BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478355
Length=2177
Score E
Sequences producing significant alignments: (Bits) Value
AT5G04130.1 | Symbols: GYRB2 | DNA GYRASE B2 | chr5:1121828-112... 2102 0.0
AT3G10270.1 | Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173580-317... 1958 0.0
> AT5G04130.1 | Symbols: GYRB2 | DNA GYRASE B2 | chr5:1121828-1128091
REVERSE LENGTH=2515
Length=2515
Score = 2102 bits (1138), Expect = 0.0
Identities = 1711/1985 (86%), Gaps = 49/1985 (2%)
Strand=Plus/Plus
Query 12 CCAAGAGAGCT-CTACCTCTAAGGATTATAGTTCCGAGCACATCCAAGTGTTGGAAGGCT 70
|||||||| || | || ||||||| ||| ||||| || || || |||||| |||||||||
Sbjct 306 CCAAGAGA-CTACCACATCTAAGGGTTACAGTTCTGAACAGATTCAAGTGCTGGAAGGCT 364
Query 71 TAGATCCTGTCAGGAAAA-GACCTGGAATGTATATTGGTAGCACCGGATCTCGTGGTTTG 129
|||| ||||| | ||||| | || ||||||||||| || ||||| |||||||||||||||
Sbjct 365 TAGACCCTGT-AAGAAAACGTCCAGGAATGTATATCGGAAGCACTGGATCTCGTGGTTTG 423
Query 130 CACCATCTGGTTTATGAGATCCTTGACAACGCAATTGACGAGGCCCAAGCTGGTTTTGCT 189
|| ||| ||||||||||||| ||||||||||||||||| ||||| |||||||||| |||
Sbjct 424 CATCATTTGGTTTATGAGATACTTGACAACGCAATTGATGAGGCTCAAGCTGGTTATGCC 483
Query 190 TCAAAGATTGACGTTGTTTTACATTCAGATGATTCAGTCAGCATT-TCAGACAATGGACG 248
|||||| |||| || || ||||| |||||| ||||| || || | |||||||| ||
Sbjct 484 TCAAAGGTTGATGTCGTCCTACATGCAGATGGCTCAGTTAGTGTTGT-GGACAATGGGCG 542
Query 249 TGGGATACCCACAGATTTGCATCCTGCAACGGGAAAA-TCGGCTTTGGAAACTGTCCTTA 307
|||||||||||| |||||||||||||| || |||| || | |||| ||||| ||||
Sbjct 543 TGGGATACCCACGGATTTGCATCCTGCGAC-AAAAAAGTCTTCCCTGGAGACTGTGCTTA 601
Query 308 CGGTCTTACATGCAGGG-GGTAAGTTTGGTGGCAAGAGTAGTGGGTACAGCGTGTCTGGT 366
|||| |||||||| ||| || ||||||||||||| ||||||||| ||||| |||||||||
Sbjct 602 CGGTTTTACATGC-GGGTGGCAAGTTTGGTGGCACGAGTAGTGGCTACAGTGTGTCTGGT 660
Query 367 GGATTGCATGGCGTAGGTTTATCAGTTGTGAATGCATTGTCAGAGGGAT-TGGAGGTTAT 425
||||| ||||| || ||||||||||| || ||||| ||||| || || | |||||| | |
Sbjct 661 GGATTACATGGTGTCGGTTTATCAGTAGTAAATGCTTTGTCTGA-GGCTCTGGAGG-TCT 718
Query 426 -TGTTCGCAGAGATGGGATGGAGTTTCAGCAGAAGTATTCTCGTGGAAAGCCTGTAACAA 484
||| | ||||||||||||||| | |||| || ||||||||||||||||| |||| |
Sbjct 719 CGGTTTGGAGAGATGGGATGGAGCATAAGCAAAATTATTCTCGTGGAAAGCCCATAACTA 778
Query 485 CACTTACATGTCATGTCCTCCCACC-AGAGTCAAGGGGGACTCAAGGGACATGCATCCGG 543
|||||||||||| |||||||| || |||||||| ||||||| |||||||| ||||| ||
Sbjct 779 CACTTACATGTCGCGTCCTCCC-CCTAGAGTCAAAGGGGACTAAAGGGACAAGCATCAGG 837
Query 544 TTTTGGCCTGACAAAGAAGGTTTTGCCTTATTCACAACTGCAATTC-AATTCGACCATAA 602
|||||||||||||||||| | || ||||||||||||| || | |||||||||||
