BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478619 Length=1368 Score E Sequences producing significant alignments: (Bits) Value AT3G12610.1 | Symbols: DRT100 | Leucine-rich repeat (LRR) famil... 2061 0.0 > AT3G12610.1 | Symbols: DRT100 | Leucine-rich repeat (LRR) family protein | chr3:4006399-4007807 REVERSE LENGTH=1409 Length=1409 Score = 2061 bits (1116), Expect = 0.0 Identities = 1292/1376 (94%), Gaps = 16/1376 (1%) Strand=Plus/Plus Query 1 ATATCAAACATTTATTTTAAAAATGAGAAAGTTGTTAGCATCGCCGTTTAGTTCATTACT 60 ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 7 ATATCAAACATTTCTTTTAAAAATGAGAAAGTTGTTGGCATCGCCGTTTAGTTCATTACT 66 Query 61 CGCCGTAGTTTTCATTTCCGTCATCTCCGTCGTCCGATGCTGCTCTCCTGAAGATCAGAC 120 |||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||| Sbjct 67 CGCCGTCGTTTTCATTTCCGTCATCTCCGTCGTCAGATGCTGCTCTCCTAAAGATCAGAC 126 Query 121 GGCTCTCAATGCTTTCAAGTCATCACTGAGCGAACCAAACCTAGGCATCTTTAACACTTG 180 ||||||||||||||||||||| |||||||||||||||||||| || ||||| |||||||| Sbjct 127 GGCTCTCAATGCTTTCAAGTCGTCACTGAGCGAACCAAACCTCGGTATCTTCAACACTTG 186 Query 181 GTCTGAAAACACTGACTGTTGCAAGGAATGGTACGGTATTAGCTGCGATCCTGATTCGGG 240 ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct 187 GTCTGAAAACACTGATTGTTGCAAGGAATGGTACGGTATCAGCTGCGATCCTGATTCGGG 246 Query 241 TCGGGTCACTGATATTTCTCTCCGGGGAGAATCTGAAGACGCCATTTTCCAAAAGGCAGG 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 247 TCGGGTCACTGATATTTCTCTCCGGGGAGAATCTGAAGACGCCATTTTCCAAAAGGCAGG 306 Query 301 CCGGTCCGGTTATATGTCCGGTTCGATTGATCCATCGGTTTGTGACTTAACCGCACTCAC 360 |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| Sbjct 307 CCGGTCCGGTTATATGTCCGGTTCGATTGATCCAGCAGTTTGTGACTTAACCGCACTCAC 366 Query 361 TTCCCTCGTCCTCGCCGACTGGAAAGGAATCACCGGAGAGATTCCTCCGTGCGTAACCTC 420 ||||||||| |||||||||||||||||||||||||||||||||||||||||| | || || Sbjct 367 TTCCCTCGTTCTCGCCGACTGGAAAGGAATCACCGGAGAGATTCCTCCGTGCATTACTTC 426 Query 421 ATTGGCTTCTCTCCGTATCTTCGACCTCGCCGGCAACAAGATCACCGGAGG-GATTCCCG 479 | ||||| ||||||||| |||| ||||||||||||||||||||||| || |||||||| Sbjct 427 CCTAGCTTCGCTCCGTATCCTCGATCTCGCCGGCAACAAGATCACCGG-GGAGATTCCCG 485 Query 480 CGGAAATCGGCAAACTCTCAAAACTCGCTGTTCTAAACCTCGCGGAGAATCAGATGTCCG 539 ||||||||||||||||||| |||||||||||| |||||||||| |||||||| ||||||| Sbjct 486 CGGAAATCGGCAAACTCTCGAAACTCGCTGTTTTAAACCTCGCCGAGAATCAAATGTCCG 545 Query 540 GCGAGATTCCGTCGTTGCTGACGTCACTCGTCGAGTTGAAGCATCTTGAATTGACGGAAA 599 ||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| Sbjct 546 GCGAGATTCCGGCGTCACTGACGTCACTCATCGAGTTGAAGCATCTTGAATTGACGGAAA 605 Query 600 ACGGAATCACCGGCGTGATCCCGGCCGACTTCGGATCGTTGAAGATGCTGAGCAGAGTTT 659 | |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 606 