BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479088 Length=413 Score E Sequences producing significant alignments: (Bits) Value AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:5... 616 7e-176 > AT3G16360.2 | Symbols: AHP4 | HPT phosphotransmitter 4 | chr3:5554258-5555603 FORWARD LENGTH=616 Length=616 Score = 616 bits (333), Expect = 7e-176 Identities = 343/348 (99%), Gaps = 0/348 (0%) Strand=Plus/Plus Query 30 CAGGGATATCTCGACGAACAATTCATGGAGCTAGAAGAGCTCCAAGATGATGCAAACCCT 89 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 136 CAGGGATATCTCGACGAACAATTCATGGAGTTAGAAGAGCTCCAAGATGATGCAAACCCT 195 Query 90 AATTTTGTTGAAGAAGTTTCCGCATTGTACTTCAAAGATTCAGCTCGATTAATCAATAAC 149 |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| Sbjct 196 AATTTTGTTGAAGAAGTTTCCGCATTATACTTCAAAGATTCAGCTCGGTTAATCAATAAC 255 Query 150 ATTGACCAAGCTTTGGAAAGAGGATCATTTGATTTCAATCGGCTGGATAGTTACATGCAT 209 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 256 ATTGACCAAGCTTTGGAAAGAGGATCATTTGATTTCAATCGGCTGGATAGTTACATGCAT 315 Query 210 CAGTTTAAGGGAAGCAGCACGAGCATTGGGGCAAGTAAAGTGAAAGCTGAATGCACTACG 269 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 316 CAGTTTAAGGGAAGCAGCACGAGCATTGGGGCAAGTAAAGTGAAAGCTGAATGCACTACG 375 Query 270 TTTAGGGAATACTGCAGAGCTGGAAATGCTGAAGGATGCTTGAGGACTTTCCAGCAACTG 329 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 376 TTTAGGGAATACTGCAGAGCTGGAAATGCGGAAGGATGCTTGAGGACTTTCCAGCAACTG 435 Query 330 AAGAAAGAACACTCAACGTTGCGAAAGAAGCTTGAACATTATTTCCAG 377 ||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 436 AAGAAAGAACACTCAACGTTGAGAAAGAAGCTTGAACATTATTTCCAG 483 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19554154361 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5