Sbjct 838 TTTTGGCCTGACAAAGAA------G--TT-TTCACAACTGCAA-TCGAGTTCGACCATAA 887
Query 603 CACTATTGCTGGACGAATTAGGGAGCTTGC-TTTTCTAAATCCAAAGGTTACAATCTCTC 661
||| |||||||||||||||||||||||||| |||| | |||||||||||||| ||||||
Sbjct 888 CACCATTGCTGGACGAATTAGGGAGCTTGCATTTT-TGAATCCAAAGGTTACCATCTCTT 946
Query 662 TAAAAAAGGAGGATGATGATCCAGAAAGGGGCTTGTATAGTGAATA-TTTTTATGCTGGA 720
|||||||||||||||||||||| |||| | | ||||||||||| | ||| |||||||
Sbjct 947 TAAAAAAGGAGGATGATGATCCTGAAAAGACCCAATATAGTGAATACTCTTT-TGCTGGA 1005
Query 721 GGGTTAACTGAATATGTTAGCTGGCTAAATACTGATAAGAAACCGCTTCATGATGTGCTG 780
|| ||||||||||||||||| |||||||||||||||||||| || ||||||| ||||||
Sbjct 1006 GGATTAACTGAATATGTTAGTTGGCTAAATACTGATAAGAATCCAATTCATGACGTGCTG 1065
Query 781 GGTTTCAGAAAAGAGATAAATGGCT-CCACCGTTGACGTTTCACTTCAGTGGTGCTCAGA 839
|||||||| | |||||||||||| | ||||||| |||||| | ||||| |||||||||||
Sbjct 1066 GGTTTCAGGAGAGAGATAAATGG-TGCCACCGTGGACGTTGCCCTTCAATGGTGCTCAGA 1124
Query 840 TGCCTATTCAGACACGATGCTGGGATACGCGAATAGTATTCGGACCATTGATGGTGGGAC 899
||| ||||||||||| ||||||||||| || ||||| ||||| || ||||||||||| ||
Sbjct 1125 TGCATATTCAGACACAATGCTGGGATATGCCAATAGCATTCGCACTATTGATGGTGGAAC 1184
Query 900 ACATATAGAAGGTGTGAAGGCTTCATTAACAAGAACTCTAAATTCCCTTGCGAAAAAGTT 959
||| || ||||||||||| |||||||||||||| ||||| ||| ||||||| |||||||
Sbjct 1185 ACACATCGAAGGTGTGAAAGCTTCATTAACAAGGACTCTTAATACCCTTGCAAAAAAGTC 1244
Query 960 AAAGGTTATCAAGGA-AAAGGATATTAGCTTAAGTGGGGAACATGTTAGGGAGGGATTGA 1018
|||| | | ||||| ||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1245 AAAGACTGTTAAGGAGAAA-GATATTAGCTTAAGTGGGGAACATGTTAGAGAGGGATTGA 1303
Query 1019 CCTGCATTGTCTCAGTCAAGGTTCCTAACCCTGAGTTTGAAGGTCAAACAAAGACAAGAC 1078
|||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1304 CCTGTATCGTCTCAGTCAAGGTTCCTAATCCTGAGTTTGAAGGTCAAACAAAGACAAGAT 1363
Query 1079 TAGGAAATCCAGAGGTGAGAAAAATTGTTGATCAATCAGTCCAGGAATACCTCACGGAGT 1138
||||||||||||||||||||||||||||||| |||||||| |||||||| ||||| ||||
Sbjct 1364 TAGGAAATCCAGAGGTGAGAAAAATTGTTGACCAATCAGTTCAGGAATATCTCACAGAGT 1423
Query 1139 ACTTGGAATTGCATCCGGATGTACTTGAAAGCATTATTTCCAAAT-CCTTGAATGCATAC 1197
|||||||||||||| ||| | ||||| |||||||||||||||| |||| || || |||
Sbjct 1424 TTTTGGAATTGCATCCAGATATTCTTGAGAGCATTATTTCCAAATCCCTT-AACGCTTAC 1482
Query 1198 AAGGCTGCTCTGGCTGCCAAGAGGGCTAGGGAGTTGGTGAGATCAAAAAGCGTTTTGAAG 1257
||||||||| |||||||||||||||| ||||||||||| || || |||||||||||||||
Sbjct 1483 AAGGCTGCTTTGGCTGCCAAGAGGGCAAGGGAGTTGGTCAGGTCGAAAAGCGTTTTGAAG 1542
Query 1258 TCATCCTCACTTCCTGGGAAACTTGCAGATTGCTCATCTACAGATCCTGCAGAATCTGAG 1317
||||| ||||||||||||||||| || ||||||||||| |||||||||| || ||||||
Sbjct 1543 TCATCATCACTTCCTGGGAAACTGGCTGATTGCTCATCAACAGATCCTGAAGTATCTGAA 1602
