BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478159 Length=2004 Score E Sequences producing significant alignments: (Bits) Value AT3G08590.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosp... 2935 0.0 AT1G09780.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosp... 1500 0.0 > AT3G08590.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | chr3:2608471-2611418 REVERSE LENGTH=1986 Length=1986 Score = 2935 bits (1589), Expect = 0.0 Identities = 1762/1845 (96%), Gaps = 13/1845 (1%) Strand=Plus/Plus Query 170 GTTATGGGTAGCTCCGGCGACGTTAACTGGAAACTTGCGGACCACCCCAAGCTTCCCAAA 229 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 89 GTTATGGGTAGCTCCGGCGACGTTAACTGGAAACTTGCGGACCACCCCAAGCTTCCCAAA 148 Query 230 GGCAAAACCATCGGTTTAATTGTTCTTGATGGATGGGGTGAATCTGATCCTGATCAATAC 289 |||||||| |||||||| |||||||| ||||||||||||||||||||||| ||||||||| Sbjct 149 GGCAAAACTATCGGTTTGATTGTTCTCGATGGATGGGGTGAATCTGATCCCGATCAATAC 208 Query 290 AATTGCATCCATAAAGCTCCAACTCCTGCCATGGATTCCCTTAAAAAC-GGAAGACCCGA 348 ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct 209 AATTGCATCCATAAAGCTCCAACTCCTGCCATGGATTCCCTTAAAGACGGGAAG-CCCGA 267 Query 349 CACATGGAGGCTGATCAAAGCCCACGGTACTGCCGTTGGCCTCCCCAGCGAAGACGACAT 408 |||||||||| |||||||||| || ||||| |||||||| |||||||||||||||||||| Sbjct 268 CACATGGAGGTTGATCAAAGCTCATGGTACCGCCGTTGGTCTCCCCAGCGAAGACGACAT 327 Query 409 GGGAAACAGTGAAGTTGGCCACAATGCTCTCGGAGCTGGTCGAATTTACGCTCAAGGTGC 468 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 328 GGGAAACAGTGAAGTTGGCCACAATGCTCTTGGAGCTGGTCGAATTTACGCTCAAGGTGC 387 Query 469 TAAGCTTGTTGATCTCGCTCTTGCTTCTGGGAAAATCTATGAAGATGAAGGCTTCAAATA 528 |||||||||||||||||| |||||||| ||||||||||||||||||||||| |||||||| Sbjct 388 TAAGCTTGTTGATCTCGCCCTTGCTTCAGGGAAAATCTATGAAGATGAAGGTTTCAAATA 447 Query 529 CATCTCTCAATCTTTTGAGAAAGGCACTGTGCACCTTATTGGTCTTCTAAGCGATGGTGG 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 448 CATCTCTCAATCTTTTGAGAAAGGCACTGTGCACCTTATTGGTCTTCTAAGCGATGGTGG 507 Query 589 AGTTCACTCTCGTCTGGATCAAGTCCAGTTGCTGCTTAAGGGTTTTGCAGAACGAGGTGC 648 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 508 AGTTCACTCTCGTTTGGATCAAGTCCAGTTGCTGCTTAAGGGTTTTGCAGAACGTGGTGC 567 Query 649 TAAGAGAATCCGCGTCCATATTCTTACTGATGGGCGTGATGTTTTGGATGGTTCTAGTGT 708 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 568 TAAGAGAATCCGCGTCCATATTCTTACTGATGGTCGTGATGTTTTGGATGGTTCTAGTGT 627 Query 709 CGGATTTGTTGAAACTCTTGAAGCTGACCTCGCTGCTTTGCGTTCGAAAGGTGTTGACGC 768 |||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| || Sbjct 628 CGGATTTGTTGAAACTCTTGAAGCTGACCTAGCTGCTTTACGTGCGAAAGGTGTTGATGC 687 Query 769 TCAGGTTGCATCTGGTGGTGGTCGTATGTATGTCACAATGGACCGTTATGAGAATGATTG 