTCTGCTATTGGAATGTCCATCGGATCCTT 1138 || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1030 TAGATGGGGAAGACGACCACTCCTATTGGCTTCTGCTGTTGGAATGTCCATCGGATCCTT 1089 Query 1139 GCTTATTGGAGTTAGCTTCACGTTACAGCAAATGAATGT 1177 ||||||||||||||||||||||||||||||||||||||| Sbjct 1090 GCTTATTGGAGTTAGCTTCACGTTACAGCAAATGAATGT 1128 Score = 505 bits (273), Expect = 6e-142 Identities = 376/421 (89%), Gaps = 25/421 (6%) Strand=Plus/Plus Query 1176 GTCTACTTCGGATGTTTTGCATTCGGTATAGGAGGGCTACCTTGGGTCATTATGTCTGAG 1235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1172 GTCTACTTCGGATGTTTTGCATTCGGTATAGGAGGGCTACCTTGGGTCATTATGTCTGAG 1231 Query 1236 ATCTTTCCGATAAATATAAAAGTTTCAGCAGGAACAATAGTAGCATTAACATCATGGACT 1295 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1232 ATCTTTCCGATAAATATAAAAGTTTCAGCAGGAACAATTGTAGCATTAACATCATGGACT 1291 Query 1296 AGTGGGTGGTTCGTGAGTTACGCTTTCAACTTTATGTTTGAATGGAGCGCACAAGGAACA 1355 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1292 AGTGGGTGGTTCGTGAGTTACGCTTTCAACTTTATGTTTGAATGGAGCGCACAAGGAACA 1351 Query 1356 TTTTACATATTTGCGGCTGTCGGAGGAATGTCATTGATTTTTATTTGGATGGTCGTACCG 1415 ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 1352 TTTTACATATTTGCGGCTGTCGGAGGAATGTCATTCATTTTTATTTGGATGCTCGTACCG 1411 Query 1416 GAAACCAAAGGACAGTCACTGGAAGAGTTGCAAGCTTCGCTTACCGGGACAACCTAAATT 1475 |||||||||||||| ||| ||||||| || |||||||||||||| |||||| ||||||| Sbjct 1412 GAAACCAAAGGACAATCATTGGAAGAATTACAAGCTTCGCTTACGGGGACATCCTAAAT- 1470 Query 1476 GTAAAATACACGTTAAATTGTAATATA-T-T-AATTTTGTTTA-T-------TCA--TT- 1521 | | | | ||| ||||||||||| | | |||||||||| | | | || Sbjct 1471 GCACA-T-----TTATATTGTAATATACTATTAATTTTGTTTGGTAAAAAGATAAAATTT 1524 Query 1522 AT---CTATTGGCAGTCGCATTGCAAATAATTG-TGTATTTTATAATATTATTTGCATAT 1577 || || ||| ||||||||||||||||||| |||||||| ||| ||||||||||||| Sbjct 1525 ATTTTCTGTTGTCAGTCGCATTGCAAATAATAAATGTATTTTGTAACATTATTTGCATAT 1584 Query 1578 T 1578 | Sbjct 1585 T 1585 > AT3G05160.1 | Symbols: | Major facilitator superfamily protein | chr3:1453106-1457150 REVERSE LENGTH=1691 Length=1691 Score = 1561 bits (845), Expect = 0.0 Identities = 1043/1138 (92%), Gaps = 15/1138 (1%) Strand=Plus/Plus Query 46 AAGATTTCTTGTTGTTCA--AGAAGATTTCTTGGGAAAA--AATAT-T-AAGAGGGGTGA 99 |||||||||| ||||| | ||||||||| || |||||| ||||| | ||||| || || Sbjct 58 AAGATTTCTTTTTGTTTATTAGAAGATTT-TT-GGAAAATTAATATATAAAGAGAGGAGA 115 Query 100 AGGATTAATCGTAAGAAATGGTGGTGGAGGAGAATAGAAGCATGGAGGAAGGACTTCTTC 159 | ||||| |||||| | |||||| || ||| |||| ||||||||| ||||||||||||| Sbjct 