Query 1318 ATTTTCATTGTCGAAGGAGATTCTGCTGGTGGCAGCGCGAAACAGGGTCGTGACAGGCG- 1376
||||| || || ||||||||||||||||||||||| ||||||||||| ||||| || ||
Sbjct 1603 ATTTTTATAGTTGAAGGAGATTCTGCTGGTGGCAGTGCGAAACAGGGCCGTGATAGACGA 1662
Query 1377 TTTCCAGGCGATTCTTCCTTTGAGAGGCAAAATTTTGAATATTGAGAGAAAGGATGAAGC 1436
||| ||||| ||||||||||||||||| |||||| |||| ||||| ||||||||||||||
Sbjct 1663 TTT-CAGGCAATTCTTCCTTTGAGAGGTAAAATTCTGAACATTGAAAGAAAGGATGAAGC 1721
Query 1437 AGCCATGTATAAGAACGAAGAAATTCAAAATCTAATTCTTGGCCTTGGTCTTGGAGTTAA 1496
||||||||||||||| |||||||||||||||||||||||||||||||| || || || ||
Sbjct 1722 AGCCATGTATAAGAATGAAGAAATTCAAAATCTAATTCTTGGCCTTGGCCTCGGTGTGAA 1781
Query 1497 GGGAGAAGATTTTAACAAGGAGAATCTGCGTTACCATAAAATTATCATCTTAACAGATGC 1556
||||||||||||||| || || ||| |||| |||||||| || |||||||||||||||||
Sbjct 1782 GGGAGAAGATTTTAAGAAAGAAAATTTGCGGTACCATAAGATAATCATCTTAACAGATGC 1841
Query 1557 AGATGTTGATGGTGCACATATCCGGACACTTCTGTTAACCTTTTTCTTCAGATATCAGAG 1616
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1842 AGATGTTGATGGTGCACATATCCGGACACTTCTGTTGACCTTTTTCTTCAGATATCAGAG 1901
Query 1617 AGCCTTGTTTGACGCGGGTTGCATATACGTTGGTGTTCCACCTCTTTTCAAGGTTGAGAG 1676
|||||||||||| || ||||||||||| || |||||||| ||||| ||||||||||| ||
Sbjct 1902 AGCCTTGTTTGATGCAGGTTGCATATATGTCGGTGTTCCTCCTCTGTTCAAGGTTGAAAG 1961
Query 1677 GGGGAAACAG-GCGCACTATTGCTACGATGATGCAG-CTCTTaaaaaaaTTACC-GCTT- 1732
||| ||| | || || |||||||| |||||||||| | |||||||| || ||| | |
Sbjct 1962 GGG-AAAGAATGCACAATATTGCTATGATGATGCAGAC-CTTAAAAAGATCACCAG-TAA 2018
Query 1733 CGTTCCCTGCAAACGCATCTTACAACATTCAGAGGTTCAAAGGTTTGGGTGAGATGATGC 1792
| ||||||||||||||||| ||||||||||| ||||||||||||||||| ||||||||||
Sbjct 2019 C-TTCCCTGCAAACGCATCCTACAACATTCAAAGGTTCAAAGGTTTGGGAGAGATGATGC 2077
Query 1793 CTGCGCAGCTATGGGAAACAACAATGAACCCAGATACAAGGATATTGAAGCAACTAGTTG 1852
||| ||||| |||||||| |||||||| ||||| ||||||||| | |||||||| ||||
Sbjct 2078 CTGAACAGCTTTGGGAAACGACAATGAATCCAGAAACAAGGATACTAAAGCAACTTGTTG 2137
Query 1853 TTGAGGACGCAGCAGAAACGAATATGGTC-TTCTCATCTCTGATGGGTGCTCGGGTGGAT 1911
| || || ||| ||| | || ||| | ||||||||||| |||||||||||||| |||
Sbjct 2138 TCGATGATATAGCGGAAGCAAACATGA-CATTCTCATCTCTTATGGGTGCTCGGGTCGAT 2196
Query 1912 GTCAGGAAGGAACTCATCAAAAGTGCTGCGACTAGGATGAATCTGGAGAATCTCGACATA 1971
||| |||| ||||||||||||| |||||| |||||||| || ||| || ||| ||||||
Sbjct 2197 GTCCGGAAAGAACTCATCAAAAATGCTGCAACTAGGATCAACCTGCAGCGTCTAGACATA 2256
Query 1972 TAACA 1976
|||||
Sbjct 2257 TAACA 2261
> AT3G10270.1 | Symbols: GYRB1 | DNA GYRASE B1 | chr3:3173580-3179786
REVERSE LENGTH=2574
Length=2574
Score = 1958 bits (1060), Expect = 0.0
