BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg478884
Length=2355
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14720.1 | Symbols: ATMPK19, MPK19 | MAP kinase 19 | chr3:49... 3404 0.0
AT1G53510.1 | Symbols: ATMPK18, MPK18 | mitogen-activated prote... 1483 0.0
> AT3G14720.1 | Symbols: ATMPK19, MPK19 | MAP kinase 19 | chr3:4945601-4949042
FORWARD LENGTH=2389
Length=2389
Score = 3404 bits (1843), Expect = 0.0
Identities = 2225/2398 (93%), Gaps = 71/2398 (3%)
Strand=Plus/Plus
Query 1 tttttttttGAGGAAACAACAAAATTAGAATACACGGAAATTAAAGAAAAGAAAGAAATC 60
||||||||||| |||||||||||||||||||||||||||||| || |||||||||
Sbjct 2 TTTTTTTTTGAAGAAACAACAAAATTAGAATACACGGAAATT------AA-AAAGAAATC 54
Query 61 ACATTGGTTGTATTATATAAATCACATTTCTGATCTTCAGATTCCTTT-TTAT-CAATCC 118
||| ||| ||||| ||| |||||||| ||||||||||| ||| || | | ||||
Sbjct 55 ACA----TTG-CTTATA-AAA--ACATTTCTCATCTTCAGATT--TTTATTTTCCTATCC 104
Query 119 GTCTTTTCTCCGATCGCTGGATCTTGAGGATCTCTAGATTTTCTCA-----------T-- 165
||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 105 GTCTTTTCTCCGATCGCTGGATCTTGAAGATCTCTAGATTTTCTCATCTCTCTCTGTTCA 164
Query 166 ----CTC----T-G-TAGAG-TCCTCTGGTTTTCGGAGTTCTTGTGAGAGAATCTAGGG- 213
||| | | ||||| || |||| |||||||||||||||| ||||||||||||
Sbjct 165 CGGACTCTGTGTAGATAGAGTTCGTCTGTTTTTCGGAGTTCTTGT--GAGAATCTAGGGT 222
Query 214 TTTTCTGGTAAATCTCGATCGGGTTTTGCTTTCTGGGA--ttttttt--GATTTGTGATT 269
|||| | |||||||||||||||||||| |||||| || ||||||| ||||||||||
Sbjct 223 TTTTTTCTTAAATCTCGATCGGGTTTTGGTTTCTGTGATTTTTTTTTAAAATTTGTGATT 282
Query 270 CGAAGAATTGCCATTTTCTTTGATTACTTC--ATTTTTT-ATTGCGATCTCTAAC-GAGA 325
|||||||||||||||||||||||||| || ||||||| |||||||||||| || |||
Sbjct 283 CGAAGAATTGCCATTTTCTTTGATTA-GTCATATTTTTTAATTGCGATCTCT-ACATAGA 340
Query 326 GATCATTGAGGGGTTTTATTAAATTGGA-TTTTTGAAATTGAGGAAGACGATAGAGTTGT 384
|||||| |||||| ||| |||||||| | ||||||||||||| |||||||||||||||||
Sbjct 341 GATCATCGAGGGG-TTT-TTAAATTGAATTTTTTGAAATTGACGAAGACGATAGAGTTGT 398
Query 385 TGAGCGGTATTGATCTTCTGGTGTGAA-A-TATTTG-GTCATCt-ttttttATTTAAAGA 440
||||||||||||||||| ||||||||| | | | | || | | ||| |||| ||||
Sbjct 399 TGAGCGGTATTGATCTTTTGGTGTGAAGACGA-TAGAGT--T-TAAATTTGATTTGAAGA 454
Query 441 GGATGCAACAAAGTCAGGAGAAGAAGAACATGAAAGAGATGGAGTTTTTCACTGAGTATG 500
|||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 GGATGCAAAAAACTCAGGAGAAGAAGAACATGAAAGAGATGGAGTTTTTCACTGAGTATG 514
Query 501 GTGATGCAAACCGTTATCGGATTCTTGAAGTCATTGGGAAAGGAAGCTATGGAGTTGTTT 560
||||||| || |||||||||||||||||||| |||||||||||||||||||||||||| |