828 |||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 688 TCAGGTTGCATCTGGTGGAGGTCGAATGTATGTCACAATGGACCGTTATGAGAATGATTG 747 Query 829 GAGTGTTGTTAAACGAGGTTGGGATGCACAAGTACTTGGAGAAGCTCCCCACAAATTCAA 888 ||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || Sbjct 748 GAGTGTTGTTAAACGAGGTTGGGATGCACAAGTCCTTGGGGAAGCTCCCCACAAATTTAA 807 Query 889 AAGTGCTCTTGAAGCAGTTAAGACACTGAGGGCCGAACCTGGTGCCAATGACCAGTATTT 948 ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 808 AAGCGCTCTTGAAGCAGTTAAGACACTGAGGGCAGAACCTGGTGCCAATGACCAGTATTT 867 Query 949 ACCTCCTTTTGTTATTGTTGATGATAGTGGAAAGGCTGTGGGTCCAATTGTTGATGGTGA 1008 ||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 868 GCCTTCGTTTGTTATTGTTGATGATAATGGAAAGGCTGTGGGTCCAATTGTTGATGGTGA 927 Query 1009 CGCAGTTGTGACATTCAATTTCCGTGCTGATCGAATGGTCATGCATGCAAAGGCCCTTGA 1068 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 928 CGCAGTTGTTACATTCAATTTCCGTGCTGATCGAATGGTCATGCATGCAAAGGCCCTCGA 987 Query 1069 ATATGAAGATTTCGATAAGTTTGATCGCGTACGAGTCCCTAAGATACGTTATGCAGGAAT 1128 ||| |||||||||| ||||||||||||||||| |||||| | ||||||||||||||||| Sbjct 988 ATACAAAGATTTCGACAAGTTTGATCGCGTACGTGTCCCTGATATACGTTATGCAGGAAT 1047 Query 1129 GCTCCAATATGATGGAGAGCTTAAGCTTCCTAGCCGCTATCTTGTTTCCCCACCATTGAT 1188 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1048 GCTCCAATATGATGGAGAGCTTAAGCTTCCTAGCCGCTATCTTGTTTCTCCACCATTGAT 1107 Query 1189 TGATAGAACTTCTGGTGAATATCTGGCACACAATGGCGTTCGTACTTTTGCTTGCAGTGA 1248 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1108 TGACAGAACTTCTGGTGAATATCTGGCACACAATGGCGTTCGTACTTTTGCTTGCAGTGA 1167 Query 1249 GACTGTAAAGTTTGGCCATGTAACCTTCTTTTGGAATGGCAACCGCTCTGGATATTTCAA 1308 |||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1168 GACTGTGAAGTTTGGCCATGTAACCTTCTTCTGGAATGGCAACCGCTCTGGATATTTCAA 1227 Query 1309 TGAAAAGTTAGAAGAGTATGTTGAGATTCCAAGTGATAGTGGAATATCATTCAATGTCCA 1368 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1228 TGAAAAGTTAGAAGAGTACGTTGAGATTCCAAGTGATAGTGGAATATCATTCAATGTCCA 1287 Query 1369 GCCAAAGATGAAAGCTCTGGAAATTGCCGAGAAGGCTAGGGATGCTATCCTTAGTGGCAA 1428 ||||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1288 GCCAAAGATGAAAGCACTGGAAATTGCCGAGAAAGCAAGGGATGCTATCCTTAGTGGCAA 1347 Query 1429 GTTTGACCAGGTGCGTGTCAACCTGCCAAATGGAGATATGGTGGGTCATACTGGTGATAT 1488 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 1348 GTTTGACCAGGTGCGTGTAAACCTGCCAAATGGAGATATGGTGGGGCATACTGGTGATAT 1407 Query 1489 TGAAGCAACTGTTGTTGCCTGTGAAGCTGCTGATCGTGCTGTGAGGACAATCCTTGATGC 1548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1408 TGAAGCAACTGTTGTTGCCTGTGAAGCTGCTGATCGTGCTGTGAGGACAATCCTTGATGC 1467 Query 