Identities = 1164/1212 (96%), Gaps = 16/1212 (1%)
Strand=Plus/Plus
Query 973 GAAAAGGATATTAGCTTAAGTGGGGAACATGTTAGGGAGGGATTGACCTGCATTGTCTCA 1032
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1348 GAAAAGGATATTAGCTTAAGTGGGGAACATGTTAGGGAAGGATTGACCTGCATTGTCTCA 1407
Query 1033 GTCAAGGTTCCTAACCCTGAGTTTGAAGGTCAAACAAAGACAAGACTAGGAAATCCAGAG 1092
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1408 GTCAAGGTTCCGAACCCTGAGTTTGAAGGTCAAACAAAGACAAGACTAGGAAATCCAGAG 1467
Query 1093 GTGAGAAAAATTGTTGATCAATCAGTCCAGGAATACCTCACGGAGTACTTGGAATTGCAT 1152
||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 1468 GTGAGAAAAATTGTTGACCAATCAGTCCAGGAGTACCTCACGGAGTACTTGGAATTGCAT 1527
Query 1153 CCGGATGTACTTGAAAGCATTATTTCCAAATCCTTGAATGCATACAAGGCTGCTCTGGCT 1212
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1528 CCGGATGTACTTGAAAGCATTATTTCCAAATCCTTGAATGCGTACAAGGCTGCTCTGGCT 1587
Query 1213 GCCAAGAGGGCTAGGGAGTTGGTGAGATCAAAAAGCGTTTTGAAGTCATCCTCACTTCCT 1272
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1588 GCCAAGAGGGCTAGGGAGTTGGTAAGATCAAAAAGCGTTTTGAAGTCATCCTCACTTCCT 1647
Query 1273 GGGAAACTTGCAGATTGCTCATCTACAGATCCTGCAGAATCTGAGATTTTCATTGTCGAA 1332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1648 GGGAAACTTGCAGATTGCTCATCTACAGATCCTGCAGAATCTGAGATTTTCATTGTCGAA 1707
Query 1333 GGAGATTCTGCTGGTGGCAGCGCGAAACAGGGTCGTGACAGGCGTTTCCAGGCGATTCTT 1392
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1708 GGAGATTCGGCTGGTGGCAGCGCGAAACAGGGTCGTGACAGGCGTTTCCAGGCAATTCTT 1767
Query 1393 CCTTTGAGAGGCAAAATTTTGAATATTGAGAGAAAGGATGAAGCAGCCATGTATAAGAAC 1452
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1768 CCTTTGAGAGGCAAAATTTTGAATATTGAGAGAAAGGATGAAGCAGCAATGTATAAGAAC 1827
Query 1453 GAAGAAATTCAAAATCTAATTCTTGGCCTTGGTCTTGGAGTTAAGGGAGAAGATTTTAAC 1512
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1828 GAAGAAATTCAAAATCTTATTCTTGGCCTTGGTCTTGGAGTTAAGGGAGAAGATTTTAAC 1887
Query 1513 AAGGAGAATCTGCGTTACCATAAAATTATCATCTTAACAGATGCAGATGTTGATGGTGCA 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1888 AAGGAGAATCTGCGTTACCATAAAATTATCATCTTAACAGATGCAGATGTTGATGGTGCA 1947
Query 1573 CATATCCGGACACTTCTGTTAACCTTTTTCTTCAGATATCAGAGAGCCTTGTTTGACGCG 1632
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1948 CATATCCGGACACTTCTGTTGACCTTTTTCTTCAGATATCAGAGAGCCTTGTTTGACGCG 2007
Query 1633 GGTTGCATATACGTTGGTGTTCCACCTCTTTTCAAGGTTGAGAGGGGGAAACAGGCGCAC 1692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2008 GGTTGCATATACGTTGGTGTTCCACCTCTTTTCAAGGTTGAGAGGGGGAAACAGGCGCAC 2067
Query 1693 TATTGCTACGATGATGCAGCTCTTaaaaaaaTTACCGCTTCGTTCCCTGCAAACGCATCT 1752