Sbjct 515 GTGATGCTAATCGTTATCGGATTCTTGAAGTTATTGGGAAAGGAAGCTATGGAGTTGTAT 574
Query 561 GTGCAGCTATTGATACACATACAGGAGAGAAAGTTGCGATAAAGAAGATTAATGATGTCT 620
||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| |
Sbjct 575 GTGCAGCTATTGATACACAAACAGGAGAGAAAGTTGCTATTAAGAAGATTAATGATGTTT 634
Query 621 TTGAACATGTCTCTGATGCTCTTCGTATCCTCCGTGAGGTTAAGCTTCTGCGGCTTCTTA 680
|||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct 635 TTGAGCATGTCTCTGATGCTCTTCGTATTCTCCGTGAGGTTAAGCTTCTACGGCTTCTTA 694
Query 681 GGCACCCTGATATTGTTGAAATCAAAAGCATCATGCTTCCGCCTTCTAAGAGGGAGTTTA 740
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 695 GGCACCCTGATATAGTTGAAATCAAAAGTATCATGCTTCCGCCTTCTAAGAGGGAGTTTA 754
Query 741 AAGATATTTATGTGGTTTTTGAGCTCATGGAATCGGATCTTCACCAAGTCATCAAAGCTA 800
||||||| ||||| |||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 755 AAGATATATATGTTGTTTTTGAGCTCATGGAATCAGATCTTCATCAAGTCATCAAAGCTA 814
Query 801 ACGATGATTTGACTCGTGAACACCACCAGTTTTTTCTTTATCAGATGCTTCGTGCTTTGA 860
| ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 815 ATGATGATTTGACTCGTGAGCATCACCAGTTTTTTCTTTATCAGATGCTTCGTGCTTTGA 874
Query 861 AGTATATGCATACAGCTAATGTTTACCATCGCGATCTTAAACCGAAGAACATATTGGCAA 920
||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||||
Sbjct 875 AGTATATGCATACAGCTAATGTTTACCATCGTGATCTTAAACCCAAGAACATACTGGCAA 934
Query 921 ATGCAAACTGCAAGTTGAAAGTCTGTGACTTTGGACTAGCAAGAGTGTCGTTTAATGATA 980
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 935 ATGCAAACTGCAAGTTGAAAGTCTGTGACTTTGGACTTGCAAGAGTGTCGTTTAATGATA 994
Query 981 CACCTACAACAGTCTTTTGGACGGATTATGTTGCCACAAGATGGTACAGGGCACCGGAGC 1040
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 995 CACCTACGACAGTCTTTTGGACGGATTATGTTGCCACAAGATGGTACAGGGCACCTGAGC 1054
Query 1041 TCTGTGGATCATTCTGTTCTAAGTATACTCCAGCAATTGACATTTGGAGCATTGGCTGCA 1100
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1055 TCTGTGGATCATTCTGTTCTAAGTATACTCCAGCAATTGACATTTGGAGCATTGGCTGCA 1114
Query 1101 TCTTCGCTGAGGTATTAACAGGGAAGCCTTTGTTTCCTGGAAAAAGTGTCGTCCATCAGT 1160
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1115 TCTTCGCTGAGGTATTAACAGGGAAGCCTTTGTTTCCAGGAAAAAGTGTTGTCCATCAGT 1174
Query 1161 TAGACTTGATTACCGATCTTCTTGGCACACCAAAATCAGAAACCATTGCTGGAGTTCGAA 1220
|||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||
Sbjct 1175 TAGACTTGATTACCGATCTTCTTGGCACACCAAAATCAGAGACCATTGCTGGGGTGCGAA 1234
Query 1221 ATGAAAAGGCTAGAAAATATTTGAACGAAATGAGGAAGAAAAATCTTGTCCCCTTTTCGC 1280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1235 ATGAAAAGGCTAGAAAATATTTGAACGAAATGAGGAAGAAAAATCTTGTCCCCTTTTCGC 1294
