BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479097
Length=1085
Score E
Sequences producing significant alignments: (Bits) Value
AT3G16420.1 | Symbols: PBP1, JAL30 | PYK10-binding protein 1 | ... 1522 0.0
AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3... 1262 0.0
AT3G16450.1 | Symbols: | Mannose-binding lectin superfamily pr... 507 1e-142
AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase... 424 1e-117
> AT3G16420.1 | Symbols: PBP1, JAL30 | PYK10-binding protein 1
| chr3:5579386-5580953 FORWARD LENGTH=1274
Length=1274
Score = 1522 bits (824), Expect = 0.0
Identities = 1006/1093 (92%), Gaps = 16/1093 (1%)
Strand=Plus/Plus
Query 1 AATATAAATACACATACAATTCACTTAAATTGATCATAGCACCGATCACAATCTACTCTC 60
|||||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 1 AATATAAATAAACATACAATTCACTTTAATTGATCATAGCACCGATAACAATCTACTCTC 60
Query 61 TTTAGAAGAAATTCGTAAGT-TTGGTCAAGAAGCAAAAGATGGCCCAAAAGGTGGAAGCA 119
|||| ||||||||||||||| | |||||||||| ||||||||||||||||||||||||
Sbjct 61 TTTAAAAGAAATTCGTAAGTACT-ATCAAGAAGCAGAAGATGGCCCAAAAGGTGGAAGCA 119
Query 120 CAAGGAGGGAAAGGAGGCAACCAATGGGACGATGGATCCG-TACATGACGCTGTGACCAA 178
|||||||||||||||| ||||| |||||||||||||| || ||||||||| ||||||||
Sbjct 120 CAAGGAGGGAAAGGAGCCAACCTATGGGACGATGGAT-CGACACATGACGCCGTGACCAA 178
Query 179 GATTCAGGTCGGAGCAGG--TGGACTCGGCATTCAATACGTTCAGTTTGATTATGTCAAG 236
||||||| ||| |||||| | || ||| |||||||| |||||||||||||||||||||
Sbjct 179 GATTCAGCTCGCAGCAGGCATAGA--CGGAATTCAATATGTTCAGTTTGATTATGTCAAG 236
Query 237 AACGGACAAACCGAACAAGCTCCTCTTCGCGGTATCAAAGGCCGTGTTATGCCAGCTGAT 296
||||||||| ||||||||||||||||||| |||| ||||||||||||| | |||||||||
Sbjct 237 AACGGACAACCCGAACAAGCTCCTCTTCGTGGTACCAAAGGCCGTGTTCTCCCAGCTGAT 296
Query 297 CCGTTTGTGATTAACCATCCAGAGGAACATCTAGTTTCTGTAGAAGGTTGGTATAGCCCC 356
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 297 CCGTTTGTGATTAACCATCCAGACGAACATCTAGTTTCTGTAGAAGGTTGGTATAGCCCT 356
Query 357 GAAGGTGTCATTCAAGGGCTTAAGTTCATCTCCAACAAGAAGACTTCTGATGTAATTGGA 416
|||||| |||||||||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 357 GAAGGTATCATTCAAGGAATTAAGTTCATCTCCAACAAGAAGACTTCTGATGTCATTGGA 416
Query 417 TACGAAGATGGTACTCCA-TTCACTCTCA-AAGTTCAAGACAAGAAGATCATTGGCTTTC 474
| ||| || |||||| || |||||||| | ||||| ||||||||||||||||||||||||
Sbjct 417 TCCGATGAGGGTACT-CACTTCACTCT-ACAAGTTAAAGACAAGAAGATCATTGGCTTTC 474
Query 475 ATGGGTCTGCCGGAGACAATCTTAATTCTCTTGGGGCTTACTTTGCTCCGTCGACTAGTA 534
||||||||||||| | ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 475 ATGGGTCTGCCGGGGGCAATCTTAATTCTCTTGGGGCTTACTTTGCTCCGTTGACTACTA 534
Query 535 CAACTCCGTTGACTCCTGCCAAGCAGCTACCCGCACTTGGTAGTGATGATGGAGCTGCT- 593
||||||||||||||||||||||||||||| | ||| ||||||||||||| ||| ||| |
Sbjct 535 CAACTCCGTTGACTCCTGCCAAGCAGCTAACGGCATTTGGTAGTGATGACGGAACTG-TA 593
Query 594 TGGGATGATGGTTCTTACGTTGGTGTTAAGAAGGTGTACGTAGGACAAGCCCAAGATGGT 653
|||||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 594 TGGGATGATGGTGCTTACGTTGGGGTTAAGAAGGTGTACGTTGGACAAGCCCAAGATGGA 653
Query 654 ATCTCAGCCGTTAAGTTTGTGTACGACAAAAGTCCTGAGGAGGTCGTAGGAGAAGAACAT 713