116 A--ATTAAGCGTAAG-AGTGGTGGCGGGGGAAAATAAAAGCATGGAAGAAGGACTTCTTC 172 Query 160 GGCATGGAAACGACAGAGATGATCGTCGTATCACTGCTTGTGTTATCCTCAGCACTTTTG 219 |||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 173 GGCATGAAAACGACAGAGATGATCGTCGTATCACAGCTTGTGTTATCCTCAGCACTTTTG 232 Query 220 TCGCTGTTTGTAGTGCCTTCAGCTATGGATGTGCCGCTGGTTATACTTCAGGCGCTGAGA 279 | |||||||||||| ||||||||||||||||||| |||||||||||| |||||||| | Sbjct 233 TTGCTGTTTGTAGTTCCTTCAGCTATGGATGTGCTAATGGTTATACTTCCGGCGCTGAAA 292 Query 280 CTGCTATCATGAAGGAGTTAAACCTTTCTATGGCACAATTTTCAGCGTTTGGCTCCTTTA 339 |||| |||||||| |||||| ||||||||||||||||||||||||||||||| |||||| Sbjct 293 CTGCAATCATGAAAGAGTTAGACCTTTCTATGGCACAATTTTCAGCGTTTGGTTCCTTTT 352 Query 340 TGAA-TGTGGGGGGTGCGGTGGGGGCCTTGTTCAGCGGTCAATTGGCAGTCATCCTCGGC 398 |||| | |||| ||||||||||| || ||||| ||||||||||| ||||||||||| ||| Sbjct 353 TGAACT-TGGGAGGTGCGGTGGGAGCTTTGTTTAGCGGTCAATTAGCAGTCATCCTTGGC 411 Query 399 AGAAGACGAACGTTGTGGGCATGCGATTTTTTCTGCATTTTTGGCTGGCTCTCCATTGCT 458 ||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||| Sbjct 412 AGAAGACGAACGTTGTGGGCATGCGATTTGTTCTGCATTTTTGGTTGGCTCTCCATTGCT 471 Query 459 TTCGCAAAGAATGTCTTCTGGCTGGACTTGGGAAGAATTTCCTTGGGCATAGGAGTCGGC 518 || |||||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||| Sbjct 472 TTTGCAAAGAATGTCTTGTGGCTGGACTTGGGAAGAATTTCTTTAGGCATCGGAGTGGGC 531 Query 519 TTGATTAGCTACGTGGTCCCTGTCTATATTGCGGAAATCACTCCAAAACATGTTCGTGGC 578 |||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 532 TTGACTAGCTACGTGGTCCCTGTCTATATTGCGGAAATCACTCCTAAACATGTTCGTGGC 591 Query 579 GCATTTACTTCTTCAAACCAGCTTCTTCAAAACAGTGGAATTTCCCTAATTTAttttttt 638 |||||| || |||||| || |||||||||||||||||||||||| || ||||||||||| Sbjct 592 GCATTTTCTGCTTCAACCCTGCTTCTTCAAAACAGTGGAATTTCTCTGATTTATTTTTTC 651 Query 639 GGGACTGTAATTAATTGGCGGGTTCTGGCTGTTATAGGTGCAATTCCATGCATCCTTCAA 698 || |||||||||||||||||||||||||||||||||||||| ||||||| || ||| | Sbjct 652 GGAACTGTAATTAATTGGCGGGTTCTGGCTGTTATAGGTGCTCTTCCATGTTTCATTCCA 711 Query 699 ATGATCGGTATAT-TTTACATACCGGAATCTCCAAGATGGCTGGCTAAAATCGGTTTAGG 757 |||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||| || Sbjct 712 GTGATCGGTATATATTT-CATACCGGAATCACCAAGATGGTTGGCTAAAATCGGTTCAGT 770 Query 758 CAAAGAAGTAGAAAGTTCTTTGCATCGACTTAGAGGGAAAGATACTGATGTTTCAGGTGA 817 ||||||||||||| ||| ||||||| ||||||||||||||| |||||||||||| ||| Sbjct 771 TAAAGAAGTAGAAAACTCTCTGCATCGCCTTAGAGGGAAAGATGCTGATGTTTCAGATGA 830 Query 818 AGCAGCTGAAATTCAGGTTATGACAAAAATGCTTGAAGAAGATTCAAAGTCTAGTTTCTC 