BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478157
Length=1531
Score E
Sequences producing significant alignments: (Bits) Value
AT3G08580.1 | Symbols: AAC1 | ADP/ATP carrier 1 | chr3:2605442-... 2204 0.0
AT5G13490.1 | Symbols: AAC2 | ADP/ATP carrier 2 | chr5:4335467-... 1166 0.0
> AT3G08580.1 | Symbols: AAC1 | ADP/ATP carrier 1 | chr3:2605442-2607573
REVERSE LENGTH=1460
Length=1460
Score = 2204 bits (1193), Expect = 0.0
Identities = 1320/1381 (96%), Gaps = 10/1381 (1%)
Strand=Plus/Plus
Query 153 AGAGTTCAAAATGGTTGATCAAGTTCAGCACCCCACTATTGCGCAGAAAGCTGCTGGGCA 212
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 41 AGAGTTCAAAATGGTTGATCAAGTTCAGCACCCCACTATTGCGCAGAAAGCTGCCGGGCA 100
Query 213 GTTCATGCGTTCAAGTGTTTCCAAGGACGTCCATGTGGGTTACCAGAGGCCTTCTATGTA 272
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 101 GTTCATGCGTTCAAGTGTTTCCAAGGACGTTCAAGTGGGTTACCAGAGGCCTTCTATGTA 160
Query 273 CCAGAGACATGCAACCTATGGAAACTACTCCAATGCTGCATTCCAATTTCCTCCCACATC 332
|| |||||||||||||| ||||||||||||||||||||||| ||||||||| || | |
Sbjct 161 TCAAAGACATGCAACCTACGGAAACTACTCCAATGCTGCATTTCAATTTCCT-CC-GA-C 217
Query 333 ATCCCGGATGCTGGCAACTACTGCTTCTCCTGTGTTTGTTCAAACTCCTGGAGAGAAAGG 392
|||||||||| ||||||| ||||||||||| |||||||| ||||| || |||||||| ||
Sbjct 218 ATCCCGGATGTTGGCAACAACTGCTTCTCCCGTGTTTGTCCAAACCCCAGGAGAGAAGGG 277
Query 393 GTTCACTAACTTTGCCCTTGACTTTCTGATGGGTGGTGTTTCTGCTGCCGTCTCAAAGAC 452
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 278 GTTCACTAACTTTGCCCTTGACTTTCTGATGGGTGGTGTTTCTGCTGCCGTCTCCAAGAC 337
Query 453 TGCTGCTGCTCCTATTGAGCGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGATTAA 512
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 338 TGCTGCTGCTCCTATTGAACGTGTTAAGCTTTTGATCCAGAACCAGGATGAGATGATTAA 397
Query 513 AGCTGGCAGACTTTCTGAACCTTACAAGGGTATTGGTGACTGTTTCGGTAGGACCATAAA 572
||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||
Sbjct 398 AGCTGGCAGGCTTTCTGAACCCTACAAGGGTATTGGTGACTGTTTCGGCAGGACGATTAA 457
Query 573 GGATGAAGGGTTTGGTTCTCTATGGAGAGGAAACACTGCCAATGTCATCCGTTACTTCCC 632
||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 458 GGATGAAGGTTTTGGTTCTCTATGGAGAGGAAACACTGCCAATGTTATCCGTTATTTCCC 517
Query 633 CACTCAGGCCTTGAACTTTGCCTTCAAAGATTACTTCAAAAGGCTTTTCAACTTCAAGAA 692
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct 518 CACTCAGGCCTTGAACTTTGCCTTCAAAGATTACTTCAAAAGACTTTTCAACTTTAAGAA 577
Query 693 GGACAGGGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGAGGAGCAGCTGG 752
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 578 GGACAGAGATGGTTACTGGAAGTGGTTTGCTGGTAACTTGGCATCTGGAGGAGCAGCTGG 637
Query 753 TGCCTCTTCCCTTCTCTTTGTGTATTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGA 812
||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 638 TGCCTCTTCCCTTCTGTTTGTGTACTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGA 697
Query 813 TGCCAAGGCTGCAAAGAAAGGAGGTGGTGGCAGACAGTTTGATGGTCTTGTTGATGTCTA 872
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 698 TGCCAAGGCTGCAAAGAAAGGAGGTGGTGGAAGACAGTTTGATGGTCTTGTTGATGTCTA 757
Query 873 CAGAAAGACACTCAAGACTGATGGTATTGCTGGTCTATACCGTGGATTCAACATCTCCTG 932
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||
Sbjct 758 CAGAAAGACACTTAAGACTGATGGTATTGCTGGTCTGTACCGTGGATTCAACATCTCATG 817
Query 933 TGTTGGTATCATTGTCTACCGTGGTCTGTACTTTGGACTCTATGACTCTGTGAAGCCTGT 992
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 818 TGTTGGTATCATTGTCTACCGTGGTCTGTACTTTGGACTCTATGACTCTGTGAAGCCTGT 877
Query 993 TCTCCTCACTGGAGACTTACAGGACAGTTTCTTCGCTAGTTTCGCTCTTGGATGGGTTAT 1052
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 878 TCTCCTCACTGGTGACTTACAGGACAGTTTCTTCGCTAGTTTCGCTCTTGGATGGGTTAT 937
Query 1053 TACCAACGGTGCGGGGCTTGCATCCTACCCCATTGACACTGTCCGCAGAAGAATGATGAT 1112
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 938 TACCAATGGTGCGGGTCTTGCATCCTACCCCATTGACACTGTCCGCAGAAGAATGATGAT 997
Query 1113 GACGTCTGGTGAAGCAGTCAAGTACAAGAGTTCGTTGGACGCCTTCACCCAGATCCTCAA 1172
||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 998 GACGTCTGGTGAAGCTGTCAAGTACAAGAGTTCTTTGGACGCCTTCAAGCAGATCCTCAA 1057
Query 1173 GAACGAAGGAGCCAAGTCACTCTTCAAGGGAGCTGGTGCCAACATTCTGCGTGCTGTTGC 1232
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1058 GAATGAAGGAGCCAAGTCACTCTTCAAGGGAGCTGGTGCCAACATTCTGCGTGCTGTTGC 1117
Query 1233 AGGTGCTGGTGTGCTTTCCGGTTACGACAAATTGCAGCTGATTGTCTTCGGTAAGAAGTA 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1118 AGGTGCTGGTGTGCTTTCCGGTTACGACAAATTGCAGCTGATTGTCTTCGGTAAGAAGTA 1177
Query 1293 CGGATCAGGAGGTGCTTAAGCATTGCTTCTTCTTC-TTTTTCCGATTTTAATTGCGGTTT 1351
||||||||||||||| |||||||||||||||| || ||||| ||||||||||||||||||
Sbjct 1178 CGGATCAGGAGGTGCCTAAGCATTGCTTCTTCCTCCTTTTTTCGATTTTAATTGCGGTTT 1237
Query 1352 TAAGACCCGCAAGAAACTGAGATGTTGATGAAAttttttttGCTTAAGACTTAGGGAGGC 1411
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1238 TAAGGCCCGCAATAAACTGAGATGTTGATGAAATTTTTTTTGCTTAAGACTTAGGGAGGC 1297
Query 1412 ATGTGCCCTAAACCAAATTTTATATCCTTCTGACGCCAACttttttttttttACTTATGG 1471
