BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478817
Length=2552
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14067.1 | Symbols: | Subtilase family protein | chr3:46581... 3951 0.0
> AT3G14067.1 | Symbols: | Subtilase family protein | chr3:4658198-4660784
REVERSE LENGTH=2587
Length=2587
Score = 3951 bits (2139), Expect = 0.0
Identities = 2430/2570 (95%), Gaps = 21/2570 (1%)
Strand=Plus/Plus
Query 1 TCTTCTTCTTCCATCGCCATTGTCATGGCTAAGctctctccttcctccgtcttcttcgtc 60
|||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||||||
Sbjct 7 TCTTCTTCTTCCATCGCCATTGCCATGGCTAAGCTCTCTCTTTCCTCCATCTTCTTCGTC 66
Query 61 ttctctctcttcctctgtttcttctccccttcttattcttcATCGGATGGCTTAGAATCC 120
||| ||||| ||||||||||||| |||||||||| |||||||||||||||||||||||||
Sbjct 67 TTCCCTCTCCTCCTCTGTTTCTTTTCCCCTTCTTCTTCTTCATCGGATGGCTTAGAATCC 126
Query 121 TACATCGTCCATGTGCAAAGATCTCATAAGccttccctcttctcctcccataaccactgg 180
||||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||
Sbjct 127 TACATCGTCCATGTGCAGAGATCTCATAAGCCTTCCCTCTTCTCCTCCCACAACAACTGG 186
Query 181 cacgtctctctccttcgctctctcccttcttctccccaaccagcaacgctcctctactct 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 187 CACGTCTCTCTCCTTCGCTCTCTCCCTTCTTCTCCCCAACCAGCAACGCTGCTCTACTCT 246
Query 241 tactcACGCGCCGTTCATGGCTTCTCCGCTCGCCTCTCCCCTATCCAAACAGCCGCACTC 300
|| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct 247 TATTCACGCGCCGTTCATGGCTTCTCCGCTCGTCTCTCCCCTATCCAAACCGCCGCCCTC 306
Query 301 CGCCGTCATCCTTCCGTCATTTCCGTTATACCAGATCAAGCGCGTGAGATCCACACCACT 360
|||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||| |||
Sbjct 307 CGCCGTCATCCTTCAGTCATCTCCGTTATACCTGATCAAGCGCGTGAGATCCACACAACT 366
Query 361 CACACACCTGACTTCCTCGGTTTCTCCCAAAACTCTGGTCTCTGGGGCAACTCAGATTAC 420
||||| |||| ||||||||||||||||||||||||||| |||||| |||||||| |||||
Sbjct 367 CACACGCCTGCCTTCCTCGGTTTCTCCCAAAACTCTGGACTCTGGAGCAACTCAAATTAC 426
Query 421 GGCGAGGACGTGATCGTCGGCGTTCTAGATACTGGAATCTGGCCGGAGCATCCAAGTTTC 480
|| || |||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 427 GGGGAAGACGTGATCGTCGGCGTTTTAGATACTGGAATCTGGCCGGAACATCCAAGTTTC 486
Query 481 TCGGATTCAGGTCTCGGTCCCGTTCCATCTACATGGAAAGGCGAGTGCGAGATCGGACCT 540
|||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct 487 TCGGATTCAGGTCTCGGTCCAATTCCATCTACCTGGAAAGGCGAGTGCGAGATCGGACCT 546
Query 541 GATTTTCCCGCCTCATCTTGCAATCGGAAGCTTATCGGAGCTCGAGCGTATTACAAGGGA 600
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct 547 GATTTTCCTGCCTCATCTTGCAATCGGAAGCTTATCGGAGCTCGAGCGTTTTACAGGGGA 606
Query 601 TATTTAACGCAACGGAATGGAACAAAAAAGCATGTAGCGAAGGAATCGAGATCGCCGCGC 660
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 607 TATTTAACGCAACGGAATGGAACAAAAAAGCATGCAGCCAAGGAATCGAGATCGCCGCGT 666
Query 661 GATACAGAAGGTCATGGGACGCATACGGCATCTACGGCGGCTGGATCGGTGGTTGCAAAC 720
||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||| |||
Sbjct 667 GATACAGAAGGTCATGGCACGCACACGGCATCTACGGCAGCTGGATCGGTGGTTGCTAAC 726
Query 721 GCGAGTTTGTTCCAGTACGCGCGTGGAACGGCT-CGTGGGATGGCGTCTAAGGCGAGAAT 779
|||||||||| |||||||||||| ||||| ||| | |||||||||||| |||||||||||
Sbjct 727 GCGAGTTTGTACCAGTACGCGCGCGGAACAGCTAC-TGGGATGGCGTCAAAGGCGAGAAT 785