1549 CATAGAACAGGTAGGAGGGATATACGTTGTGACTGCAGATCACGGAAATGCCGAGGACAT 1608 |||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1468 CATAGAACAGGTCGGAGGGATATACGTTGTGACTGCAGATCACGGAAATGCTGAGGACAT 1527 Query 1609 GGTTAAAAGGGACAAATCCGGCAAGCCAGCTCTCGATAAGGAAGGGAACCTTCAGATTCT 1668 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1528 GGTTAAAAGGGACAAATCCGGCAAGCCTGCTCTCGATAAGGAAGGGAACCTTCAGATTCT 1587 Query 1669 CACCTCTCACACCCTTAAACCAGTGCCAATTGCCATAGGAGGTCCTGGCTTGTCAGCAGG 1728 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1588 TACCTCTCACACCCTTAAACCAGTGCCAATTGCCATAGGAGGTCCTGGCTTGTCAGCAGG 1647 Query 1729 AGTTAGGTTCAGACAGGATATCGAGACACCTGGGCTTGCGAATGTAGCTGCGACAGTGAT 1788 ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1648 AGTTAGGTTTAGACAGGATATCGAGACACCTGGGCTTGCAAATGTAGCTGCGACAGTGAT 1707 Query 1789 GAACCTCCATGGCTTTGTAGCCCCG-GACGATTATGAGACAAGTCTGATTGAAGTTGTCG 1847 |||||||||||| ||||| |||||| | || ||||||||||||||||| ||||| |||| Sbjct 1708 GAACCTCCATGGATTTGTGGCCCCGAGT-GACTATGAGACAAGTCTGATCGAAGTCGTCG 1766 Query 1848 ACAAGTGATGATTCTTGTTGTTGTAGTTCCCTTTAAAT-TCCCACCTGAGCCTCTCTAGT 1906 | ||||||||||||||||||||||||||| |||||| |||||||||||||||| ||| Sbjct 1767 AGAAGTGATGATTCTTGTTGTTGTAGTTCTTTTTAAAAGTCCCACCTGAGCCTCTATAGA 1826 Query 1907 CTCTGATCCTCTTTTAAAGTTACTATTTTCACCGCTCTCTAATAAGGCTCGTGATTTTTG 1966 ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1827 CTCTGATTCTCTTTTAA-GTTACTATTTTCACCGCTCTCTAATAAGGCTCGTGATTTTTT 1885 Query 1967 GGGAGCCATACT-----C--GCCGGCCCTCTCACGATGTTGTTCA 2004 |||||||||||| | ||||||||||||||||||||||||| Sbjct 1886 GGGAGCCATACTGTATACTCGCCGGCCCTCTCACGATGTTGTTCA 1930 > AT1G09780.1 | Symbols: | Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent | chr1:3165370-3167869 REVERSE LENGTH=1911 Length=1911 Score = 1500 bits (812), Expect = 0.0 Identities = 1378/1652 (83%), Gaps = 36/1652 (2%) Strand=Plus/Plus Query 209 GACCACCCCAAGCTTCCCAAAGGCAAAACCATCGGTTTAATTGTTCTT-GATGGATGGGG 267 |||||||||||||| ||||| || || ||||||| |||| | |||| ||||| ||||| Sbjct 88 GACCACCCCAAGCTCCCCAAGGGTAAGACCATCGCCGTAATCG-TCTTAGATGGTTGGGG 146 Query 268 TGAATCTGATCCTGATCAATACAATTGCATCCATAAAGCTCCAACTCCTGCCATGGATTC 327 |||||||| |||||||| ||||| || ||||| || ||||||||||| ||||||||||| Sbjct 147 TGAATCTGCCCCTGATCAGTACAACTGTATCCACAACGCTCCAACTCCAGCCATGGATTC 206 Query 328 CCTTAAAAACGGAAGAC-CC-GACACATGGAGGCTGATCAAAGCCCACGGTACTGCCGTT 385 |||||| | || || | || || || |||| |||||||||| ||||||||||| || Sbjct 207 TCTTAAACATGG-AG-CTCCTGATACTTGGACTTTGATCAAAGCTCACGGTACTGCTGTA 264 Query 386 GGCCTCCCCAGCGAAGACGACATGGGAAACAGTGAAGTTGGCCACAATGCTCTCGGAGCT 445 || || || || ||||| || |||||||||||||| ||||| || |||||||| || ||| Sbjct 