BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg478924 Length=1500 Score E Sequences producing significant alignments: (Bits) Value AT3G14990.1 | Symbols: | Class I glutamine amidotransferase-li... 2198 0.0 AT1G53280.1 | Symbols: | Class I glutamine amidotransferase-li... 1068 0.0 > AT3G14990.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr3:5047400-5049877 FORWARD LENGTH=1545 Length=1545 Score = 2198 bits (1190), Expect = 0.0 Identities = 1431/1540 (93%), Gaps = 45/1540 (3%) Strand=Plus/Plus Query 1 TGAGTCTTTCCCACTATTTTAACCCCATTAGTGACACTCTTTTCTTCTCCACTACACTCC 60 ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 2 TGAGTCTTTCCTACTATTTTAACCCCATTAGTGACACTCCTTTCTTCTCCACTACACTCC 61 Query 61 ATTTCTCTTTCTTC-T---T-G---A-----TCTCTAATCTCCGCAACTATGGCTACATC 107 |||||||||||||| | | | | |||||||||||||||||||||||| ||| Sbjct 62 ATTTCTCTTTCTTCTTGACTCGACCATCGTTTCTCTAATCTCCGCAACTATGGCTTCATT 121 Query 108 TACGAAGACGGTTTTGATCCCTATTGCACACGGTACGGAGCCTTTAGAAGCGGTGGCGAT 167 |||||| |||||||||||||||||||| ||||||||||||||| |||||||||||||||| Sbjct 122 TACGAAAACGGTTTTGATCCCTATTGCGCACGGTACGGAGCCTCTAGAAGCGGTGGCGAT 181 Query 168 GATCACCGTGTTGCGTCGAGGTGGTGCTGACGTGACGGTGGCTTCCGTCGAGACTCAGGT 227 ||| |||||||||||||||||||||||||||||||||||||| || || ||||||||||| Sbjct 182 GATTACCGTGTTGCGTCGAGGTGGTGCTGACGTGACGGTGGCGTCTGTTGAGACTCAGGT 241 Query 228 TGGCGTTGATGCTTGTCATGGCATCAAGATGGTCGCTGATACTCTTCTCTCTGATATTAC 287 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 242 TGGCGTTGATGCTTGTCATGGCATCAAGATGGTCGCTGATACTCTTCTCTCTGATATTAC 301 Query 288 CGACTCTGTTTTCGACCTTATTGTGCTCCCCGGAGGGCTTCCCGGTGGCGAGACTCTTAA 347 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 302 CGACTCTGTTTTCGACCTTATTGTGCTCCCCGGAGGGCTTCCCGGTGGCGAGACTCTTAA 361 Query 348 AAACTGTAAACCTTTAGAGAACATGGTTAAGAAACAAGACTCTGATGGACGACTTAACGC 407 |||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 362 AAACTGTAAATCTTTAGAGAACATGGTCAAGAAACAAGACTCTGATGGCCGACTTAACGC 421 Query 408 AGCTATCTGTTGTGCTCCTGCGTTGGCTCTTGGTACTTGGGGTCTACTAGAAGGCAAAAA 467 |||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| || Sbjct 422 AGCTATATGTTGTGCTCCTGCCTTGGCTCTTGGTACTTGGGGTCTACTAGAAGGCAAGAA 481 Query 468 AGCAACGGGTTACCCTGTTTTTATGGAGAAACTTGCAGCTACTTGTGCCACTGCTGTTGA 527 |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 482 AGCAACGGGTTACCCTGTTTTTATGGAGAAACTTGCGGCTACTTGTGCAACTGCTGTTGA 541 Query 528 GTCAAGAGTGCAAATAGATGGAAGAATAGTGACTAGTCGTGGACCAGGAACCACCATTGA 587 ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 542 GTCAAGAGTGCAAATTGATGGAAGAATAGTGACCAGTCGTGGACCAGGAACCACCATTGA 601 Query 588 ATTCTCCGTCACGCTTATAGAGCAGTTGTTTGGGAAAGAGAAAGCTGATGAAGTCTCTAG 647 ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| || Sbjct 602 ATTCTCCATCACGCTTATAGAGCAGTTGTTTGGGAAAGAAAAAGCTGATGAAGTCTCCAG 661 Query 648 TATCTTGCTGCTTCGTCCCAACCCTGGTGAGGAGTTTACTTTTACTGAGCTTAACCAAAC 707 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 662 TATCTTGCTGCTTCGTCCTAACCCTGGTGAGGAGTTTACTTTTACTGAGCTTAACCAAAC 721 Query 708 GACCTGGTCATTCGAAGATACACCACAGATTCTCGTACCCATTGCAGAGGAGTCAGAGGA 767 | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 722 AAACTGGTCATTTGAAGATACACCACAGATTCTCGTACCCATTGCAGAGGAGTCAGAGGA 781 Query 768 AATTGAAGCCATTGCGCTTGTAGATATCCTGAGACGGGCAAAAGCAAACGTAGTGATTGC 827 ||||||||| || |||||||||||||||||||| |||||||||||||| ||||||||||| Sbjct 782 AATTGAAGCTATAGCGCTTGTAGATATCCTGAGGCGGGCAAAAGCAAATGTAGTGATTGC 841 Query 828 TGCAGTTGGTAACAGTTTGGAAGTTGTAGGATCTCGCAAAGCTAAGCTAGTAGCAGAAGT 887 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 842 TGCAGTTGGTAACAGTTTGGAAGTTGAAGGATCTCGCAAAGCTAAGCTAGTAGCAGAAGT 901 Query 888 GCTTCTTGATGAAGTTGCAGAGAAGTCGTTCGATCTGATTGTGTTACCTGGCGGTCTTAA 947 ||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 902 TCTTCTTGATGAGGTTGCAGAGAAGTCGTTTGATCTGATTGTGTTACCTGGCGGTCTTAA 961 Query 948 CGGTGCTCCAAGATTCGCAAGCTGCGAGAAACTGGTGAATATGTTAAAGAAGCAGGCAGA 1007 |||||||| ||||||||||||||||||||| || || |||||||||| ||| |||||||| Sbjct 962 CGGTGCTCAAAGATTCGCAAGCTGCGAGAAGCTAGTTAATATGTTAAGGAAACAGGCAGA 1021 Query 1008 AGCAAACAAACCATATGGAGGAATCTGCGCATCGCCTGCGTACGTCTTCGAGCCTAATGG 1067 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1022 AGCAAACAAACCATATGGAGGAATCTGCGCATCGCCTGCTTACGTCTTCGAGCCTAATGG 1081 Query 1068 TTTACTCAAGGGTAAGAAGGCTACTACTCACCCAGTGGTGAGCGACAAACTTTCGGACAA 1127 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1082 TTTACTCAAGGGTAAGAAGGCTACTACTCACCCAGTGGTGAGCGACAAACTTTCGGACAA 1141 Query 1128 GAGTCACATTGAGCATAGAGTCGTGGTAGATGGAAATGTCATAACAAGCAGAGCTCCAGG 1187 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1142 GAGTCACATTGAGCACAGAGTCGTGGTAGATGGAAATGTCATAACAAGCAGAGCTCCAGG 1201 Query 1188 GACTGCAATGGAGTTTTCACTTGCGATTGTCGAAAAGTTTTACGGGCGAGAGAAAGCACT 1247 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 1202 GACTGCAATGGAGTTTTCACTTGCCATTGTCGAAAAGTTTTACGGGCGAGAGAAAGCTCT 1261 Query 1248 TCAGCTCGCAAAGGCCACACTTGTGTGATTTCCGAACAATGAAT-TATGAGAGTGACTTG 1306 |||||||| |||||| |||||||||||||||| ||||||||| |||||||||| |||| Sbjct 1262 TCAGCTCGGAAAGGCAACACTTGTGTGATTTCA-AACAATGAAAGTATGAGAGTGGCTTG 1320 Query 1307 AATAAAA-GAAGGCTTTGCCTTTTAGTTATCTCTC---AT-A-TAA---C--A-T--ATG 1352 ||||||| ||||||||||||||||||||||||||| || | ||| | | | ||| Sbjct 1321 AATAAAAAGAAGGCTTTGCCTTTTAGTTATCTCTCTCCATTAGTAATTACTTACTTTATG 1380 Query 1353 