Query 1281 AAAAGTTTCCTAACGCCGATCCTTTAGCATTGCGCCTTTTGCAAAGACTGTTGGCTTTTG 1340
|||||||||||||||| ||||||||||||||||| ||| |||||||||||||||||||||
Sbjct 1295 AAAAGTTTCCTAACGCAGATCCTTTAGCATTGCGTCTTCTGCAAAGACTGTTGGCTTTTG 1354
Query 1341 ATCCAAAGGATAGGCCGACTGCTGCAGAGGCGCTGGCTGATCCTTACTTTAAGGT-CCTT 1399
|||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||
Sbjct 1355 ATCCAAAGGATAGGCCGACTGCTGCAGAGGCGCTGGCTGATCCTTATTTTAA-GTGCCTT 1413
Query 1400 GCTAAGGTTGAAAGAGAACCTTCTTGTCAGCCGATCTCGAAGATGGAATTTGAGTTTGAA 1459
|||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct 1414 GCTAAGGTTGAAAGAGAACCCTCTTGTCAGCCGATTTCGAAGATGGAATTTGAGTTTGAA 1473
Query 1460 AGACGACGGTTGACAAAGGATGATATTAGAGAACTAATATACAGGGAGATACTAGAATAC 1519
||| || |||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1474 AGAAGAAGGTTGACAAAGGATGACATTAGAGAACTAATATACAGGGAGATACTGGAATAC 1533
Query 1520 CATCCGCAGCTGCTCAAGGATTATATGAACTCTGAAGGCTCAAATTTTCTATATCCTAGT 1579
||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1534 CATCCACAGCTGCTCAAGGATTATATGAACTCTGAAGGCTCAAGTTTTCTATATCCTAGT 1593
Query 1580 GCCATTGGTCATTTGAGAAAACAATTTGCATACCTAGAGGAAAATAGTGGCAAAAGTGGG 1639
||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1594 GCCATCGGTCATTTGAGGAAACAATTTGCGTACCTAGAGGAAAATAGTGGCAAAAGTGGG 1653
Query 1640 CCAGTCATACCTCCAGACAGGAAGCATGCTTCACTTCCTCGATCTACAGTTCACTCCAGT 1699
|||||||||||||||||||||||||||||||||||||| |||||| ||||||| ||||||
Sbjct 1654 CCAGTCATACCTCCAGACAGGAAGCATGCTTCACTTCCACGATCTGCAGTTCATTCCAGT 1713
Query 1700 GCAGTTAACTCCAACGCTCAACCCAGCTTAAACGCATCAGACAGTCGACGTGTTTCTATC 1759
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1714 GCAGTAAACTCCAACGCTCAACCCAGTTTAAACGCATCAGACAGTCGACGTGTTTCTATC 1773
Query 1760 GAGCCTTCAAGAAATGGAGTAGTTCCATCAACTTCAGCATATTCAACAAAACCTATAGGG 1819
|| ||||||||||||||||| |||||||||||||||||||||||||| |||||| |||||
Sbjct 1774 GAACCTTCAAGAAATGGAGTGGTTCCATCAACTTCAGCATATTCAACTAAACCTTTAGGG 1833
Query 1820 CCTCCACCAAGAGTGCCATCAGGTAGACCAGGCCGCATTGTGGAATCATCTGTAACTTAT 1879
|||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 1834 CCTCCACCAAGAGTACCATCAGGTAAACCAGGCCGTGTTGTGGAATCATCTGTAACTTAT 1893
Query 1880 GAAAATGACAGAAACCTTAAAGAGTCGTCCTATGATGCAAGGACATCATATTACAGAAGC 1939
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1894 GAAAATGACAGAAACCTCAAAGAGTCGTCCTATGATGCAAGGACATCATATTACAGAAGC 1953
Query 1940 ACGGTACTCCCTCCACAGACCGTATCTCCTAACTGTTTCTTCCATCCTAACACCATGAAC 1999
|| |||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||
