BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478868
Length=2290
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14440.1 | Symbols: NCED3, ATNCED3, STO1, SIS7 | nine-cis-ep... 3674 0.0
AT1G30100.1 | Symbols: NCED5, ATNCED5 | nine-cis-epoxycarotenoi... 387 3e-106
> AT3G14440.1 | Symbols: NCED3, ATNCED3, STO1, SIS7 | nine-cis-epoxycarotenoid
dioxygenase 3 | chr3:4831288-4833599 REVERSE
LENGTH=2312
Length=2312
Score = 3674 bits (1989), Expect = 0.0
Identities = 2198/2299 (96%), Gaps = 14/2299 (1%)
Strand=Plus/Plus
Query 1 AAACCAActctctcttctctcttctc-ACT-TGAACAATAAGaaaaaaaaaaaCAGAGCC 58
|||||||||||||||||||||||||| || | | | ||||| |||||||||||||||
Sbjct 1 AAACCAACTCTCTCTTCTCTCTTCTCTCCTCTCTTCTACAAGAAGAAAAAAAACAGAGCC 60
Query 59 TTTACACATCTCAAGATCGAAC-CAATTTAATCACCAAATACTGATTGGACTTTCTTGAA 117
|||||||||||||| ||||||| | ||||| |||||||||||||||| || ||||||
Sbjct 61 TTTACACATCTCAAAATCGAACTTACTTTAACCACCAAATACTGATTGAACACACTTGAA 120
Query 118 AACATGGCTTCTTTCACGGCGACGGCTGCGGTTTCTCGGAGATGGGTTGGTGGCAATCAT 177
|| ||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||||
Sbjct 121 AA-ATGGCTTCTTTCACGGCAACGGCTGCGGTTTCTGGGAGATGGCTTGGTGGCAATCAT 179
Query 178 ACTCAGCCGCCATTATCGTCTTCCCAAAGCTCCGACTTCAGTTATTGTAGCTCCTTACCT 237
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 180 ACTCAGCCGCCATTATCGTCTTCTCAAAGCTCCGACTTGAGTTATTGTAGCTCCTTACCT 239
Query 238 ATGACCAGTCGTGTCACACGAAAGCTCAATGTTTCATCTGCGCTTCACACTCCTCCAGCT 297
||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 240 ATGGCCAGTCGTGTCACACGTAAGCTCAATGTTTCATCTGCGCTTCACACTCCTCCAGCT 299
Query 298 CTTCATTTCCCTAAGCAATCATCAAACTCTCCCGCCATTGTTGTTAACCCCAAAGCCAAA 357
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 300 CTTCATTTCCCTAAGCAATCATCAAACTCTCCCGCCATTGTTGTTAAGCCCAAAGCCAAA 359
Query 358 GAATCCGACACTAAACAGATGAATTTGTTCCAGAGAGCGGCGGCGGCAGCTTTGGACGCG 417
|||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 360 GAATCCAACACTAAACAGATGAATTTGTTCCAGAGAGCGGCGGCGGCAGCGTTGGACGCG 419
Query 418 GCGGAGGGTTTCCTTGTGAGCCACGAGAGGCTACACCCTCTTCCTAAAACGTCTGATCCT 477
||||||||||||||||| |||||||||| ||||||||| |||||||||||| ||||||||
Sbjct 420 GCGGAGGGTTTCCTTGTCAGCCACGAGAAGCTACACCCGCTTCCTAAAACGGCTGATCCT 479
Query 478 AGTGTTCAGATCGCCGGAAATTTTGCTCCGGTGAATGAACAGCCCGTCCGGCGTAATCTT 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 480 AGTGTTCAGATCGCCGGAAATTTTGCTCCGGTGAATGAACAGCCCGTCCGGCGTAATCTT 539
Query 538 CCGGTGGTCGGAAAAATACCTGATTCCATCAAAGGAGTGTATGTGCGCAACGGAGCTAAC 597
||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct 540 CCGGTGGTCGGAAAACTTCCCGATTCCATCAAAGGAGTGTATGTGCGCAACGGAGCTAAC 599
Query 598 CCACTTCACGAGCCGGTGACAGGACACCACTTCTTCGACGGAGACGGTATGGTTCACGCC 657
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 600 CCACTTCACGAGCCGGTGACAGGTCACCACTTCTTCGACGGAGACGGTATGGTTCACGCC 659