A-----G-CATTTGGG-T-G----AGTGGTTGCTGTGAAACTTTATGCCTTTATAAATGA 1400 | | ||| || | | | |||| ||| |||| |||||||||||||||||||||| Sbjct 1381 ATATATGACATATGAGCTTGGCTTAGTGATTGGTGTGTAACTTTATGCCTTTATAAATGA 1440 Query 1401 ATAAACGAGATTTTTCTATGTATGTGGCCGATATTTTCTTTAACCCTCTGCAAGAG-TAA 1459 ||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| || Sbjct 1441 ATAAACGAGATTTTTCTATGTATGTTGCCGATATTTTCTTTAAACCTCTGCAAGAGCTA- 1499 Query 1460 GAGGGTTTTCTTGAGGAAGATATTTTATTTTATGGAGAAA 1499 |||||| | || ||| || | ||| |||||||||||||| Sbjct 1500 GAGGGTGTGCTGGAGAAAAAAATT--ATTTTATGGAGAAA 1537 > AT1G53280.1 | Symbols: | Class I glutamine amidotransferase-like superfamily protein | chr1:19864770-19867389 REVERSE LENGTH=1537 Length=1537 Score = 1068 bits (578), Expect = 0.0 Identities = 1010/1215 (83%), Gaps = 44/1215 (4%) Strand=Plus/Plus Query 79 TCTCTAATCTCCGCAACTATGGCTACATCTACGAAGACGGTTTTGATCCCTATTGCACAC 138 ||||| ||||| ||||||||| || ||||||| |||| ||||||||| ||| |||| || Sbjct 173 TCTCT-ATCTCTGCAACTATGTCTTCATCTACTAAGAAGGTTTTGATTCCTGTTGCTCAT 231 Query 139 GGTACGGAGCC-TTTAGAAGCGGTGGCGATGATC-ACCGTGTTGCGTCGAGGTGGTGCTG 196 ||||||||||| ||| |||||||||| |||||| | ||| | || ||||| || || | Sbjct 232 GGTACGGAGCCGTTT-GAAGCGGTGGTTATGATCGA-TGTGCTACGGCGAGGCGGAGCGG 289 Query 197 ACGTGACGGTGGCTTCCGTCGAGACTCAGGTTGGCGTTGATGCTTGTCATGGCATCAAGA 256 | || |||||||||||||| |||| |||||| |||||||||||||| ||||| ||||| | Sbjct 290 ATGTTACGGTGGCTTCCGTTGAGAATCAGGTCGGCGTTGATGCTTGCCATGGAATCAAAA 349 Query 257 TGGTCGCTGATACTCTTCTCTCTGATATTACCGACTCTGTTTTCGACCTTATTGTGCTCC 316 |||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||| Sbjct 350 TGGTCGCTGATACTCTTCTCTCTGATATCACCGACTCGGTTTTCGACCTTATTATGCTCC 409 Query 317 CCGGAGGGCTTCCCGGTGGCGAGACTCTTAAAAACTGTAAACCTTTAGAGAACATGGTTA 376 | ||||| ||||| ||||| ||||||||||| || ||||||||||||||||| ||||| | Sbjct 410 CTGGAGGACTTCCTGGTGGTGAGACTCTTAAGAATTGTAAACCTTTAGAGAAGATGGTGA 469 Query 377 AGAAACAAGACTCTGATGGACGACTTAACGCAGCTATCTGTTGTGCTCCTGCGTTGGC-T 435 |||| |||||| ||||||||||||||||||| |||||||||||||| || |||||||| | Sbjct 470 AGAAGCAAGACACTGATGGACGACTTAACGCTGCTATCTGTTGTGCGCCGGCGTTGGCGT 529 Query 436 CTTGGTACTTGGGGTCTACTAGAAGGCAAAAAAGCAACGGGTTACCCTGTTTTTATGGAG 495 ||||||||||||| |||||||| || |||||||| || ||||||| |||||||||||| Sbjct 530 -TTGGTACTTGGGGACTACTAGAGGGTAAAAAAGCTACATGTTACCCGGTTTTTATGGAG 588 Query 496 AAACTTGCAGCTACTTGTGCCACTGCTGTTGAGTCAAGAGTGCAAATAGATGG-AAGAAT 554 ||||| || ||| | |||| || |||||||||||||||||| |||| ||||| |||| | Sbjct 589 AAACTAGCGGCT--T-GTGCGACAGCTGTTGAGTCAAGAGTGGAAATTGATGGGAAGA-T 644 Query 555 AGTGACTAGTCGTGGACCAGGAACCACCATTGAATTCTCCGTCACGCTTATAGAGCAG-T 613 |||||| ||| | || || ||||| ||||| |||||||| ||||||||| | ||||| | Sbjct 