265 GGACTTCCTAGTGAAGATGATATGGGAAACAGTGAGGTTGGTCATAATGCTCTTGGTGCT 324 Query 446 GGTCGAAT-TTACGCTCAAGGTGCTAAGC-TTGTTGATCTCGCTCTTGCTTCTGGGAAAA 503 ||||| || || |||||||||||||||| ||| ||| | |||||||||||||| |||| Sbjct 325 GGTCGTATCTT-TGCTCAAGGTGCTAAGCTTTG-TGACCAAGCTCTTGCTTCTGGCAAAA 382 Query 504 TCTATGAAGATGAAGGCTTCAAATACATCTCTCAATCTTTTGAGAAAG-GCACTGTGCAC 562 ||| ||||| |||||| || |||||| | ||| ||||||| ||| | | ||| |||| Sbjct 383 TCTTTGAAGGTGAAGGTTTTAAATACGTTTCTGAATCTTTCGAG-ACGAATACTTTGCAT 441 Query 563 CTTATTGGTCTTCTAAGCGATGGTGGAGTTCACTCTCGTCTGGATCAAGTCCAGTTGCTG 622 ||| |||| ||||| || || |||||||||||||||||||| |||||| | |||||| || Sbjct 442 CTTGTTGGACTTCTCAGTGACGGTGGAGTTCACTCTCGTCTCGATCAACTACAGTTGTTG 501 Query 623 CTTAAGGGTTTTGCAGAACGAGGTGCTAAGAGAATCCGCGTCCATATTCTTACTGATGGG 682 |||| || | ||| ||||| ||||||||||||||| | |||||||||||||||||||| Sbjct 502 ATTAAAGGATCTGCTGAACGTGGTGCTAAGAGAATCAGAGTCCATATTCTTACTGATGGT 561 Query 683 CGTGATGTTTTGGATGGTTCTAGTGTCGGATTTGTTGAAACTCTTGAAGCTGACCTCGCT 742 |||||||||||||||||||||||||| |||||||| ||||| |||||||| ||||||| | Sbjct 562 CGTGATGTTTTGGATGGTTCTAGTGTTGGATTTGTGGAAACCCTTGAAGCCGACCTCGTT 621 Query 743 GCTTTGCGTTCGAAAGGTGTTGACGCTCAGGTTGCATCTGGTGGTGGTCGTATGTATGTC 802 || || ||| ||| ||||| || |||||| ||||||||||||| || ||||||||||| Sbjct 622 GCATTACGTGAGAATGGTGTGGATGCTCAGATTGCATCTGGTGGAGGACGTATGTATGTG 681 Query 803 ACAATGGACCGTTATGAGAATGATT-GGAGTGTTGTTAAACGAGGTTGGGATGCACAAGT 861 || ||||||| ||||||||||||| ||| ||||||||| ||||||||||||| ||||| Sbjct 682 ACTTTGGACCGATATGAGAATGATTGGGA-AGTTGTTAAAAGAGGTTGGGATGCTCAAGT 740 Query 862 ACTTGGAGAAGCTCCCCACAAATTCAAAAGTGCTCTTGAAGCAGTTAAGACACTGAGGGC 921 |||||||||||||| ||||||||||||| ||| ||||||| || ||||| ||||| Sbjct 741 TCTTGGAGAAGCTCCTCACAAATTCAAAAACGCTGTTGAAGCTGTGAAGACTTTGAGGAA 800 Query 922 CGAACCTGGTGCCAATGACCAGTATTTACCTCCTTTTGTTATTGTTGATG-AT-AGTGGA 979 || |||||||| |||||||||||||| || || ||||| |||||||||| || || ||| Sbjct 801 AGAGCCTGGTGCTAATGACCAGTATTTGCCCCCGTTTGTGATTGTTGATGAATCAG-GGA 859 Query 980 AAGGCTGTGGGTCCAATTGTTGATGGTGACGCAGTTGTGACATTCAATTTCCGTGCTGAT 1039 || || || ||||| ||||| || ||||| || ||||| || ||||| ||| | |||||| Sbjct 860 AA-GCAGTTGGTCCGATTGTGGACGGTGATGCTGTTGTTACCTTCAACTTCAGGGCTGAT 918 Query 1040 CGAATGGTCATGCATGCAAAGGCCCTTGAATATGAAGATTTCGATAAGTTTGATCGCGTA 1099 || ||||| |||||||| ||||| ||||| || |||||||| || || ||||| | ||| Sbjct 919 CGTATGGTTATGCATGCTAAGGCACTTGAGTACGAAGATTTTGACAAATTTGA-C-CGTG 976 Query 1100 CGA-GT-CCCTAAGATACGTTATGCAGGAATGCTCCAATATGATGGAGAGCTTAAGCTTC 1157 || || ||| ||||| |||||||| || ||||| || |||||||||||||||||||| | Sbjct 977 TGAGGTACCCAAAGATTCGTTATGCTGGTATGCTTCAGTATGATGGAGAGCTTAAGCTAC 