ATGGAATCACCGGCGTGATCCCGGCCGATTTCGGATCGTTGAAGATGTTGAGCAGAGTTT 665 Query 660 TAATGGGCCGTAACGAGCTAACCGGGTCAATACCAGAGTCGATCTCGGGTATGGGACGGT 719 || ||||||||||||| |||||||||||||| |||||||||||||||||||||| ||||| Sbjct 666 TACTGGGCCGTAACGAACTAACCGGGTCAATTCCAGAGTCGATCTCGGGTATGGAACGGT 725 Query 720 TAGTGGATCTGGATCTATCCAGGAACCATATCGAAGGTCCGATACCCGAATGGATGGGTA 779 ||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 726 TAGCGGATCTGGATCTATCCAAAAACCATATCGAAGGTCCGATACCCGAATGGATGGGTA 785 Query 780 ACATGAAGGTACTCTCACTTTTGAATCTCGATTGCAATTCGTTAACCGGTTCAATCCCCG 839 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 786 ACATGAAGGTACTCTCACTTTTGAATCTCGATTGCAATTCGTTAACCGGTCCAATCCCCG 845 Query 840 GTTCGCTTCTTAGCAATTCCGGTTTAGATGTTGCGAATTTGAGCAGAAATGCGTTGGAAG 899 |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| Sbjct 846 GTTCGCTTCTTAGCAATTCCGGTTTAGATGTTGCCAATTTGAGCCGAAATGCGTTGGAAG 905 Query 900 GATCTATACCCGACGTTTTCGGGTCAAAAACGTATTTAGTTTCGCTTGATTTGTCCCACA 959 || ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| Sbjct 906 GAACTATACCCGACGTTTTCGGGTCAAAAACGTATTTAGTTTCGCTTGATCTGTCACACA 965 Query 960 ATAATCTATCGGGTCGGATCCCGGATTCGTTGTCGTCAGCTAAGTTTGTGGGACATTTGG 1019 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 966 ATAGTCTATCGGGTCGGATCCCGGATTCGTTGTCGTCAGCTAAGTTTGTGGGACATTTGG 1025 Query 1020 ATATTAGCCATAACAAGCTTTGTGGGCGTATCCCAACGGGTTCTCCTTTTGATCACCTTG 1079 ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| Sbjct 1026 ATATTAGCCATAACAAGCTTTGTGGGCGTATTCCAACGGGTTTTCCTTTTGATCACCTTG 1085 Query 1080 AAGCCACGTCGTTTAGTGACAACCAATGTCTCTGCGGTGGCCCTTTGATGACGTTATGTT 1139 |||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1086 AAGCTACGTCGTTTAGTGACAACCAATGTCTCTGCGGTGGCCCTTTGACGACGTCATGTT 1145 Query 1140 AATAACAAGGATATGGTTCC-GGTTTTACTGAACCGGGTT-T-CTTGTTGCTGTTGCTCT 1196 |||||||||||||||||| | ||||||||||||||||||| | ||| ||||||||||||| Sbjct 1146 AATAACAAGGATATGGTTTCTGGTTTTACTGAACCGGGTTATTCTTTTTGCTGTTGCTCT 1205 Query 1197 TGTTCGCTGTATCAAACTTGTGATATTTTACTTTTCATTTA--C-T-TTTCAGATTTTAG 1252 |||||| |||||||||||||||||||||| |||||||||| | | ||||||||||||| Sbjct 1206 TGTTCGTTGTATCAAACTTGTGATATTTTGCTTTTCATTTCTTCGTCTTTCAGATTTTAG 1265 Query 1253 TTT-TCACAGCTAATATATGTTCTACTACTGGCAACGGACAGGTACACCGATCCAATATG 1311 ||| | | |||||| ||||||| ||| |||||||||||||||||||||||||||||| Sbjct 1266 TTTCTAA-AGCTAAGATATGTT--ACT---GGCAACGGACAGGTACACCGATCCAATATG 1319 Query 1312 CTTTGCGGTTTATGTAAAATGATTCCGAATGTAATATTAAAAGCAACGTTATAGAA 1367 |||||||| |||||| ||||| |||| |||||| || |||||||| ||||||||| Sbjct 1320 GTTTGCGGTCTATGTACAATGAATCCGGATGTAAAATCAAAAGCAATGTTATAGAA 1375 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 67369131390 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5