|| ||||||||||||||||||||||||||||| || ||||||||||||| |||||||||
Sbjct 2068 TACTGCTACGATGATGCAGCTCTTAAAAAAATCACTGCTTCGTTCCCTGGAAACGCATCC 2127
Query 1753 TACAACATTCAGAGGTTCAAAGGTTTGGGTGAGATGATGCCTGCGCAGCTATGGGAAACA 1812
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2128 TACAACATTCAGAGGTTCAAAGGTTTGGGTGAGATGATGCCTGCGCAGCTATGGGAAACA 2187
Query 1813 ACAATGAACCCAGATACAAGGATATTGAAGCAACTAGTTGTTGAGGACGCAGCAGAAACG 1872
|| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2188 ACGATGAATCCAGATACAAGGATATTGAAGCAACTAGTTGTTGACGACGCAGCAGAAACG 2247
Query 1873 AATATGGTCTTCTCATCTCTGATGGGTGCTCGGGTGGATGTCAGGAAGGAACTCATCAAA 1932
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2248 AATATGGTCTTCTCATCTCTGATGGGTGCTCGGGTCGATGTCAGGAAGGAACTCATCAAA 2307
Query 1933 AGTGCTGCGACTAGGATGAATCTGGAGAATCTCGACATATAACACAGCTTAT--T----G 1986
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 2308 AGTGCTGCGACTAGGATGAATCTGGAGAATCTCGACATATAACACAGCTTATAGTTATTG 2367
Query 1987 CGTCAGCTATATACAAACAACAAAGAGACGAATTTGGTGAAGTGCAAAGGGAGTTTAAGA 2046
| |||||||||||||||||||||||| |||| | ||||||| ||||||||||| |
Sbjct 2368 CTTCAGCTATATACAAACAACAAAGAAACGACTCTGGTGAAATGCAAAGGGAG---A--- 2421
Query 2047 GACATCATCATTTTAAGGTTGAATCATATAGTCACAGGCCAACAGGATTTTGTTCTTCTT 2106
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2422 --CATCATCATTTCAAGGTTAAATCATATAGTCACAGGCCAACAGGATTTTGTTCTTCTT 2479
Query 2107 CTGGCCTATAAAG-ACAAAAATCATTGTTAGGATTATTATCTCGCAATATCAAAATTTAG 2165
||||||||||||| |||||| |||||||||||||||| ||| |||| |||||||||||
Sbjct 2480 CTGGCCTATAAAGGACAAAATTCATTGTTAGGATTATC-TCTTTCAATGTCAAAATTTAG 2538
Query 2166 CAATTCACAAGG 2177
||||||||||||
Sbjct 2539 CAATTCACAAGG 2550
Score = 1616 bits (875), Expect = 0.0
Identities = 942/973 (97%), Gaps = 9/973 (1%)
Strand=Plus/Plus
Query 1 ATGGAGTCTCTCCAAGAGAGCTCTACCTCTAAGGATTATAGTTCCGAGCACATCCAAGTG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 289 ATGGAGTCTCTCCAAGAGAGCTCTACCTCTAAGGATTATAGTTCCGAGCACATCCAAGTG 348
Query 61 TTGGAAGGCTTAGATCCTGTCAGGAAAAGACCTGGAATGTATATTGGTAGCACCGGATCT 120
|||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 349 TTGGAAGGCTTAGACCCTGTCAGGAAAAGACCTGGGATGTATATTGGTAGCACTGGATCT 408
Query 121 CGTGGTTTGCACCATCTGGTTTATGAGATCCTTGACAACGCAATTGACGAGGCCCAAGCT 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 409 CGTGGTTTGCACCATCTGGTTTATGAGATCCTTGACAACGCAATTGACGAGGCCCAAGCT 468
Query 181 GGTTTTGCTTCAAAGATTGACGTTGTTTTACATTCAGATGATTCAGTCAGCATTTCAGAC 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 469 GGTTTTGCTTCAAAGATCGACGTTGTTTTACATTCAGATGATTCAGTCAGCATTTCAGAC 528