645 AGTGACCAGTAGAGGGCCTGGAACTACCATGGAATTCTCTGTCACGCTTGTGGAGCAACT 704 Query 614 TGTTTGGGAAAGAGAAAGCTGATGAAGTCTCTAGTATCTTGCTGCTTCGTCCCAACCCTG 673 | || |||||||||||||||| |||||||||| | |||| || | ||||||||||||| Sbjct 705 TCTT-GGGAAAGAGAAAGCTGTTGAAGTCTCTGGCCCCTTGGTGATGCGTCCCAACCCTG 763 Query 674 GTGAGGAGTTTACTTTTACTGAGCTTAACCAAA-CGACCTGGTCATTCGAAGATACACCA 732 |||| |||| |||| ||||||||||||||||| | | |||||||||||| | ||| ||| Sbjct 764 GTGATGAGTATACTATTACTGAGCTTAACCAAGTC-AGCTGGTCATTCGAGGGTACCCCA 822 Query 733 CAGATTCTCGTACCCATTGCAGA-GGAGTCAGAGGAAATTGAAGCCATTGCGCTTGTAGA 791 |||||||| |||||||||||||| || || |||||||| ||||| |||| | | || Sbjct 823 CAGATTCTTGTACCCATTGCAGATGGC-TCGGAGGAAATGGAAGCTGTTGCTATCATTGA 881 Query 792 TATCCTGA-GACGGGCAAAAGCAAACGTAGT-GATTGCTGCAG-TTGGTAACAGTTTGGA 848 | |||||| | |||||||||||||| || || | | ||||| | |||||||||||||||| Sbjct 882 TGTCCTGAAG-CGGGCAAAAGCAAATGTTGTCG-TAGCTGC-GCTTGGTAACAGTTTGGA 938 Query 849 AGTTGTAGGATCTCGCAAAG-CTAAGCTAGTAGCAGAAGTGCTTCTTGATGAAGTTGCAG 907 ||| |||| |||||| |||| | ||||| || ||||| |||||||| || || | || | Sbjct 939 AGTGGTAGCATCTCGGAAAGTC-AAGCTGGTGGCAGATGTGCTTCTCGACGAGGCTGAAA 997 Query 908 AGAAGTCGTTCGATCTGATTGTGTTACCTGGCGGTCTTAACGGTGCTCCAAG-ATTCGCA 966 |||| |||| ||||||||||||||| ||||| ||||| ||||||| ||| ||| ||| Sbjct 998 AGAATTCGTACGATCTGATTGTGTTGCCTGGTGGTCTCGGCGGTGCTG-AAGCATTTGCA 1056 Query 967 AGCTGCG-AGAAACTGGTGAATATGTTAAAGAAGCAGGCAGAAGCAAACAAACCATATGG 1025 || | || |||| || ||||||||||||||||||||||| ||| |||||||||||||||| Sbjct 1057 AGTT-CGGAGAAGCTAGTGAATATGTTAAAGAAGCAGGCGGAATCAAACAAACCATATGG 1115 Query 1026 AGGAATCTGCGCATCGCCTGCGTAC-G-TCTTCGAGCCTA-ATGGTTTACTCAAGGGTAA 1082 || ||| || || || ||||| | | | | || ||||| | ||||||||||||||||||| Sbjct 1116 AGCAATTTGTGCCTCTCCTGC-T-CTGGTGTTTGAGCC-ACATGGTTTACTCAAGGGTAA 1172 Query 1083 GAAGGCTACTA-C-TCACCCAGTGGTGAGC-GACAAACTTTCGGACAAGAGTCACATTGA 1139 |||||| || | | | || || || || | |||||| ||||| |||||||||| || Sbjct 1173 GAAGGCAAC-AGCGTTTCC-AGCAATGTGCAG-CAAACTGACGGACCAGAGTCACATCGA 1229 Query 1140 GCATAGAGTCGTGGTAGATGGAAATGTCATAACAAGCAGAGCTCCAGGGAC-TGCAATGG 1198 |||| ||||| |||| || || ||| ||||||| ||||| | |||||| || | || ||| Sbjct 1230 GCATCGAGTCTTGGTGGACGGCAATCTCATAACGAGCAGGGGTCCAGGAACCT-CATTGG 1288 Query 1199 AGTTTTCACTTGCGATTGTCGAAAAGTTTTACGGGCGAGAGAAAGCACTTCAGCTCGCAA 1258 ||||| ||||||| ||||| || |||||||||||||| ||||||| |||||||||| ||| Sbjct 1289 AGTTTGCACTTGCAATTGTAGAGAAGTTTTACGGGCGCGAGAAAGGACTTCAGCTCTCAA 1348 Query 1259 AGGCCACACTTGTGT 1273 |||| |||||||||| Sbjct 1349 AGGCAACACTTGTGT 1363 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 73995603330 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5