Query 658 GTCAAATTCGAAGACGGTTCAGCTAGCTACGCTTGCCGGTTTACTCAGACTAACCGGTTT 717
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 GTCAAATTCGAACACGGTTCAGCTAGCTACGCTTGCCGGTTTACTCAGACTAACCGGTTT 719
Query 718 GTTCAGGAGCGTGAATTGGGTCGACCGGTTTTCCCCAAAGCTATCGGTGAGCTTCACGGC 777
|||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 720 GTTCAGGAACGTCAATTGGGTCGACCGGTTTTCCCCAAAGCCATCGGTGAGCTTCACGGC 779
Query 778 CACACCGGTATTGCCCGACTCATGCTATTCTACGCCAGAGCTGCAGCCGGTATAGTCGAC 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 780 CACACCGGTATTGCCCGACTCATGCTATTCTACGCCAGAGCTGCAGCCGGTATAGTCGAC 839
Query 838 CCGGCACACGGAACCGGTGTAGCCAACGCCGGTTTGGTCTATTTCAACGGCCGGTTATTG 897
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 840 CCGGCACACGGAACCGGTGTAGCTAACGCCGGTTTGGTCTATTTCAATGGCCGGTTATTG 899
Query 898 GCGATGTCGGAGGACGATTTGCCTTACCAAGTTCGGATCACTCCCAGTGGAGATTTAAAA 957
|| ||||||||||| ||||| ||||||||||||| ||||||||||| |||||||||||||
Sbjct 900 GCTATGTCGGAGGATGATTTACCTTACCAAGTTCAGATCACTCCCAATGGAGATTTAAAA 959
Query 958 ACCGTTGGTCGGTTCGATTTTGACGGACAATTGGATTCCACAATGATTGCCCACCCGAAA 1017
||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||
Sbjct 960 ACCGTTGGTCGGTTCGATTTTGATGGACAATTAGAATCCACAATGATTGCCCACCCGAAA 1019
Query 1018 GTCGACCCGGAATCCGGTGAACTCTTCGCTTTAAGTTACGACGTCGTTTCAAAGCCTTAC 1077
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1020 GTCGACCCGGAATCCGGTGAACTCTTCGCTTTAAGCTACGACGTCGTTTCAAAGCCTTAC 1079
Query 1078 CTGAAATACTTCCGATTCTCGCCGGACGGAACTAAATCACCGGACGTCGAGATTCAGCTT 1137
|| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1080 CTAAAATACTTCCGATTCTCACCGGACGGAACTAAATCACCGGACGTCGAGATTCAGCTT 1139
Query 1138 GATCAGCCGACAATGATGCACGATTTCGCGATTACAGAGAACTTCGTCGT-GATACCGGA 1196
|||||||| || |||||||||||||||||||||||||||||||||||||| | |||| ||
Sbjct 1140 GATCAGCCAACGATGATGCACGATTTCGCGATTACAGAGAACTTCGTCGTCG-TACCTGA 1198
Query 1197 CCAGCAAGTCGTTTTCAAGTTGCCGGAGATGATCCGCGGTGGCTCTCCGGTGGTTTACGA 1256
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 1199 CCAGCAAGTCGTTTTCAAGCTGCCGGAGATGATCCGCGGTGGGTCTCCGGTGGTTTACGA 1258
Query 1257 CAAGAACAAGGTCTCAAGATTCGGAATTTTAGACAAATACGCCGAAGATTCATCGAATAT 1316
||||||||||||| |||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1259 CAAGAACAAGGTCGCAAGATTCGGGATTTTAGACAAATACGCCGAAGATTCATCGAACAT 1318
Query 1317 TAAGTGGATTGATGCGCCTGACTGCTTCTGCTTCCATCTCTGGAACGCTTGGGAAGAGCC 1376
||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||
Sbjct 1319 TAAGTGGATTGATGCTCCAGATTGCTTCTGCTTCCATCTCTGGAACGCTTGGGAAGAGCC 1378
Query 1377 AGAAACAGAGGAAGTCGTCGTGATCGGGTCGTGTATGACTCCACCAGACTCAATTTTCAA 1436
||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1379 AGAAACAGATGAAGTCGTCGTGATAGGGTCCTGTATGACTCCACCAGACTCAATTTTCAA 1438
Query 1437 CGAGTCTGACGAGAATCTCAAGAGTGTCCTCTCTGAAATCCGCCTGAATCTCAAAACCGG 1496