Query 241 AATGGACGTGGGATACCCACAGATTTGCATCCTGCAACGGGAAAATCGGCTTTGGAAACT 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 529 AATGGACGTGGGATACCCACAGATTTGCATCCTGCAACGGGAAAATCGTCTTTGGAAACT 588
Query 301 GTCCTTACGGTCTTACATGCAGGGGGTAAGTTTGGTGGCAAGAGTAGTGGGTACAGCGTG 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 589 GTCCTTACGGTCTTACATGCAGGTGGTAAGTTTGGTGGCAAGAGTAGTGGGTACAGCGTG 648
Query 361 TCTGGTGGATTGCATGGCGTAGGTTTATCAGTTGTGAATGCATTGTCAGAGGGATTGGAG 420
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 649 TCTGGTGGATTGCATGGCGTAGGTTTATCGGTTGTGAATGCATTGTCAGAGGCATTGGAG 708
Query 421 GTTATTGTTCGCAGAGATGGGATGGAGTTTCAGCAGAAGTATTCTCGTGGAAAGCCTGTA 480
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 709 GTTATAGTTCGCAGAGATGGAATGGAGTTTCAGCAGAAGTATTCTCGTGGAAAGCCCGTA 768
Query 481 ACAACACTTACATGTCATGTCCTCCCACCAGAGTCAAGGGGGACTCAAGGGACATGCATC 540
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 769 ACAACACTTACATGTCATGTCCTACCACCAGAGTCAAGGGGGACTCAAGGGACATGCATC 828
Query 541 CGGTTTTGGCCTGACAAAGAAGGTTTTGCCTTATTCACAACTGCAATTCAATTCGACCAT 600
||||| |||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct 829 CGGTTCTGGCCTGACAAAGAAG-T--------ATTCACAACTGCAATTCAATTCGACCAT 879
Query 601 AACACTATTGCTGGACGAATTAGGGAGCTTGCTTTTCTAAATCCAAAGGTTACAATCTCT 660
||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||
Sbjct 880 AACACTATTGCTGGACGGATCAGGGAGCTTGCTTTTCTCAATCCAAAGGTTACAATCTCT 939
Query 661 CTAAAAAAGGAGGATGATGATCCAGAAAGGGGCTTGTATAGTGAATATTTTTATGCTGGA 720
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 940 CTAAAAAAGGAGGATGATGATCCAGAAAGGGACGTGTATAGTGAATATTTTTATGCTGGA 999
Query 721 GGGTTAACTGAATATGTTAGCTGGCTAAATACTGATAAGAAACCGCTTCATGATGTGCTG 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1000 GGGTTAACTGAATATGTTAGCTGGCTAAATACTGATAAGAAACCGCTTCATGATGTGCTG 1059
Query 781 GGTTTCAGAAAAGAGATAAATGGCTCCACCGTTGACGTTTCACTTCAGTGGTGCTCAGAT 840
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1060 GGTTTCCGGAAAGAGATAAATGGCTCCACCGTTGACGTTTCACTTCAGTGGTGCTCAGAT 1119
Query 841 GCCTATTCAGACACGATGCTGGGATACGCGAATAGTATTCGGACCATTGATGGTGGGACA 900
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1120 GCCTATTCAGACACGATGCTGGGATACGCGAATAGTATTCGGACCATAGATGGTGGGACA 1179
Query 901 CATATAGAAGGTGTGAAGGCTTCATTAACAAGAACTCTAAATTCCCTTGCGAAAAAGTTA 960
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1180 CATATAGAAGGTGTGAAGGCTTCATTAACAAGAACTCTAAATTCCCTTGCAAAAAAGTTA 1239
Query 961 AAGGTTATCAAGG 973
|||||||||||||
Sbjct 1240 AAGGTTATCAAGG 1252
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 107981372295
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5