|||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1298 ATGTGCCCTAAACCAAATTTTATATCGTTCTGACGCCAACTTTTTTT-----ACTTATGG 1352
Query 1472 AATAATTCGTGTTTGAGAGAGTTA-TTAGACTCTTCGATTTAAAAGAATTTTGGATTTAT 1530
|||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||||
Sbjct 1353 AATAATTCATGTTTGAGAGAGTTTGTTAGACTCTTCGATTTTAAAGAATTTTGGATTTAT 1412
Query 1531 G 1531
|
Sbjct 1413 G 1413
> AT5G13490.1 | Symbols: AAC2 | ADP/ATP carrier 2 | chr5:4335467-4337628
FORWARD LENGTH=1516
Length=1516
Score = 1166 bits (631), Expect = 0.0
Identities = 1016/1198 (85%), Gaps = 41/1198 (3%)
Strand=Plus/Plus
Query 141 CCATCGA--TTCTTAGA-GTTCAAAATGGTTGATCAAG-TTCAGCACCCCACTATTGC-G 195
||||||| |||||||| ||| ||||||||||| | || |||||||||||| ||| |
Sbjct 86 CCATCGATTTTCTTAGAGGTT-AAAATGGTTGAAC-AGACTCAGCACCCCACGATT-CTT 142
Query 196 CAGAAAGCTGCTGGGCAGTTCATGCGTTCAAGTGTTTC-CAAGG--A--CGT--CCATG- 247
||||| | | |||| || || || | || |||||||| | ||| | ||| |||
Sbjct 143 CAGAAGGTTTCTGGCCAACTCTTGAGCTCGAGTGTTTCTC-AGGACATTCGTGGTTATGC 201
Query 248 -T-GGGTTACC-AGAGGCCTTCTATGTACCAGAGACATGCAACCTATGGAAACTACTCCA 304
| || || || | |||||| ||| ||||||| ||||||| | || |||||||||||||
Sbjct 202 TTCGGCTT-CCAAAAGGCCTGCTACATACCAGAAACATGCAGCTTACGGAAACTACTCCA 260
Query 305 ATGCTGCATTCCAATTTCCTC---CCACAT-CATCCCGGATGCTGGCAACTACTGCTTCT 360
|||||||||| |||| ||||| | | |||| | ||| | ||||||||| |||||
Sbjct 261 ATGCTGCATTTCAATATCCTCTTGTGGC-TGCATCTCAGAT--T-GCAACTACTACTTCT 316
Query 361 CCTGTGTTTGTTCAAACTCCTGGAGAGAAAGGG-TTCACTAACTTTGCCCTTGACTTTC- 418
||||||||||| ||| |||| |||||| ||||| || ||||||||||| |||| ||||
Sbjct 317 CCTGTGTTTGTCCAAGCTCCAGGAGAG-AAGGGATTTACTAACTTTGCTATTGA-TTTCA 374
Query 419 TGATGGGTGGTGTTTCTGCTGCCGTCTCAAAGACTGCTGCTGCTCCTATTGAGCGTGTTA 478
|||||||||||||||||||||| || |||||||||||||||||||| ||||||||||| |
Sbjct 375 TGATGGGTGGTGTTTCTGCTGCTGTGTCAAAGACTGCTGCTGCTCCCATTGAGCGTGTCA 434
Query 479 AGCTTTTGATCCAGAACCAGGATGAGATGATTAAAGCTGGCAGACTTTCTGAACCTTACA 538
|||||||||| || ||||||||||||||| |||| ||||| || ||| |||| || ||||
Sbjct 435 AGCTTTTGATTCAAAACCAGGATGAGATGCTTAAGGCTGGAAGGCTTACTGAGCCATACA 494
Query 539 AGGGTATTGGTGACTGTTTCGGTAGGACCATAAAGGATGAAGGGT-TTGGTTC-TCTATG 596
|||||||| ||||||||||||| ||||| || | ||||||| ||| ||||||| | | ||
Sbjct 495 AGGGTATTCGTGACTGTTTCGGCAGGACAATTAGGGATGAA-GGTATTGGTTCGT-TGTG 552
Query 597 GAGAGGAAACACTGCCAATGTCATCCGTTACTTCCCCACTCAGGCCTTGAACTTTGCCTT 656
|||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct 553 GAGAGGAAACACCGCTAATGTTATCCGTTACTTCCCCACTCAGGCCTTGAACTTTGCATT 612