Query 780 CGCCGCTTACAAAATCTGTTGGAGCAGCGGATGCTACGATTCCGATATCCTCGCCGCCAT 839
||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||
Sbjct 786 CGCCGCTTACAAAATCTGTTGGACCGGCGGATGTTACGATTCCGATATCCTCGCCGCCAT 845
Query 840 GGATCAGGCGGTTGCGGACGGTGTTCACGTTATCTCTCTCTCCGTCGGAGCCAGCGGTTA 899
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 846 GGATCAGGCGGTTGCCGACGGTGTTCACGTTATCTCTCTCTCCGTCGGAGCCAGCGGTTC 905
Query 900 CGCCCCGGAGTATCACACGGATTCTATCGCGATCGGAGCATTTGGAGCCACGCGACACGG 959
||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||
Sbjct 906 CGCCCCGGAGTATCACACGGACTCTATAGCGATCGGAGCATTTGGAGCCACGCGGCACGG 965
Query 960 CATCGTCGTTTCCTGCTCCGCTGGGAATTCTGGTCCTGGTCCTGAAACAGCCACGAACAT 1019
|||||||||||| |||||||||||||||||||||||| ||||||||| || ||||||||
Sbjct 966 CATCGTCGTTTCTTGCTCCGCTGGGAATTCTGGTCCTAATCCTGAAACCGCGACGAACAT 1025
Query 1020 CGCTCCATGGATCTTAACCGTTGGTGCGTCCACCGTCGATAGAGAATTCTCCGCAAACGC 1079
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1026 CGCTCCATGGATCTTAACCGTTGGTGCGTCCACCGTCGATAGAGAATTCGCCGCAAACGC 1085
Query 1080 AATCACTGGAGACGGGAAAGTCTTCACGGGAACATCACTGTACGCAGGCGAATCTCTACC 1139
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1086 AATCACGGGAGACGGGAAAGTCTTCACGGGAACATCACTGTACGCAGGCGAATCTCTACC 1145
Query 1140 GGATTCTCAACTTTCTCTGGTATATTCCGGCGATTGCGGAAGCAGATTGTGTTACCCTGG 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1146 GGATTCTCAACTTTCTCTGGTATATTCCGGCGATTGCGGAAGCAGATTGTGTTACCCTGG 1205
Query 1200 GAAATTGAATTCAACATTAGTGGAAGGCAAAATCGTTCTCTGTGACAGAGGAGGCAACGC 1259
||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||||
Sbjct 1206 GAAATTGAATTCATCATTGGTTGAAGGCAAAATCGTGCTCTGTGACAGAGGAGGCAACGC 1265
Query 1260 AAGAGTTGAGAAAGGAAGTGCCGTCAAGCTAGCCGGTGGTGCAGGTATGATTCTGGCGAA 1319
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1266 AAGAGTTGAGAAAGGAAGTGCAGTCAAGCTAGCCGGTGGTGCTGGTATGATTCTGGCGAA 1325
Query 1320 CACAGCTGAAAGCGGTGAAGAACTCACCGCCGATTCGCATCTCGTCCCGGCGACAATGGT 1379
|||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||
Sbjct 1326 CACAGCTGAAAGCGGTGAAGAATTAACCGCCGATTCGCATCTCGTCCCGGCGACAATGGT 1385
Query 1380 TGGAGCTAAAGCTGGAGATCAAATCCGCGACTACATCAAAACATCAGACTCTCCCACCGC 1439
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1386 TGGAGCTAAAGCTGGAGATCAAATCCGCGACTACATCAAAACATCAGACTCTCCCACTGC 1445
Query 1440 AAAAATCAGTTTCCTAGGCACTTTGATCGGACCATCTCCTCCTTCTCCCAGAGTCGCCGC 1499
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1446 AAAAATCAGTTTCCTAGGCACTTTGATCGGACCATCTCCTCCTTCTCCCAGAGTCGCCGC 1505
Query 1500 TTTCTCCAGCCGTGGACCAAACCACTTGACTCCGGTTATCCTTAAACCGGACGTGATTGC 1559
|||||||||||||||||| || |||||||| |||||||| ||||||||||||||||||||
Sbjct 1506 TTTCTCCAGCCGTGGACCGAATCACTTGACACCGGTTATTCTTAAACCGGACGTGATTGC 1565
Query 1560 TCCCGGAGTCAACATTTTAGCCGGTTGGACCGGGATGGTTGGTCCTACCGATTTGGATAT 1619
||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1566 TCCTGGAGTCAACATTTTAGCCGGTTGGACCGGGATGGTTGGTCCTACCGATTTAGATAT 1625
Query 1620 CGACCCAAGACGGGTCCAATTCAACATCATCTCCGGTACATCGATGTCGTGCCCACACGT 1679
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1626 CGATCCAAGACGGGTTCAATTCAACATCATCTCCGGTACATCGATGTCGTGCCCACACGT 1685
Query 1680 TAGTGGACTCGCCGCTCTCCTCCGTAAAGCTCACCCCGAGTGGTCACCTGCAGCAATCAA 1739