Sbjct 1954 ACAGTACTCCCTCCACAGACCGTATCTCCTAACTGTTACTTCCTTCCAAACACCATGAAT 2013
Query 2000 CAAGAGAAGCGTGGTGGTACAGAAGCTGCATCTCAGCCAAAACCGCAGTTTGTCCCCACC 2059
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2014 CAAGAGAAGCGCAGTGGTACAGAAGCTGCATCTCAGCCAAAACCGCAGTTTGTCCCCACC 2073
Query 2060 CAATGCAACTCTGCCAAACCAGCTGAGCTGAACCCAAACCCTTATGTCCAATCACAACAC 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2074 CAATGCAACTCTGCCAAACCAGCTGAGCTGAACCCAAACCCTTATGTCCAATCACAACAC 2133
Query 2120 AAGGTGGGTATTGATGCTAAGCTGCTGCATGCACAATCCCAATATGGTCCTGCTGGAGCC 2179
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2134 AAGGTGGGTATTGATGCTAAGCTGTTGCATGCACAATCCCAATATGGTCCTGCTGGAGCC 2193
Query 2180 GCCGCGGTTGCAGTAGCAGCACACCGGAACATTGGCGCTGTTGGGTATGGCATGTCTTAG 2239
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2194 GCCGCGGTTGCAGTAGCAGCACACCGGAACATTGGAGCTGTTGGGTATGGCATGTCTTAG 2253
Query 2240 AATTTAGCATATTGGCGCTGTTGGCTATTGCCAGAAACTCTTCTTGTTA--GTCGTTTTG 2297
||||||||| |||||||||||||||||||||||||||||| |||||||| |||||| ||
Sbjct 2254 AATTTAGCACATTGGCGCTGTTGGCTATTGCCAGAAACTCCTCTTGTTATAGTCGTTATG 2313
Query 2298 TGATGTAAGTATTATTCGATCAAGCCTGATTTGAACACATTTGAGATTGTAATAAAAA 2355
| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2314 TAATGTAAGTATTATTCGATCAGGCCTGATTTGAACACATTTGAGATTGTAATAAAAA 2371
> AT1G53510.1 | Symbols: ATMPK18, MPK18 | mitogen-activated protein
kinase 18 | chr1:19970664-19974393 REVERSE LENGTH=2380
Length=2380
Score = 1483 bits (803), Expect = 0.0
Identities = 1272/1496 (85%), Gaps = 42/1496 (3%)
Strand=Plus/Plus
Query 437 AAGAGGATGCAACAAAGTCAGGAGAAGAAGAACATGAAAGAGATGGAGTTTTTCACTGAG 496
|||| ||||||||||| ||| | ||||||| || ||||||||||||||||||||| |||
Sbjct 230 AAGAAGATGCAACAAAATCAAGTGAAGAAGGGCACGAAAGAGATGGAGTTTTTCACAGAG 289
Query 497 TATGGTGATGCAAACCGTTATCGGATTCTTGAAGTCATTGGGAAAGGAAGCTATGGAGTT 556
||||||||||||||| | ||| ||||||| ||||| ||||| ||||||||||||||||||
Sbjct 290 TATGGTGATGCAAACAGATATAGGATTCTGGAAGTTATTGGTAAAGGAAGCTATGGAGTT 349
Query 557 GTTTGTGCAGCTATTGATACACATACAGGAGAGAAAGTTGCGATAAAGAAGATTAATGAT 616
|| ||||||||||||||||||||||| |||||||||||||| || |||||||||||||||
Sbjct 350 GTGTGTGCAGCTATTGATACACATACTGGAGAGAAAGTTGCTATTAAGAAGATTAATGAT 409
Query 617 GTCTTTGAACATGTCTCTGATGCTCTTCGTATCCTCCGTGAGGTTAAGCTTCTGCGGCTT 676
|||||||||||| | |||||||| |||||||| |||||||| || |||||||| ||||||
Sbjct 410 GTCTTTGAACATATTTCTGATGCGCTTCGTATTCTCCGTGAAGTGAAGCTTCTTCGGCTT 469
Query 677 CTTA-GGCACCCTGATATTGTTGAAATCAAAAGCATCATGCTTCCGCCTTCTAAGAGGGA 735