|||||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 654 ATCTCAGCTGTTAAGTTTGTGTACGACAAAAGCCCTGAGGAGGTCACAGGAGAAGAACAT 713
Query 714 GGAAAGAGTACTCTACTCGGATTCGAAGAGTTAGTACTTGACTATCCAAGTGAATACATC 773
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 714 GGAAAGAGTACTCTACTCGGATTCGAAGAGTTCGTACTTGACTATCCAAGTGAATACATC 773
Query 774 ACCGCAGTCGAAGGCACCTACGATAAAATCTTTGGGAGTGATGGCTCAGTCATAACTATG 833
||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 774 ACCGCAGTCGATGGCACTTATGATAAAATCTTTGGGAGTGATGGCTCAGTCATAACTATG 833
Query 834 CTTAGGTTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGACTTGAAGCTGGCACAGCC 893
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 834 CTCAGGTTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGACTTGAAGCTGGCACAGTC 893
Query 894 TTCGAACTCAAAGAGGAGGGCCACAAAATCGTTGGCTTCCATGGAAGAGCC-AGTGATCT 952
||||||||||||||||| |||||||| |||||||| ||||||||||||||| | || |||
Sbjct 894 TTCGAACTCAAAGAGGAAGGCCACAAGATCGTTGGTTTCCATGGAAGAGCCGA-TGTTCT 952
Query 953 GCTTCACAAATTTGGAGTCCATGTCCGTCCCGTCTCCAACTGATAATGGAGATCTTTATC 1012
||| |||||| ||||||||||||| ||||| | |||||||||| |||||| ||||||||
Sbjct 953 GCTCCACAAAATTGGAGTCCATGTTCGTCCTTTATCCAACTGATGATGGAGCTCTTTATC 1012
Query 1013 TTTGAATCTATGCATCTAATAAGTTATCAAATCTATCTTCTAAATTTGTCATTTGAGGTC 1072
|||| || |||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct 1013 CTTGATTCCATGCATCTAATAAGTTATCAAATCTATCTTCTAAATTTCTCATATGAGGTC 1072
Query 1073 TCTTCATGCCTCT 1085
|||||||||||||
Sbjct 1073 TCTTCATGCCTCT 1085
> AT3G16430.1 | Symbols: JAL31 | jacalin-related lectin 31 | chr3:5581663-5583187
FORWARD LENGTH=1205
Length=1205
Score = 1262 bits (683), Expect = 0.0
Identities = 933/1051 (89%), Gaps = 27/1051 (3%)
Strand=Plus/Plus
Query 43 CGATCACAATCTACTCTCTTTAGAAG-AAAT-TCGTAAGTTTGGTCAAG-AAGCAAAAGA 99
|||||||||||||||| |||| |||| || | | ||||| ||| || || |||||||| |
Sbjct 29 CGATCACAATCTACTCACTTTTGAAGTAACTATAGTAAGATTGATC-AGCAAGCAAAATA 87
Query 100 TGGCCCAAAAGGTGGAAGCACAAGGAGGGAAAGGAGGCAACCAATGGGACGATGGATCCG 159
|||| |||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 88 TGGCTCAAAAGGTTGAAGCAAAAGGAGGGAAAGGAGGCAACCAATGGGACGATGGATCCG 147
Query 160 TA-CATGACGCTGTGACCAAGATTCAGGTCGGAGCAGGTGGACTCGGCATTCAATACGTT 218
| |||||||| ||||||||||||||||| | || ||| ||| | || ||||||||| ||
Sbjct 148 -ATCATGACGCCGTGACCAAGATTCAGGTTGCAGTAGGCGGAATGGGAATTCAATACATT 206
Query 219 CAGTTTGATTATGTCAAGAACGGACAAACCGAACAAGCTCCTCTTCGCGGTATCAAAGGC 278
||||| ||||| |||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct 207 CAGTTCGATTACGTCAAGAACGGACAAACCGAACAAACTCCTCTTCGTGGTATCAAAGGC 266
Query 279 CGTGTTATGCCAGCTGATCCGTTTGTGATTAACCATCCAGAGGAACATCTAGTTTCTGTA 338
|| || ||| ||||||||||||||||||||||||| ||||| |||||||||||| |
Sbjct 267 AGTACCATTCCAACTGATCCGTTTGTGATTAACCATCCTGAGGAGCATCTAGTTTCTATT 326
Query 339 GAAGGTTGGTATAGCCCCGAAGGTGTCATTCAAGGGCTTAAGTTCATCTCCAACAAGAAG 398
||| |||||||| || || ||| | ||||||||||||| |||||| |||||||| |||
Sbjct 327 GAAATTTGGTATAAACCTGATGGTCTTATTCAAGGGCTTAGGTTCATATCCAACAAAAAG 386
Query 399 ACTTCT-GATGTAATTGGATACGA-AGATGGTACTCCATTCA-CTCTCAAAGTTCAAGAC 455