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1439 CGAGTCTGACGAGAATCTCAAGAGTGTCCTGTCTGAAATCCGCCTGAATCTCAAAACCGG 1498
Query 1497 TGAATCAACTCGCCGTCCGATCATCGCCGACGAAGATCAACAAGTCAACCTCGAAGCAGG 1556
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 1499 TGAATCAACTCGCCGTCCGATCATCTCCAACGAAGATCAACAAGTCAACCTCGAAGCAGG 1558
Query 1557 GATGGTCAACAGAAACATGCTCGGCCGGAAAACAAAATTCGCTTACTTGGCTTTAGCCGA 1616
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 1559 GATGGTCAACAGAAACATGCTCGGCCGTAAAACCAAATTCGCTTACTTGGCTTTAGCCGA 1618
Query 1617 GCCATGGCCTAAAGTCTCAGGATTCGCTAAAGTTGATCTCACTACCGGAGAAGTCAAGAA 1676
||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1619 GCCGTGGCCTAAAGTCTCAGGATTCGCTAAAGTTGATCTCACTACTGGAGAAGTTAAGAA 1678
Query 1677 ACATCTCTACGGCGATAACCGTTACGGAGGAGAGCCTCTGTTTCTCCCCGGAGAAGGAGG 1736
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1679 ACATCTTTACGGCGATAACCGTTACGGAGGAGAGCCTCTGTTTCTCCCCGGAGAAGGAGG 1738
Query 1737 AGAAGAAGACGAAGGACACATCCTCTGTTTCGTTCACGACGAAAAGACATGGAAATCGGA 1796
||| |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1739 AGAGGAAGACGAAGGATACATCCTCTGTTTCGTTCACGACGAGAAGACATGGAAATCGGA 1798
Query 1797 GTTACAGATAGTTAACGCCGTTAGCTTGGAGGTTGAAGCAACGGTTAAACTTCCGTCAAG 1856
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1799 GTTACAGATAGTTAACGCCGTTAGCTTAGAGGTTGAAGCAACGGTTAAACTTCCGTCAAG 1858
Query 1857 GGTTCCGTACGGATTTCACGGTACATTCATCGGAGCAGATGATTTGGCTAAGCAGGTCGT 1916
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 1859 GGTTCCGTACGGATTTCACGGTACATTCATCGGAGCCGATGATTTGGCGAAGCAGGTCGT 1918
Query 1917 GTGAGTTCTTATGTGTATATACACACAAAATACGTATACGTGATGAAGAAGCTTCTAGAA 1976
||||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||
Sbjct 1919 GTGAGTTCTTATGTGTAAATACGCACAAAATACATATACGTGATGAAGAAGCTTCTAGAA 1978
Query 1977 G-AAAAGAGAGAGCGAGATTTACCAGTGGGATGCTCTGCATATACGTCCCCGGAATCTGC 2035
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1979 GGAAAAGAGAGAGCGAGATTTACCAGTGGGATGCTCTGCATATACGTCCCCGGAATCTGC 2038
Query 2036 TCCTCTGtttttttttgt--gctctgtttctttggttgttgtttcttttggggtgcggtt 2093
|||||||||||||||| | |||||||||||| | |||||||||||||||||||||||||
Sbjct 2039 TCCTCTGTTTTTTTTTTTTTGCTCTGTTTCTT-GTTTGTTGTTTCTTTTGGGGTGCGGTT 2097
Query 2094 tgctagttccctttttttttGGGGTCAATCTAGAAATCTGAAAGATTTTGAGGGACCAGT 2153
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2098 TGCTAGTTCCCTTTTTTTT-GGGGTCAATCTAGAAATCTGAAAGATTTTGAGGGACCAGC 2156
Query 2154 TTGTAGCTTTTGGGCTGTAGGGTAGCCTAGCCGTTTCGAGCTCAGCTGGTTTCTGTTATT 2213
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2157 TTGTAGCTTTTGGGCTGTAGGGTAGCCTAGCCGTT-CGAGCTCAGCTGGTTTCTGTTATT 2215
Query 2214 CTTTCACTTATTGTTCATCGTAATGAGAAGTATATAAA-TATTAAACAA-AAAGATATGT 2271
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||