||| |||| ||||||||||| || ||||||||||| ||||| || ||||||||||| ||
Sbjct 470 -TTACGGCATCCTGATATTGTGGAGATCAAAAGCATTATGCTGCCTCCTTCTAAGAGAGA 528
Query 736 GTTTAAAGATATTTATGTGGTTTTTGAGCTCATGGAATCGGATCTTCACCAAGTCATCAA 795
|||||||||||| ||||| || ||||||||||||||||| |||||||| ||||| || ||
Sbjct 529 GTTTAAAGATATCTATGTTGTGTTTGAGCTCATGGAATCAGATCTTCATCAAGTTATTAA 588
Query 796 AGCTAACGATGATTTGACTCGTGAACACCACCAGTTTTTTCTTTATCAGATGCTTCGTGC 855
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 589 AGCTAATGATGATTTGACTCGTGAACACCACCAGTTTTTCCTTTATCAGATGCTTCGTGC 648
Query 856 TTTGAAGTAT-ATGCATACAGCTAATGTTTACCATCGCGATCTTAAACCGAAGAACATA- 913
||| |||| | |||||||||||||||||||| || || |||||||| || ||||| |||
Sbjct 649 TTTAAAGT-TCATGCATACAGCTAATGTTTATCACCGTGATCTTAAGCCAAAGAATATAC 707
Query 914 TTGGCAAATGCAAACTGCAAGTTGAAAGTCTGTGACTTTGGACTAGCAAGAGT-GTCGTT 972
||| |||| ||||| |||||||||||||| |||||||||||| | || ||||| | ||||
Sbjct 708 TTG-CAAACGCAAATTGCAAGTTGAAAGTTTGTGACTTTGGATTGGCTAGAGTAG-CGTT 765
Query 973 TAATGATACACCTACAACAGTCTTTTGGACGGATTATGTTGCCACAAGATGGTACAGGGC 1032
||||||||| ||||| ||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 766 TAATGATACTCCTACGACAGTCTTTTGGACGGACTATGTTGCCACAAGATGGTATAGAGC 825
Query 1033 ACCGGAGCTCTGTGGATCATTCTGTTCTAAGTATACTCCAGCAATTGACATTTGGAGCAT 1092
||| ||||||||||||||||||| ||| ||||| |||||||| || ||| ||||||||||
Sbjct 826 ACCTGAGCTCTGTGGATCATTCTTTTCGAAGTACACTCCAGCTATCGACGTTTGGAGCAT 885
Query 1093 TGGCTGCATCTTCGCTGAGGTATTAACAGGGAAGCCTTTGTTTCCTGGAAAAAGTGTCGT 1152
|||||||||||| || |||||| ||||||||||||| |||||||| ||||||||||| ||
Sbjct 886 TGGCTGCATCTTTGCAGAGGTACTAACAGGGAAGCCATTGTTTCCGGGAAAAAGTGTTGT 945
Query 1153 CCATCAGTTAGACTTGATTACCGATCTTCTTGGCACACCAAAATCAGAAACCATTGCTGG 1212
||||||||| || |||||||| ||||||||||||||||||||||||||||| ||| ||||
Sbjct 946 CCATCAGTTGGAGTTGATTACTGATCTTCTTGGCACACCAAAATCAGAAACAATTTCTGG 1005
Query 1213 AGTTCGAAATGA-AAAGGCTAGAAAATATTTGAAC-GAAATGAGGAAGAAAAATCTTGTC 1270
|||||| ||||| |||| |||||||||| |||| | ||||||||||||||||||| ||||
Sbjct 1006 AGTTCGTAATGATAAAG-CTAGAAAATACTTGA-CTGAAATGAGGAAGAAAAATCCTGTC 1063
Query 1271 CCCTTTTCGCAAAAGTTT-CCTAACGCCGATCCTTTAGCATTGCGCCTTTTGCAAAGACT 1329
|||| |||||||| ||| || || || ||||| |||||| | || |||||||| || ||
Sbjct 1064 ACCTTCTCGCAAAAATTTTCCAAA-GCAGATCCATTAGCACTCCGTCTTTTGCAGAGGCT 1122
Query 1330 GTTGGCTTTTGATCCAAAGGATAGGCCGACTGCTGCAGAGGCGCTGGCTGATCCTTACTT 1389
||||||||| |||||||||||| | |||||| |||||||||| | ||||||||||||||
Sbjct 1123 GTTGGCTTTCGATCCAAAGGATCGACCGACTCCTGCAGAGGCATTAGCTGATCCTTACTT 1182