Query 657 CAAAGATTACTTCAAAAGGCTTTTCAACTTCAAGAAGGACAGGGATGGTTACTGGAAGTG 716
||||||||||||||| |||||||||||||||||||| |||| |||||| |||||||||||
Sbjct 613 CAAAGATTACTTCAAGAGGCTTTTCAACTTCAAGAAAGACAAGGATGGCTACTGGAAGTG 672
Query 717 GTTTGCTGGTAACTTGGCATCTGGAGGAGCAGCTGGTGCCTCTTCCCTTCTCTTTGTGTA 776
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 673 GTTTGCTGGTAACTTGGCATCTGGAGGTGCTGCTGGTGCCTCTTCCCTTCTCTTTGTGTA 732
Query 777 TTCCCTTGACTATGCCCGTACCCGTCTAGCTAATGA-TGCCAAGGCTGCAAAGAAAGGAG 835
|| ||||||||||| ||||||||||| || ||||| | ||||| |||| ||||| ||||
Sbjct 733 CTCTCTTGACTATGCACGTACCCGTCTTGCCAATGACT-CCAAGTCTGCCAAGAAGGGAG 791
Query 836 GTGGTGGCAGACAGTTTGATGGTCTTGTTGATGTCTACA-GAAAGACACTCAAGACTGAT 894
| |||| || ||||| ||||||||||||||||||||| ||| ||| |||||| | |||
Sbjct 792 GAGGTGAAAGGCAGTTCAATGGTCTTGTTGATGTCTACAAGAA-GACCCTCAAGTCAGAT 850
Query 895 GGTATTGCTGGTCTATACCGTGGATTCAACATCTCCTGTGTTGGTATCATTGTCTACCGT 954
||||||||||| || |||||||| ||||||||||| |||| |||||||||||||||||||
Sbjct 851 GGTATTGCTGGACTTTACCGTGGTTTCAACATCTCGTGTGCTGGTATCATTGTCTACCGT 910
Query 955 GGTCTGTACTTTGGACTCTATGACTCTGTGAAGCCTGTTCTCCTCACTGGAGACTTACAG 1014
||||| ||||||||||| || ||||||||||||||||| ||||||||||||||| | |||
Sbjct 911 GGTCTCTACTTTGGACTGTACGACTCTGTGAAGCCTGTCCTCCTCACTGGAGACCTGCAG 970
Query 1015 GACAGTTTCTTCGCTAGTTTCGCTCTTGGATGGGTTATTACCAACGGTGCGGGGCTTGCA 1074
|||||||||||||||||||| |||||||||||| | || ||||| |||||||| |||||
Sbjct 971 GACAGTTTCTTCGCTAGTTTTGCTCTTGGATGGCTCATCACCAATGGTGCGGGTCTTGCG 1030
Query 1075 TCCTACCCCATTGACACTGTCCGCAGAAGAATGATGATGACGTCTGGTGAAGCAGTCAAG 1134
|| ||||| |||||||| || | ||||||||||||||||| || |||||||| || |||
Sbjct 1031 TCGTACCCGATTGACACGGTTAGAAGAAGAATGATGATGACATCAGGTGAAGCGGTGAAG 1090
Query 1135 TACAAGAGTTCGTTGGACGCCTTCACCCAGATCCTCAAGAACGAAGGAGCCAAGTCACTC 1194
|||||||| || || || || ||| | |||||| | ||||| |||||||||||||| ||
Sbjct 1091 TACAAGAGCTCATTTGATGCGTTCTCACAGATCGTGAAGAAGGAAGGAGCCAAGTCTCTG 1150
Query 1195 TTCAAGGGAGCTGGTGCCAACATTCTGCGTGCTGTTGCAGGTGCTGGTGTGCTTTCCGGT 1254
|||||||| || ||||||||||| |||||||| ||||||||||||||||||||| | ||
Sbjct 1151 TTCAAGGGTGCGGGTGCCAACATCCTGCGTGCCGTTGCAGGTGCTGGTGTGCTTGCTGGC 1210
Query 1255 TACGACAAATTGCAGCTGATTGTCTTCGGTAAGAAGTACGGATCAGGAGGTGCTTAAG 1312
|||||||| ||||| | || |||||||| |||||||| ||||| |||||||| ||||
Sbjct 1211 TACGACAAGCTGCAGTTAATCGTCTTCGGCAAGAAGTATGGATCTGGAGGTGCCTAAG 1268
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 75551820225
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5