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct 1686 TAGTGGACTCGCCGCTCTCCTCCGTAAAGCTCATCCCGATTGGTCACCTGCAGCAATCAA 1745
Query 1740 ATCCGCCCTCGTAACCACCGCTTACGATGTCGAAAACTCCGGCGAACCAATCGAGGATCT 1799
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1746 ATCCGCCCTTGTAACCACCGCTTACGATGTCGAAAACTCCGGCGAACCAATCGAGGATCT 1805
Query 1800 CGCAACTAGTAAATCATCGAACTCATTCATCCACGGAGCTGGGCACGTCGATCCAAACAA 1859
||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1806 CGCCACCGGTAAATCATCGAACTCATTCATCCACGGAGCTGGACACGTCGATCCAAACAA 1865
Query 1860 AGCTTTAAATCCTGGTTTGGTTTACGACATCGAAGTTAAAGAGTACGTAGCTTTCCTCTG 1919
|||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1866 AGCTTTGAATCCTGGTTTGGTTTACGACATCGAGGTCAAAGAGTACGTAGCTTTCCTCTG 1925
Query 1920 CGCCGTGGGATATGAGTTTCCGGGGATTCTAGTCTTCCTTCAAGATCCAACTCTTTTCAA 1979
|||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| | |
Sbjct 1926 CGCCGTGGGATACGAGTTTCCGGGGATTCTAGTCTTTCTTCAAGATCCAACTCTTTACGA 1985
Query 1980 TGCCTGCGAAACGAGCAAGCTAAGAACCGCCGGAGATCTCAATTACCCATCTTTCTCAGT 2039
|| || |||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 1986 CGCATGTGAAACGAGCAAGCTAAGAACCGCCGGCGATCTCAATTACCCATCTTTCTCCGT 2045
Query 2040 GGTTTTCGGATCGACCGGAGA-GATTGTGAAATACAGAAGGGTTGTCAAAAACGTGGGAA 2098
|||||||| ||||||||| || | |||||||||||| |||||||||||||||||||||||
Sbjct 2046 GGTTTTCGCATCGACCGGGGAAG-TTGTGAAATACAAAAGGGTTGTCAAAAACGTGGGAA 2104
Query 2099 GCAATGTTGACGCGGTGTACGAAGTCGGAGTTAAATCTCCGGCGAATGTTGAGATTGATG 2158
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2105 GCAATGTCGACGCTGTGTACGAAGTCGGAGTTAAATCTCCGGCGAATGTTGAGATTGATG 2164
Query 2159 TGTCCCCGAGCAAGCTTGCGTTCAGCAAGGAGAAGAGCGAGTTGGAGTATGAAGTGACGT 2218
| || || ||||||||||||||||||||||||||||||| ||||||||||||||| || |
Sbjct 2165 TTTCTCCAAGCAAGCTTGCGTTCAGCAAGGAGAAGAGCGTGTTGGAGTATGAAGTCACAT 2224
Query 2219 TTAAGAGCGTTGTACTCGGCGGAGGAGTCGGATCCGTGCCGGGTCATGAATTCGGGTCGA 2278
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2225 TTAAGAGCGTTGTGCTCGGCGGAGGAGTCGGATCCGTGCCGGGTCATGAATTCGGGTCGA 2284
Query 2279 TCGAATGGACAGACGGTGAACACGTGGTGAAGAGTCCGGTGGCCGTCCAATGGGGTCAGG 2338
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 2285 TCGAATGGACAGACGGTGAACACGTTGTTAAGAGTCCGGTGGCCGTCCAATGGGGTCAGG 2344
Query 2339 GATCAGTTCAGTCCTTCTGATTG------G-----G--CTCTGGTTTTATGTTTTCATTA 2385
||||||||||||||||||||||| | | |||||||| |||||||||||||
Sbjct 2345 GATCAGTTCAGTCCTTCTGATTGATCATTGAAATTGGGCTCTGGTTGTATGTTTTCATTA 2404
Query 2386 AAAAGAAAAA-GTCATGTCGGGTTCGTTTAATGGGCCATGTTGTTAATGGGCCGATCTGT 2444
|||||||||| ||| ||||||||| ||| || ||||||||||||||||||||||||||||
Sbjct 2405 AAAAGAAAAAAGTCCTGTCGGGTTTGTTAAAAGGGCCATGTTGTTAATGGGCCGATCTGT 2464
Query 2445 ATACTCATTTATTGAGCCCTCACTCTTGGGTTAGACCACTATGCATGGGGTG--AATGAG 2502
||||||||| || ||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2465 ATACTCATTAAT-GAGCCCTCACTCTTGGGTTAGACCACTATGCATGGGGTGTGAATGAG 2523
Query 2503 CAGAAAATTCGATTGGCATTTGTAAACTTTTACTTTCTTGTTTGATTTCA 2552
|||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 2524 CAGAAAATCCGATTGGCATTTGTAAACTTTTAGATTCTTGTTTGATTTCA 2573
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 126671531075
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5