BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478862
Length=1418
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14420.1 | Symbols: | Aldolase-type TIM barrel family prote... 2050 0.0
AT3G14415.2 | Symbols: | Aldolase-type TIM barrel family prote... 1544 0.0
> AT3G14420.1 | Symbols: | Aldolase-type TIM barrel family protein
| chr3:4821523-4824178 FORWARD LENGTH=1515
Length=1515
Score = 2050 bits (1110), Expect = 0.0
Identities = 1208/1254 (96%), Gaps = 11/1254 (1%)
Strand=Plus/Plus
Query 165 ATGGAGATCACTAACGTTACCGAGTATGACGCAATCGCAAAGCAGAAGTTGCCTAAGATG 224
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct 133 ATGGAGATCACTAACGTTACCGAGTATGATGCAATCGCAAAGCAGAAGCTGCCTAAGATG 192
Query 225 GTATACGACTACTATGCGTCTGGTGCAGAGGACCAATGGACTCTTCAAGAGAACAGAAAC 284
|| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 193 GTGTACGACTACTATGCATCTGGTGCAGAAGACCAATGGACTCTTCAAGAGAACAGAAAC 252
Query 285 GCTTTCGCAAGGATCCTCTTTCGGCCTCGGATTCTGATTGATGTGAGCAAGATTGACATG 344
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 253 GCTTTTGCAAGGATCCTCTTTCGGCCTCGGATTCTGATTGATGTGAGCAAGATTGACATG 312
Query 345 ACAACCACCGTCTTGGGGTTCAAGATCTCGATGCCCATCATGGTTGCTCCTACTGCCATG 404
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 313 ACAACCACCGTCTTGGGGTTCAAGATCTCGATGCCCATCATGGTTGCTCCAACTGCCATG 372
Query 405 CAAAAGATGGCTCACCCTGATGGGGAATATGCTACAGCTAGAGCTGCATCTGCAGCTGGA 464
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 373 CAAAAGATGGCTCACCCTGATGGGGAATATGCTACTGCTAGAGCTGCATCTGCAGCTGGA 432
Query 465 ACTATCATGACACTATCTTCATGGGCTACTTCCAGCGTTGAAGAGGTTGCTTCCACAGGG 524
|||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct 433 ACTATCATGACACTATCTTCATGGGCTACTTCCAGCGTTGAAGAAGTTGCGTCTACAGGG 492
Query 525 CCAGGGATCCGATTCTTCCAGCTCTATGTATACAAGAACAGGAATGTGGTTGAGCAGCTC 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 493 CCAGGGATCCGATTCTTCCAGCTCTATGTATACAAGAACAGGAATGTGGTTGAGCAGCTC 552
Query 585 GTGAGAAGAGCTGAGAGGGCTGGGTTCAAAGCCATTGCTCTCACTGTAGATACCCCACGG 644
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct 553 GTGAGAAGAGCTGAGAGGGCTGGGTTCAAAGCCATTGCTCTCACTGTAGACACCCCAAGG 612
Query 645 CTAGGCCGCAGAGAGTCTGATATCAAGAACAGATTCACTTTGCCTCCTAACCTGACATTG 704
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 613 CTAGGCCGCAGAGAGTCTGATATCAAGAACAGATTCACTTTGCCTCCAAACCTGACATTG 672
Query 705 AAGAACTTTGAAGGTCTTGACCTCGGAAAGATGGACGAGGCCAATGACTCTGGCTTGGCT 764
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 673 AAGAACTTTGAAGGACTTGACCTCGGAAAGATGGACGAGGCCAATGACTCTGGCTTGGCT 732
