BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478103 Length=2482 Score E Sequences producing significant alignments: (Bits) Value AT3G07700.3 | Symbols: | Protein kinase superfamily protein | ... 2798 0.0 > AT3G07700.3 | Symbols: | Protein kinase superfamily protein | chr3:2459497-2463965 REVERSE LENGTH=2677 Length=2677 Score = 2798 bits (1515), Expect = 0.0 Identities = 1663/1733 (96%), Gaps = 15/1733 (1%) Strand=Plus/Plus Query 1 AAGGACGACACCATTACGCAACTTAGTCCTCTT---TCTCTCTCTGTGGACTCTGTTCCA 57 ||||||||||||||||||||||||||||||||| ||||||||| | |||||||||||| Sbjct 128 AAGGACGACACCATTACGCAACTTAGTCCTCTTACCTCTCTCTCTCTCGACTCTGTTCCA 187 Query 58 AGAAAATCATCTACTTAATAATAGCTGATTTTACAGATTCCTGCAACGAAATTTCTGGGT 117 ||||| || |||||||||| | |||||||| ||||||||||||| ||||||||||||||| Sbjct 188 AGAAATTCCTCTACTTAAT-ACAGCTGATTCTACAGATTCCTGCTACGAAATTTCTGGGT 246 Query 118 CTGGGTTGATCTCTGTCTCACCAGTCAACCCAATTCAGGACTCTAATAAAGGTGGAAATG 177 |||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||| Sbjct 247 CTGGGTTGATCTTTGTCTCACCAGTCAACCCAATTCAGGACTTTGATAAAGGTGGAAATG 306 Query 178 GCGGCGTTATTAGCTTCTCAGAGCTGCTGCTATGGTGGTGAGACCGCAAGAATCACCAAA 237 ||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| Sbjct 307 GCGGCTTTATTAGCTTCTCAGAGCTGCTGCTATGGCGGTGAGACCGCAAGAGTCACCAAA 366 Query 238 GCTATTGGTTTCAGTGGCTCTGTAGAGAACCCTTTCACTGGGGAAGCTACTCAGTGTTAT 297 ||||||||||||||| ||||| | ||||| | ||||||||||||||| |||||||||||| Sbjct 367 GCTATTGGTTTCAGTAGCTCTTTGGAGAATCATTTCACTGGGGAAGCCACTCAGTGTTAT 426 Query 298 GGCAGCAAGTCCAAGAGATTTCGTATTGAGATGAGACAGTCGGAACCCCCCTCAAAGGTT 357 ||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 427 GGCAGCAAGTCTAAGAGATTTCGTATTGAGATGAGACAGTCGGAATTGCCCTCTAAGGTT 486 Query 358 GGAATCAATGGACGTTCAGTCAAAATGGTTCCTGCGACTGAGGTGGTGAAAAGGAAAGAT 417 ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 487 GGAATCAATGGACGTTCAGTCAAAATGGTTCCTGCGAGTGAGGTGGTGAAGAGGAAAGAT 546 Query 418 GGTGTGAATAATGTAAATGGATCAGC-GGTGAAAGGTGTTAATGGAGCGAGTTTGGTTAG 476 | ||| || |||||||| || || |||||||||||||||||||||||||||||| Sbjct 547 -G-GTG-----TG--AATGGATCGGCTGG-GAAAGGTGTTAATGGAGCGAGTTTGGTTAG 596 Query 477 TAGTAGAAACATTAATGGTGCGCCGTCAACTTTGGTTAAGGCACCAAAGAAAACAACAGG 536 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 597 TAGTAGAAACATTAATGGTGCGGCGTCAACTTTGGTTAAGGCACCAAAGAAAACAACAGA 656 Query 537 ATCTTACCTTCCTCCACCGGTTGAAGGAGTTAGGGTTCTTCCTTCTGATGAAGGATTTAG 596 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 657 ATCGTACCTTCCTCCACCGGTTGAAGGAGTTAGGGTTCTTCCTTCTGATGAAGGTTTTAG 716 Query 597 CTGGGCTGATGAGAATTACAGCTCACTTCAACGGAGTATTGATGTTTGGTCGTTTGTTAT 656 |||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||||| Sbjct 717 CTGGGCTGATGAGAATTATAGCTCACTTCAACGCAGTATTGATGTTTGGTCATTTGTTAT 776 Query 657 TTCCCTGAGGATTCGTGTCTTGTTCGACAATGCAAAATGGGCTTATGTTGGAGGATTCAC 716 |||||||||||||||| |||||||||| ||| | |||||||||||||||||||||||||| Sbjct 777 TTCCCTGAGGATTCGTATCTTGTTCGATAATTCGAAATGGGCTTATGTTGGAGGATTCAC 836 Query 717 AGAAGAAAAACAGAAAAGCCGAAGAAGAGAAACAGCTTCATGGTTGAGAGAGAGTGTATT 776 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 837 