Sbjct 2216 CTTTCACTTATTGTTCATCGTAATGAGAAGTATATAAAATATTAAACAACAAAGATATGT 2275
Query 2272 TTATATATGTGCATGTATT 2290
|| |||||||||||| |||
Sbjct 2276 TTGTATATGTGCATGAATT 2294
> AT1G30100.1 | Symbols: NCED5, ATNCED5 | nine-cis-epoxycarotenoid
dioxygenase 5 | chr1:10571340-10573365 FORWARD LENGTH=2026
Length=2026
Score = 387 bits (209), Expect = 3e-106
Identities = 1020/1401 (73%), Gaps = 97/1401 (7%)
Strand=Plus/Plus
Query 534 TCT-TCCGGTGGTCGGAAAAATACCTGATTCCATCAAAGGAGTGTATGTGCGCAACGGAG 592
||| |||| || | |||||||| ||||| | ||| | || || || | || ||||| |
Sbjct 427 TCTCTCCGTTGAT-GGAAAAATCCCTGACTGCATTGACGGTGTTTACCTCCGTAACGGCG 485
Query 593 CTAACCCACTTC-ACGAGCCGGTGACAGGACACCACTTCTTCGACGGAGACGGTATGGTT 651
|||| |||| || |||||| || | || || ||| | |||||||| ||||||||||||
Sbjct 486 CTAATCCAC-TCTTCGAGCCAGTTTCTGGTCATCACCTATTCGACGGTGACGGTATGGTT 544
Query 652 CACGCCGTCAAATTCGA--AGACGGTTCA-GCTAGCTACGCTTGCCGGTTTACTCAGACT 708
|||||||| ||| || | | |||| | || || ||| | ||||||||||| | ||
Sbjct 545 CACGCCGTTAAAATC-ACTA-ACGG-AGACGCGAGTTACTCGTGCCGGTTTACGGAAACC 601
Query 709 AACCGGTTTGTTCAGGAGCGTGAA-TTGGGTCGACCGGTTTTCCCCAAAGCTATCGGTGA 767
| | || ||||| ||| || | || || ||| ||||||| |||||||| |||||
Sbjct 602 GAGAGATTGGTTCAAGAGAAACAACTCGGTTC-TCCGATTTTCCCTAAAGCTATAGGTGA 660
Query 768 GCTTCACGGCCACACCGGTATTGCCCGACTCATGCTATTCTACGCCA-GAGCTGCAGCCG 826
||| || || ||| | || || || || | |||||||| |||| || | | | | ||
Sbjct 661 GCTACATGGTCACTCTGGAATCGCACGGTTGATGCTATTTTACG-CACGTGGTTTATTCG 719
Query 827 GTATAGTCGA-CCCGGCACACGGAACCGGTGTAGCCAACGCCGGTTTGGTCTATTTCAAC 885
|| || | | | | | |||||||||| || || |||||||||||||| || ||| ||
Sbjct 720 GTTTATTAAATCAC-AAAAACGGAACCGGAGTTGCTAACGCCGGTTTGGTTTACTTCCAC 778
Query 886 GGCCGGTTATTGGCGATGTCGGAGGACGATTTGCCTTACCAAGTTCG-GATCACTCCCAG 944
| ||||||||| || ||||| || || ||| | |||||||||||||| | ||||| ||
Sbjct 779 GACCGGTTATTAGCTATGTCTGAAGATGATCTACCTTACCAAGTTCGTG-TCACTGACAA 837
Query 945 TGGAGATTTAAAAACCGTTGGTCGGTTCGATTTTGACGGACAA-TTGGATTCCACAATGA 1003
||| |||||| | ||| | || | |||||||| ||||||||| | | ||| | ||||
Sbjct 838 TGGCGATTTAGAGACCATCGGAAGATTCGATTTCGACGGACAACTAAG-CTCCGCCATGA 896
Query 1004 TTGCCCACCCGAAAG-TCGACCCGG-AATCCG--GTGAACTCTTCGCTTTAAGTTACGAC 1059
| || |||||| ||| | || |||| || || | || || || || || || ||||||
Sbjct 897 TCGCTCACCCG-AAGATTGATCCGGTAA--CGAAG-GAGCTATTTGCGTTGAGCTACGAC 952
Query 1060 GTCGTTTCA-AAGCCTTACCTGAAATACTTCCGATTCTCGCCGGACGG-AACTAAATCAC 1117
|||| || | || || || |||||||||| |||||||||||| || | |||||||
Sbjct 953 GTCG-TTAAGAAACCGTATTTGAAATACTTTAAATTCTCGCCGGAAGGTGA-GAAATCAC 1010
Query 1118 CGGACGTCGAGATTCAGCTTGATCAG-CCGACAATGATGCACGATTTCGCGATTACAGAG 1176
||||||| ||||||| || | ||| ||||| |||||||||||||||||||| || |||
Sbjct 1011 CGGACGTTGAGATTCCTCTCG-CCAGTCCGACGATGATGCACGATTTCGCGATCACTGAG 1069