877 ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 831 AGCCGCTGAAATTCAGGTTATGACAAAAATGCTTGAAGAAGATTCAAAGTCCAGTTTTTG 890 Query 878 TGACATGTTTCAGAAGAAGTATAGACGAACTCTTGTGGTTGGAATTGGTTTAATGTTGAT 937 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 891 TGACATGTTTCAGAAGAAGTATAGACGAACTCTAGTGGTTGGAATTGGTTTAATGTTGAT 950 Query 938 ACAACAATTATCTGGAGCTAGTGGTATCACATATTATTCAAATGCCATATTTAGGAAAGC 997 ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 951 ACAACAATTATCTGGAGCTAGCGGTATCACATATTATTCAAATGCCATATTTAGAAAAGC 1010 Query 998 TGGCTTTTCAGAGAGACTTGGATCAATGATATTTGGTGTGTTCGTGATCCCAAAAGCTTT 1057 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1011 TGGCTTTTCAGAGAGACTTGGATCAATGATATTTGGTGTGTTCGTGATCCCAAAAGCTTT 1070 Query 1058 GGTTAGTCTGATTCTTGTGGATAAATGGGGAAGACGACCACTCCTATTGGCTTCTGCTAT 1117 |||| |||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1071 GGTTGGTCTGATTCTTGTGGATAGATGGGGAAGACGACCACTCCTATTGGCTTCTGCTGT 1130 Query 1118 TGGAATGTCCATCGGATCCTTGCTTATTGGAGTTAGCTTCACGTTACAGCAAATGAAT 1175 ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| Sbjct 1131 TGGAATGTCTATCGGATCCTTGCTTATTGGGGTTAGCTTCACGTTACAGGAAATGAAT 1188 Score = 375 bits (203), Expect = 5e-103 Identities = 268/300 (89%), Gaps = 2/300 (1%) Strand=Plus/Plus Query 1176 GTCTACTTCGGATGTTTTGCATTCGGTATAGGAGGGCTACCTTGGGTCATTATGTCTGAG 1235 |||||||| |||| ||||||| ||||||||||||||||||||||| |||||||||||||| Sbjct 1234 GTCTACTTTGGATTTTTTGCAATCGGTATAGGAGGGCTACCTTGGATCATTATGTCTGAG 1293 Query 1236 ATCTTTCCGATAAATATAAAAGTTTCAGCAGGAACAATAGTAGCATTAACATCATGGACT 1295 || ||||||||||||||||||||||||||||| |||| || ||||||||||| ||||| Sbjct 1294 ATATTTCCGATAAATATAAAAGTTTCAGCAGGGTCAATCGTTGCATTAACATCGTGGACC 1353 Query 1296 AGTGGGTGGTTCGTGAGTTACGCTTTCAACTTTATGTTTGAATGGAGCGCACAAGGAACA 1355 | |||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| Sbjct 1354 ACTGGGTGGTTCGTTAGTTATGGTTTCAACTTTATGTTTGAATGGAGCGCACAAGGAACC 1413 Query 1356 TTTTACATATTTGCGGCTG-TCGGAGGAATGTCATTGATTTTTATTTGGATGGTCGTACC 1414 ||||||||||||||| || | || ||| |||||||| ||||||| |||||| |||| || Sbjct 1414 TTTTACATATTTGCGA-TGGTGGGGGGATTGTCATTGCTTTTTATATGGATGCTCGTGCC 1472 Query 1415 GGAAACCAAAGGACAGTCACTGGAAGAGTTGCAAGCTTCGCTTACCGGGACAACCTAAAT 1474 |||||||||||||||||| || ||||| |||||||| || ||||| |||||||||||||| Sbjct 1473 GGAAACCAAAGGACAGTCGCTTGAAGAATTGCAAGCATCCCTTACGGGGACAACCTAAAT 1532 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 77911245840 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5