AGAAGAAAAACAGAAAAGCAGAAGAAGAGAAACAGCTTCATGGTTGAGAGAGAGTGTATT 896 Query 777 GCAGCTTGGTCCAACGTTTATCAAACTGGGACAGTTGTCTTCAACTAGGTCGGACTTGTT 836 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 897 GCAGCTTGGTCCAACGTTTATCAAACTGGGACAGTTGTCTTCAACTAGGTCAGACTTGTT 956 Query 837 TCCACGCGAATTCGTGGATGAGCTTTCCAAATTGCAGGACAGAGTCCCGGCTTTTTCTCC 896 ||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| Sbjct 957 TCCGCGCGAATTCGTGGATGAGCTTTCCAAGTTGCAGGACAGAGTCCCCGCTTTTTCTCC 1016 Query 897 AGAGAAAGCAAAGCGCTTCATTGAGGCTGAACTTGGGGCTCCTATTAGTGTAATGTTTAA 956 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1017 AGAGAAAGCAAAGCGCTTCATTGAGGCTGAACTTGGGGCTCCTATTAGTGTAATGTATAA 1076 Query 957 AGAATTTGAAGAGCAACCCATAGCTGCAGCTAGCCTTGGTCAGGTACACAGAGCTGTGTT 1016 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1077 AGAATTTGAAGAGCAACCCATAGCTGCAGCTAGCCTTGGTCAGGTACACAGAGCTGTTTT 1136 Query 1017 GCACAATGGCGAGAAAGTGGTAGTAAAAGTACAAAGACCCGGACTAAAGAAACTTTTCGA 1076 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1137 GCACAATGGCGAGAAAGTGGTAGTAAAAGTACAAAGACCCGGACTAAAGAAACTTTTCGA 1196 Query 1077 TATCGATTTACGAAATCTGAAGCTGATTGCCGAGTATTTCCAGAAAAGTGAATCATTTGG 1136 ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1197 TATTGATCTACGAAATCTGAAGCTGATTGCCGAGTATTTCCAGAAAAGTGAATCATTTGG 1256 Query 1137 TACAAACGATTGGGTTGGTATTTATGAAGAATGTGCCTCAATTTTGTATAAAGAGATTGA 1196 ||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| Sbjct 1257 TACAAACGATTGGGTTGGTATCTATGAAGAATGTGCCTTAATTTTGTATCAAGAGATTGA 1316 Query 1197 CTACATAAACGAAGCTAAGAACGCTGACAGATTCCGGAGAGACTTCCGGAATATAAACTG 1256 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1317 CTACATAAACGAAGCTAAGAACGCTGACAGATTCCGGAGAGACTTCCGGAATATAAACTG 1376 Query 1257 GGTCCGCGTACCTTTGGTTTATTGGGATTACTCTGCCATGAAGGTCTTGACTTTGGAGTA 1316 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1377 GGTCCGCGTACCTTTGGTTTATTGGGATTACTCTGCCATGAAGGTCTTGACTTTGGAGTA 1436 Query 1317 TGTACCAGGTGTTAAGATCAACAACTTGGACGCCTTAGCTGCACGGGGTTTTAACCGTTC 1376 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1437 TGTACCAGGTGTTAAGATCAACAACTTGGACGCCTTAGCTGCACGGGGTTTTAACCGTTC 1496 Query 1377 TAGAATCGCATCACGGGCCATTGAAGCTTATCTTATCCAGATACTCAAAACCGGCTTCTT 1436 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1497 TAGAATCGCATCACGGGCCATTGAAGCTTATCTTATACAGATACTCAAAACCGGCTTCTT 1556 Query 1437 TCATGCGGATCCGCACCCAGGAAACCTTGCAATTGATGTAGATGAATCGATCATCTACTA 1496 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1557 TCATGCGGATCCGCACCCAGGAAACCTTGCAATTGATGTAGATGAATCAATCATCTACTA 1616 Query 1497 TGACTTTGGCATGATGGGAGAGATCAAAACATTTACTCGGAAGAGATTGCTTGATCTCTT 1556 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1617 TGACTTCGGCATGATGGGAGAGATCAAAACATTTACTCGGAAGAGATTACTTGATCTCTT 1676 Query 1557 CTATTCTGTTTATGAAAAAGATGCAAAAAAGGTCATGCAAAACCTTATAGACCTTGAAGC 1616 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1677 CTATTCTGTTTATGAAAAAGATGCAAAAAAGGTCATGCAAAACCTTATAGACCTTGAAGC 1736 Query 1617 ACTTCAACCCACTGGAGATCTTTCTTCGGTAAGGAGATCTGTTCAGTTTTTCTTGGACAA 1676 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 1737 ACTTCAACCCACTGGAGATCTTTCATCGGTAAGGAGATCTGTTCAGTTTTTCTTGGACAA 