Query 765 TCATATGTTGCTGGTCAAATTGACCGTACCTTAAGCTGGAAGGATGTCCAGTGGCTCCAG 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 733 TCATATGTTGCTGGTCAAATTGACCGTACCTTAAGCTGGAAGGATGTCCAGTGGCTCCAG 792
Query 825 ACAATCACCAAATTGCCGATTCTTGTCAAGGGTGTTCTTACAGGAGAGGATGCAAGGATA 884
||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 793 ACAATCACCAAGTTGCCCATTCTTGTCAAAGGTGTTCTTACAGGAGAGGATGCAAGGATA 852
Query 885 GCGATTCAAGCTGGTGCAGCCGGAATCATTGTGTCAAACCATGGAGCTCGCCAGCTTGAC 944
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 853 GCGATTCAAGCTGGTGCAGCCGGAATCATTGTATCAAACCATGGAGCTCGCCAGCTTGAC 912
Query 945 TATGTCCCAGCAACAATCTCAGCCCTTGAAGAGGTTGTCAAAGCGACACAAGGACGAATT 1004
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 913 TATGTCCCAGCAACCATCTCGGCCCTTGAAGAGGTTGTCAAAGCGACACAAGGACGAATT 972
Query 1005 CCTGTCTTCTTGGATGGTGGTGTTCGACGTGGCACTGATGTCTTCAAGGCACTAGCACTT 1064
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 973 CCTGTCTTCTTGGATGGTGGTGTTCGACGTGGCACTGATGTCTTCAAAGCACTTGCACTT 1032
Query 1065 GGAGCCTCCGGGATATTTATTGGAAGACCAGTGGTATTCTCATTGGCTGCTGAAGGAGAG 1124
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1033 GGAGCCTCCGGGATATTTATTGGAAGACCAGTGGTATTCTCATTGGCAGCTGAAGGAGAG 1092
Query 1125 GCTGGAGTCAGAAAGGTGCTTCAAATGCTACGTGATGAGTTCGAGCTGACCATGGCACTG 1184
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1093 GCTGGAGTTAGAAAGGTGCTTCAAATGCTACGTGATGAGTTCGAGCTGACCATGGCACTG 1152
Query 1185 AGTGGGTGCCGGTCTCTAAAGGAAATCTCCCGTAACCACATTACCACCGAATGGGACACT 1244
|||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1153 AGTGGGTGTCGGTCCCTAAAGGAAATCTCCCGTAACCACATTACCACCGAATGGGACACT 1212
Query 1245 CCACGTCCTTCGGCCAGGTTATAGAGAGaaaaaaacaacaacaacaacaagaagcagaga 1304
||||||||||| |||||||||||||||| |||| | | | |||||| | ||||||
Sbjct 1213 CCACGTCCTTCAGCCAGGTTATAGAGAGGAAAATA-A-C--CAACAA---G---CAGAGA 1262
Query 1305 acagcagcaacacagaaccaaacTATTGGCTAAACTTATTCATACTCTAATTGGTACTTG 1364
|||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||||
Sbjct 1263 ACAGCAGCAACACAGAACCAAAATATTGGCTAAACTTATTCATACTCTGATTG-TACTTG 1321
Query 1365 GCTTCTACTCTGCTATCTATCTCAAGACTTGTTTCTCCCTCTATCAAATCACAA 1418
||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1322 GCTTCTACTCTGCTAAATATCTCAAGACTTGTTTCTCCCTCTATCAGATCACAA 1375
Score = 250 bits (135), Expect = 3e-65
Identities = 145/150 (97%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 15 CACACTTGGGAAGATGGAGATCACTAACGTTACCGAGTATGATGCAATCGCAAAGCAGAA 74
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 120 CACACTTCGGAAGATGGAGATCACTAACGTTACCGAGTATGATGCAATCGCAAAGCAGAA 179
Query 75 GTTGCCTAAGATGGCATACGACTACTATGCATCTGGTGCAGAAGATCAATGGACTCTTCA 134
| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 180 GCTGCCTAAGATGGTGTACGACTACTATGCATCTGGTGCAGAAGACCAATGGACTCTTCA 239