Query 1390 TAAGG-TCCTTGCTAAGGTTGAAAGAGAACCTTCTTGTCAGCCGATCTCGAAGATGGAAT 1448
|||| || || ||||| |||||||||||||||| |||||| |||||||| ||||| |
Sbjct 1183 CAAGGGTCTTT-CTAAGATTGAAAGAGAACCTTCAAGTCAGCAAATCTCGAAAATGGAGT 1241
Query 1449 TTGAGTTTGAAAGACGACGGTTGACAAAGGATGATATTAGAGAACTAATATACAGGGAGA 1508
|||| ||||| || ||| ||||||||||||| || |||||||||||||||||||| || |
Sbjct 1242 TTGAATTTGAGAGGCGAAGGTTGACAAAGGACGACATTAGAGAACTAATATACAGAGAAA 1301
Query 1509 TACTAGAATACCATCCGCAGCTGCTCAAGGATTATATGAAC---TCTGAAGGCTCAAATT 1565
|||| || |||||||| ||| |||||||||| ||||||| | ||||| || || ||||
Sbjct 1302 TACTGGAGTACCATCCTCAGTTGCTCAAGGACTATATGAGCGGATCTGAGGGGTCTAATT 1361
Query 1566 TTCTATATCCTAGTGCCATTGGTCAT-TTGAGAAAACAATTTGCATACCTAGAGGAAAAT 1624
|| |||||||||| |||||||| ||| || ||| | || || | ||| |||||||||||
Sbjct 1362 TTGTATATCCTAGCGCCATTGGACATCTT-AGACAGCAGTTCACTTACTTAGAGGAAAAT 1420
Query 1625 AGTGGCA-AAAGTGGGCCAGTCATACCTC-CAGACAGGAAGCATGCTTCACTTCCTCGAT 1682
|| | | ||| |||||| |||||||||| | || ||||| || || ||||| || || |
Sbjct 1421 AGCAGTAGAAA-TGGGCCGGTCATACCTCTC-GAGAGGAAACACGCATCACTACCGCGGT 1478
Query 1683 CTACAGTTCACTCCAGTGCAGTTAACTCCAACGCTCAACCCAGCTTAAACGCATCAGACA 1742
|||| |||||||| | || ||| | |||| | | ||||||| ||| ||| |||| |
Sbjct 1479 CTACGGTTCACTCAACTGTAGTCCATTCCACCTCGCAACCCAACTTGGGTGCAACAGATA 1538
Query 1743 GTCGACGTGTTTCTATCGAGCCTTCAAGAAATGGAG-T--------AGT---TCCATCAA 1790
|| ||||||||||| |||||||||||| |||||||| | || ||||||||
Sbjct 1539 GTAGACGTGTTTCTTTCGAGCCTTCAAAAAATGGAGCTTCTTCTGCAGGACATCCATCAA 1598
Query 1791 CTTCAGCATATTCAACAAAA-CCTATAGGGCCTCCACCAAGAGTGCCA---TCAGGTAGA 1846
|||| || ||| | || ||| || || || |||||||||||||| ||| |||||||||
Sbjct 1599 CTTCCGCGTATCCTACTAAATCC-ATCGGACCTCCACCAAGAGTTCCACCATCAGGTAGA 1657
Query 1847 CCAGGCCGCATTGTGGAATCATCTGTAACTTATGAAAATGACAGAAACCTTAAAGA 1902
||||| || ||||||||||||||||| ||||||| |||| ||| ||||| |||||
Sbjct 1658 CCAGGTCGTGTTGTGGAATCATCTGTATCTTATGAGAATGGCAGGAACCTCAAAGA 1713
Score = 108 bits (58), Expect = 3e-22
Identities = 89/104 (86%), Gaps = 1/104 (1%)
Strand=Plus/Plus
Query 2113 ACAACACA-AGGTGGGTATTGATGCTAAGCTGCTGCATGCACAATCCCAATATGGTCCTG 2171
|||||||| | ||| ||||||||||||||| |||| |||||||| || | |||||| |
Sbjct 1953 ACAACACACATATGGCCATTGATGCTAAGCTGTTGCAGGCACAATCACAGTTTGGTCCAG 2012
Query 2172 CTGGAGCCGCCGCGGTTGCAGTAGCAGCACACCGGAACATTGGC 2215
| ||||| || ||||||||||||||||||||||||||||| |||
Sbjct 2013 CAGGAGCTGCAGCGGTTGCAGTAGCAGCACACCGGAACATAGGC 2056
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 116917069305
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5