1036 Query 1158 CTAGCCGCTATCTTGTTTC-CCCACCATTGATTGATAGAACTTCTGGTGAATATCTGGCA 1216 | ||||| || |||||||| ||| || |||||||||||| |||||||||||| || | Sbjct 1037 CAAGCCGTTACCTTGTTTCTCCC-CCGGAGATTGATAGAACATCTGGTGAATATTTGACT 1095 Query 1217 CACAATGGCGTTC-GTACTTTTGCTTGCAGTGAGACTGTAAAGTTTGGCCATGTAACCTT 1275 |||||||||| || |||||||||||||||||||||| || |||||||| ||||| ||||| Sbjct 1096 CACAATGGCG-TCAGTACTTTTGCTTGCAGTGAGACCGTCAAGTTTGGGCATGTCACCTT 1154 Query 1276 CTTTTGGAATGGCAACCGCTCTGGATATTTCAATGA-AAAGTTAGAAGAGTATGTTGAGA 1334 ||| |||||||| || || |||||||||||||| || ||| || || ||||||||||| | Sbjct 1155 CTTCTGGAATGGAAATCGATCTGGATATTTCAACGAGAAA-TTGGAGGAGTATGTTGAAA 1213 Query 1335 TTCCAAGTGATAGTGGAATATCATTCAATGTCCAGCCAAAGATGAAAGCTCTGGAAATTG 1394 | |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1214 TCCCAAGTGACAGTGGAATATCATTCAATGTCCAGCCAAAGATGAAAGCTCTGGAAATTG 1273 Query 1395 CCGAGAAGGCTAGGGATGCTATCCTTAGTGGCAAGTTTGACCAGGTGCGTGTCAACCTGC 1454 |||||||| |||||||| |||||||||||||||||||| |||||||| || ||| | | Sbjct 1274 GTGAGAAGGCAAGGGATGCAATCCTTAGTGGCAAGTTTGATCAGGTGCGAGTTAACATTC 1333 Query 1455 CAAATGGAGATATGGTGGGTCATACTGGTGATATTGAAGCAACTGTTGTTGCCTGTGAAG 1514 ||||||||||||||||||||||||| |||||||||||||| || |||||||| || || | Sbjct 1334 CAAATGGAGATATGGTGGGTCATACAGGTGATATTGAAGCCACGGTTGTTGCATGCGAGG 1393 Query 1515 CTGCTGATCGTGCTGTGAGGACAATCCTTGATGCCATAGAACAGGTAGGAGGGA-TATAC 1573 ||||||||| |||||||| || || ||||||| || ||||| || | | ||| | || Sbjct 1394 CTGCTGATCTTGCTGTGAAGATGATTTTTGATGCAATCGAACAAGT-GAAAGGAATTTAT 1452 Query 1574 GTTGTGACTGCAGATCACGGAAATGCCGAGGACATGGTTAAAAGGGACAAATCCGGCAAG 1633 ||||||||||| ||||||||||| || ||||||||||| || ||||| ||||| |||||| Sbjct 1453 GTTGTGACTGCTGATCACGGAAACGCAGAGGACATGGTGAAGAGGGATAAATCTGGCAAG 1512 Query 1634 CCAGCTCTCGATAAGGAAGGGAACCTTCAGATTCTCACCTCTCACACCCTTAAACCAGTG 1693 || ||| | |||||||||||||| ||||||||||| ||||||||||| || || |||||| Sbjct 1513 CCTGCTTTGGATAAGGAAGGGAAGCTTCAGATTCTAACCTCTCACACACTCAAGCCAGTG 1572 Query 1694 CCAATTGCCATAGGAGGTCCTGGCTTGTCAGCA-GGAGTTAGGTTCAG-ACAGGATATCG 1751 |||||||| || ||||||||||| ||| | || ||||| || ||| | | || || | | Sbjct 1573 CCAATTGCTATTGGAGGTCCTGGTTTGGCT-CAAGGAGTGAGATTCCGTAAAG-ATCTGG 1630 Query 1752 AGACACCTGGGCTTGCGAATGTAGCTGCGACAGTGATGAACCTCCATGGCTTTGTAGC-C 1810 | ||||| |||||||| ||||||||||| |||||||||||||||||||| ||||| || | Sbjct 1631 AAACACCGGGGCTTGCAAATGTAGCTGCAACAGTGATGAACCTCCATGGATTTGTGGCTC 1690 Query 1811 CCGGACGATTATGAGACAAGTCTGATTGAAGT 1842 || || |||||| | | ||||||||||| Sbjct 1691 CCTCT-GACTATGAGCCCACCCTGATTGAAGT 1721 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 99296678010 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5