Query 135 AGAGAACAGAAACGCTTTTGCAAGGATCCT 164
||||||||||||||||||||||||||||||
Sbjct 240 AGAGAACAGAAACGCTTTTGCAAGGATCCT 269
> AT3G14415.2 | Symbols: | Aldolase-type TIM barrel family protein
| chr3:4818298-4821006 FORWARD LENGTH=1635
Length=1635
Score = 1544 bits (836), Expect = 0.0
Identities = 1051/1151 (91%), Gaps = 30/1151 (3%)
Strand=Plus/Plus
Query 165 ATGGAGATCACTAACGTTACCGAGTATGACGCAATCGCAAA-GCAGAAGTTGCCTAAGAT 223
||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||
Sbjct 256 ATGGAGATCACTAACGTTACCGAGTATGATGCAATCGCAAAGGC-GAAGTTGCCTAAGAT 314
Query 224 GGTATACGACTACTATGCGTCTGGTGCAGAGGACCAATGGACTCTTCAAGAGAACAGAAA 283
|||||| ||||||||||| ||||||||||| || ||||||||||||||||||||||||||
Sbjct 315 GGTATATGACTACTATGCATCTGGTGCAGAAGATCAATGGACTCTTCAAGAGAACAGAAA 374
Query 284 CGCTTTCGCAAGGATCCTCTTTCGGCCTCGGATTCTGATTGATGTGAGCAAGATTGACAT 343
|||||| ||||| |||||||| |||||||||||| |||||||||||| ||| ||||| ||
Sbjct 375 CGCTTTTGCAAGAATCCTCTTCCGGCCTCGGATTTTGATTGATGTGAACAAAATTGATAT 434
Query 344 GACAACCACCGTCTTGGGGTTCAAGATCTCGATGCCCATCATGGTTGCTCCTACTGCCAT 403
| | || ||||||||||||||||||||||||||||| ||||||||||||||||||||| |
Sbjct 435 GGCGACTACCGTCTTGGGGTTCAAGATCTCGATGCCGATCATGGTTGCTCCTACTGCCTT 494
Query 404 GCAAAAGATGGCTCACCCTGATGGGGAATATGCTACAGCTAGAGCTGCATCTGCAGCTGG 463
||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||
Sbjct 495 TCAAAAGATGGCTCACCCTGATGGGGAATATGCTACGGCTAGAGCTGCGTCTGCTGCTGG 554
Query 464 AACTATCATGACACTATCTTCATGGGCTACTTCCAGCGTTGAAGAGGTTGCTTCCACAGG 523
||| ||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 555 AACCATCATGACACTATCTTCATGGGCTACTTCAAGTGTTGAAGAAGTTGCTTCCACAGG 614
Query 524 GCCAGGGATCCGATTCTTCCAGCTCTATGTATACAAGAACAGGAATGTGGTTGAGCAGCT 583
|||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 615 GCCAGGAATCCGATTCTTCCAGCTCTATGTATACAAGAACAGGAAGGTGGTTGAGCAGCT 674
Query 584 CGTGAGAAGAGCTGAGAGGGCTGGGTTCAAAGCCATTGCTCTCACTGTAGATACCCCACG 643
|||||||||||| |||| |||||||||||||||||||||||||||||||| |||||| |
Sbjct 675 CGTGAGAAGAGCCGAGAAAGCTGGGTTCAAAGCCATTGCTCTCACTGTAGACACCCCAAG 734
Query 644 GCTAGGCCGCAGAGAGTCTGATATCAAGAACAGATTCACTTTGCCTCCTAACCTGACATT 703
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 735 GCTAGGTCGCAGAGAGTCTGATATCAAGAACAGATTCACTTTGCCTCCAAACCTGACATT 794
Query 704 GAAGAACTTTGAAGGTCTTGACCTCGGAAAGATGGACGAGGC---CA---AT--GA---C 752
|||||||||||||||||||||||| ||||||||||||||||| || || || |
Sbjct 795 GAAGAACTTTGAAGGTCTTGACCTTGGAAAGATGGACGAGGCAAGCATCGATCAGATAGC 854
Query 753 ---T--CT--GGCTTGGCTTCATATGTTGCTGGTCAAATTGACCGTACCTTAAGCTGGAA 805