1796 Query 1677 CCTATTAAGCCAATCACCAGATCAGCAACAGACTTTGGCAGCTATTGGAGAGG 1729 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1797 CCTATTAAGCCAATCACCAGATCAGCAACAGACTTTGGCAGCTATTGGAGAGG 1849 Score = 1088 bits (589), Expect = 0.0 Identities = 709/762 (93%), Gaps = 27/762 (4%) Strand=Plus/Plus Query 1727 AGGATCTGTTTGCAATTTCCCAGGATCAGCCATTCCGTTTCCCGTCAACTTTCACCTTTG 1786 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1934 AGGATCTGTTTGCAATTTCCCAGGATCAGCCATTCCGTTTCCCATCAACTTTCACCTTTG 1993 Query 1787 TCATCAGAGCATTTTCCACACTTGAGGGTATTGGTTACATCCTTGATCCAGATTTTTCCT 1846 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1994 TCATCCGAGCATTTTCCACACTTGAGGGTATTGGTTACATCCTTGATCCAGAATTTTCCT 2053 Query 1847 TTGTGAAGGTTGCTGCTCCTTATGCACAGGAACTCCTGGATTTAAAACAAAGGCAGCGCT 1906 ||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||| |||| Sbjct 2054 TTGTGAAGGTTGCGGCTCCTTATGCGCAGGAACTCCTGGATCTAAAACAAAGGCAACGCT 2113 Query 1907 CGGGTACTCAGCTTGTCCAAGAAATAAGGAAGCAGGCTGACGATGCCAGGTCTTCTACTC 1966 |||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| Sbjct 2114 CGGGAACTCAGCTTGTCCAAGAAATAAGAAAGCAGGCTGATGATGCCAGGTCTTCTACTC 2173 Query 1967 TGTCGATGCCATATCGAGTGCAGCGAATAGAAGAGTTTGTGAAAGAACTCGATTCAGGCG 2026 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2174 TGTCTATGCCATATCGAGTGCAGCGAATAGAAGAGTTTGTGAAAGAACTCGATTCAGGCG 2233 Query 2027 ATCTAAAACTCCGTGTTCGGGTTCTTGAGTCGGAAAGAGCAGCCCGGAAAGCGACAATTC 2086 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2234 ATCTGAAACTCCGTGTTCGGGTTCTTGAGTCGGAAAGAGCAGCCCGGAAAGCGACAATAC 2293 Query 2087 TGCAGATGGCGACAATGTATACAGTTCTTGGAGGAACTCTACTTAATATTGGGGTTACAT 2146 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2294 TGCAGATGGCGACGATGTATACAGTTCTTGGAGGAACTCTACTTAATATTGGGGTTACAT 2353 Query 2147 TTAGCAACCAAGGAAGTCAGCTTGTTGCCAATGGATCCTTCATTGGAGCAGGGATATTCA 2206 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2354 TTAGCAACCAAGGAAGTCAGCTTGTTGCCAATGGATCCTTCATTGGAGCAGGGATATTCA 2413 Query 2207 TGGCATTGGTACTGAGGTCTATGCAAAGAGTAAATAAGCTTGATAAGTTTGAGAAGATGA 2266 || |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 2414 TGTTATTGGTACTGAGGTCTATGCAAAGGGTAAATAAGCTTGATAAATTTGAGAAGATGA 2473 Query 2267 TATGATGATGACTGGTGG--------ATAGTTTATTCTTTTGAAGCTCCAAATATCAGAT 2318 |||||||||||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 2474 TATGATGATGACTGGTGGTCTGGTGGATAGTTTATTCTTTTAAAGCTCCAAATATCAGAT 2533 Query 2319 ATAGAATTGTGATGTATAGCCGTATAGATATAGCATGTATCTTTTAGCTCCCAGATTCAT 2378 |||||||| || || || | ||||| |||||||||||||||| |||||||| | || Sbjct 2534 ATAGAATT-TG-TG-AT-G---TATAGGTATAGCATGTATCTTT-AGCTCCCATA--CAC 2583 Query 2379 AATATTTATAAATTGTATAAAAACACTGTTATTCTCAACAATAAAAGGAAGGTCAAAGAT 2438 |||||||||||||||||||||||| |||| | || || | || |||| ||||||||| Sbjct 2584 AATATTTATAAATTGTATAAAAAC--TGTT-T-CT-AAGGA-AA--GGAAAGTCAAAGAT 2635 Query 2439 ATA-TATGAGACTGAGTTTCACTAGAAAGTACACAACTTTTA 2479 ||| |||||||||||||||||||| ||||||||||||||||| Sbjct 2636 ATAATATGAGACTGAGTTTCACTATAAAGTACACAACTTTTA 2677 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 123159845065 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5