Query 1177 AACTTCGTCGTGATACCGGACCAGCAAGTCGT-TTTCAAG-T-TGCCGGAGATGATCCGC 1233
|| ||||| ||||| ||||| || ||||| || ||| ||| | | || || ||| | |
Sbjct 1070 AATTTCGTTGTGATTCCGGATCAACAAGTTGTGTTT-AAGCTCT-CC-GATATGTTTCTT 1126
Query 1234 GGTG-GCTCTCCGGTGGTTTACGACAAGA-ACAAGGTCTCAAGATTCGGAATTTTAGAC- 1290
|| | |||||||| |||||| || | || | || | || |||||||| | |
Sbjct 1127 GG-GAAATCTCCGGTTAAATACGAC-GGAGAGAAAATTTCCCGGTTTGGAATTTT-GCCT 1183
Query 1291 A-AATACGCCGAAGATTCATCGAATATTAAGTGGATTGATG-CGCC--TGACTGCTTCTG 1346
| || |||| ||||| | ||| | || ||| |||| | | || |||| || ||
Sbjct 1184 AGAA-ACGCTAAAGATGCGTCGGAGATGGTTTGGGTTGA-GTCACCGGAGACT--TTTTG 1239
Query 1347 CTTCCATCTCTGGAACGCTTGGGAAG--AGCCAGAAACAGAGGAAGTCGTCGTGATCGGG 1404
|||||||| ||||||||||||| || | || || ||||| || || || ||||||||
Sbjct 1240 TTTCCATCTTTGGAACGCTTGGG-AGTCA-CCGGAGACAGACGAGGTTGTAGTGATCGGA 1297
Query 1405 TCGTGTATGACTCCACCAGACTCAATTTTCAACGAGT-CTGACGAGAATCTCAAGAGTGT 1463
|| || |||||||| | || || || |||||||||| | || ||| | ||||| |||||
Sbjct 1298 TCTTGCATGACTCCGGCGGATTCGATCTTCAACGAGTGC-GATGAGCAGCTCAACAGTGT 1356
Query 1464 CCTCTCTGAAATCCGCCTGAATCTCAAAACCGGTG-AATCAACTCGCCGTCCGATCA-TC 1521
| || || ||||| | |||||||||||||| | |||| || ||| | | || | ||
Sbjct 1357 TTTATCAGAGATCCGGTTAAATCTCAAAACCGG-GAAATCCACACGCAGAACTATAATTC 1415
Query 1522 GCC-G-ACGAAGATCAACAAGTCAACCTCGAAGCAGGGATGGTCAACAGAAA-CATGCTC 1578
|| | || | || | | | || || ||||| || ||||| ||| |||| | | |||
Sbjct 1416 -CCGGTTCG--GTTC-A-GA-TGAATCTTGAAGCTGGTATGGTAAACCGAAATC-TTCTC 1468
Query 1579 GGCCGGAAAACAAAATTCGCTTACTTGGCTTTAGCCGAGCCATGGCCTAAAGTCTCAGGA 1638
|| ||||||| | ||| ||| | || |||| || || ||||||||||||||||||
Sbjct 1469 GGGAGGAAAACCCGGTACGCATACCTAGCCATAGCTGAACCGTGGCCTAAAGTCTCAGGA 1528
Query 1639 TTCGCTAAAGTTGATCTCACTACCGGAGAAGTCAAGAAA-CATCTCT-ACGGCGATAACC 1696
||||||||||||||||| ||||||||||||| || ||| || || | |||||| |||
Sbjct 1529 TTCGCTAAAGTTGATCTTTCTACCGGAGAAGTGAA-AAATCA-CTTTTACGGCGGTAAAA 1586
Query 1697 GTTACGGAGGAGAGCCTCTGTTTCTCCCCGGAGAAGG--AGGA---GA---AGAAGACGA 1748
||||| || || ||| | ||||| || ||| || || | || |||||| ||
Sbjct 1587 AATACGGTGGTGAACCTTT-TTTCTTACCT-AGAGGGTTAGAATCTGACGGAGAAGATGA 1644
Query 1749 AGGACACATCCTCT-GTTTCGTTCACGACGAAAAGACATGGAAATCGGAG-TTACAGATA 1806
|| |||| | | |||| ||||||||||| ||| ||| |||||||| || || ||
Sbjct 1645 CGGTTACATTATGTCGTTT-GTTCACGACGAGGAGAGTTGGGAATCGGAGCTT-CATATT 1702
Query 1807 GTTAACGCCGTTA-GCTTGGAGGTTGAAGCAACGGTTAAACTT-CCGTCAAGGGTTCCGT 1864
||||||||||||| | ||||| | |||||||| |||||| || |||||||| || ||||
Sbjct 1703 GTTAACGCCGTTACG-TTGGAACTAGAAGCAACCGTTAAA-TTGCCGTCAAGAGTACCGT 1760
Query 1865 ACGGATTTC-ACGGTACATTC 1884
| || |||| |||| || |||
Sbjct 1761 ATGG-TTTCCACGGCACTTTC 1780
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 113654033880
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5