| || ||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 855 CAATGACTCTGGCTTGGCTTCGTATGTTGCTGGTCAAATTGACCGTACCTTGAGCTGGAA 914
Query 806 GGATGTCCAGTGGCTCCAGACAATCACCAA-ATTGCCGATTCTTGTCAAGGGTGTTCTTA 864
|||| ||||||||||||| ||||||||||| || ||| ||||||||||||||||||||||
Sbjct 915 GGATATCCAGTGGCTCCAAACAATCACCAACAT-GCCAATTCTTGTCAAGGGTGTTCTTA 973
Query 865 CAGGAGAGGATGCAAGGATAGCGATTCAAGCTGGTGCAGCCGGAATCATTGTGTCAAACC 924
|||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |
Sbjct 974 CAGGAGAGGATGCAAGGATAGCGATTCAAGCTGGAGCAGCAGGGATCATTGTGTCAAATC 1033
Query 925 ATGGAGCTCGCCAGCTTGACTATGTCCCAGCAACAATCTCAGCCCTTGAAGAGGTTGTCA 984
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1034 ATGGAGCTCGCCAGCTTGATTATGTCCCAGCAACAATCTCAGCCCTTGAAGAGGTTGTCA 1093
Query 985 AAGCGACACAAGGACGAATTCCTGTCTTCTTGGATGGTGGTGTTCGACGTGGCACTGATG 1044
|||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1094 AAGCAACACAAGGACGAGTTCCTGTCTTCTTGGATGGTGGTGTTCGACGTGGCACTGATG 1153
Query 1045 TCTTCAAGGCACTAGCACTTGGAGCCTCCGGGATATTTATTGGAAGACCAGTGGTATTCT 1104
||||||||||||| |||||||||||||| || ||||||||||||||||||||||| || |
Sbjct 1154 TCTTCAAGGCACTTGCACTTGGAGCCTCTGGAATATTTATTGGAAGACCAGTGGTTTT-T 1212
Query 1105 -CATTGGCTGCTGAAGGAGAGGCTGGAGTCAGAAAGGTGCTTCAAATGCTACGTGATGAG 1163
|| | |||||||||||||| || ||||||| |||||||||||||||| | |||||||||
Sbjct 1213 GCACTAGCTGCTGAAGGAGAAGCCGGAGTCAAAAAGGTGCTTCAAATGTTGCGTGATGAG 1272
Query 1164 TTCGAGCTGACCATGGCACTGAGTGGGTGCCGGTCTCTAAAG-GAAATCTCCCGTAACCA 1222
|||||||| ||||||||||| |||||||||||||| || | | |||||| ||||||||||
Sbjct 1273 TTCGAGCTAACCATGGCACTAAGTGGGTGCCGGTCACTCA-GTGAAATCACCCGTAACCA 1331
Query 1223 CATTACCACCGAATGGGACACTCCACGTCC-TTCGGCCAGGTTATAGAGA-Gaaaaaaac 1280
|||| ||| ||||||||||||||||| || || | |||||||||||||| ||||||||
Sbjct 1332 CATTGTCACGGAATGGGACACTCCACG-CCATTTGCCCAGGTTATAGAGAAGAAAAAAAA 1390
Query 1281 aaca-acaaca 1290
|||| | ||||
Sbjct 1391 AACAGAGAACA 1401
Score = 239 bits (129), Expect = 6e-62
Identities = 144/151 (95%), Gaps = 2/151 (1%)
Strand=Plus/Plus
Query 15 CACACTTGGGAAGATGGAGATCACTAACGTTACCGAGTATGATGCAATCGCAAA-GCAGA 73
||||||| ||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct 243 CACACTTCAGAAGATGGAGATCACTAACGTTACCGAGTATGATGCAATCGCAAAGGC-GA 301
Query 74 AGTTGCCTAAGATGGCATACGACTACTATGCATCTGGTGCAGAAGATCAATGGACTCTTC 133
||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 302 AGTTGCCTAAGATGGTATATGACTACTATGCATCTGGTGCAGAAGATCAATGGACTCTTC 361
Query 134 AAGAGAACAGAAACGCTTTTGCAAGGATCCT 164
||||||||||||||||||||||||| |||||
Sbjct 362 AAGAGAACAGAAACGCTTTTGCAAGAATCCT 392
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 69879158640
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5