|||||| | | | ||||||||||| | ||||||| | ||| |||| |||||||||||
Sbjct 387 ACTTCTCG-TTTCATTGGATACGATCG-TGGTACTAGA-TCATTTCTCCAAGTTCAAGAC 443
Query 456 AAGAAGATCATTGGCTTTCATGGGTCTGCCGGAGACAATCTTAATTCTCTTGGGGCTTAC 515
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 444 AAGAAGATCATTGGCTTTCATGGGTCTGCCGGAGACAATCTTAATTCTCTTGGAGCTTAC 503
Query 516 TTTGCTCCGTCGACTAGTACAACTCCGTTGACTCCTGCCAAGCAGCTACCCGCACTTGGT 575
|||||||||| ||||| | | || |||||||||||||||| |||||| |||||||||
Sbjct 504 TTTGCTCCGTTGACTA-T----C-CCATTGACTCCTGCCAAGCCGCTACCGGCACTTGGT 557
Query 576 AGTGATGATGGAGCTGCTTGGGATGATGGTTCTTACGTTGGTGTTAAGAAGGTGTACGTA 635
|||||||||||| | || |||||||||||| |||||||||| ||||||||||||||||||
Sbjct 558 AGTGATGATGGAACAGCATGGGATGATGGTGCTTACGTTGGGGTTAAGAAGGTGTACGTA 617
Query 636 GGACAAGCCCAAGATGGTATCTCAGCCGTTAAGTTTGTGTACGACAAAAGTCCTGAGGAG 695
|||||||||||||||||||| || || ||||||||||| ||||||||||| |||||||||
Sbjct 618 GGACAAGCCCAAGATGGTATATCGGCTGTTAAGTTTGTATACGACAAAAGCCCTGAGGAG 677
Query 696 GTCGTAGGAGAAGAACATGGAAAGAGTACTCTACTCGGATTCGAAGAGTTAGTACTTGAC 755
||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 678 GTCACAGGAGAAGAACATGGAAAGAGTACTCTACTCGGATTCGAAGAGTTCGTACTTGAC 737
Query 756 TATCCAAGTGAATACATCACCGCAGTCGAAGGCACCTACGATAAAATCTTTGGGAGTGAT 815
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 738 TATCCAAGTGAATACATCATCGCAGTCGAAGGCACCTACGATAAAATCTTTGGGAGTGAT 797
Query 816 GGCTCAGTCATAACTATGCTTAGGTTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGA 875
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 798 GGCTCAGTCATAACTATGCTTAGGTTCAAGACTAATAAGCAAACGTCCCCTCCCTTTGGA 857
Query 876 CTTGAAGCTGGCACAGCCTTCGAACTCAAAGAGGAGGGCCACAAAATCGTTGGCTTCCAT 935
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 858 CTTGAAGCTGGCACTGCCTTCGAACTCAAAGAGGAAGGCCACAAAATCGTTGGCTTCCAT 917
Query 936 GGAAGAGCC-AGTGATCTGCTTCACAAATTTGGAGTCCATGTCCGTCCCGTCTCCAACTG 994
||||||||| | || | |||| |||||| ||||||| |||||||||||||| ||||||||
Sbjct 918 GGAAGAGCCGA-TGCTTTGCTCCACAAAATTGGAGTTCATGTCCGTCCCGTTTCCAACTG 976
Query 995 ATAATGGAGATCTTTATCTTTGAATCTATGCATCTAATAAGTTATCAAATCTATCTTCTA 1054
| ||| |||||||||||||||| || ||| | | | ||||| | |||||| ||
Sbjct 977 ACCATGAAGATCTTTATCTTTGATTCCATGGAGATC-T---TTATCT--T-TATCTTATA 1029
Query 1055 AATTTGTCATTTGAGGTCTCTTCATGCCTCT 1085
|||| ||||||||||||||||||||||||||
Sbjct 1030 AATTGGTCATTTGAGGTCTCTTCATGCCTCT 1060
> AT3G16450.1 | Symbols: | Mannose-binding lectin superfamily
protein | chr3:5588486-5590055 FORWARD LENGTH=1273
Length=1273
Score = 507 bits (274), Expect = 1e-142
Identities = 410/473 (87%), Gaps = 20/473 (4%)
Strand=Plus/Plus
Query 534 ACAACTCCGT-TGACTCCTGCCAAGCAGCTACCCGCACTTGGTAGTGATGATGGAGCTGC 592
|||||||| | ||||||||||||| | ||| | ||| ||||| ||||||| ||| ||||
Sbjct 549 ACAACTCC-TGTGACTCCTGCCAAAAAACTATCTGCAATTGGTGGTGATGAAGGAACTGC 607
Query 593 TTGGGATGATGGTTCTTACGTTGGTGTTAAGAAGGTGTACGTAGGACAAGCCCAAGATGG 652
||||| || ||| | |||| |||||| |||||||||||||||||||||| |||||||||
Sbjct 608 ATGGGACGACGGTGCGTACGATGGTGTCAAGAAGGTGTACGTAGGACAAGGCCAAGATGG 667
Query 653 TATCTCAGCCGTTAAGTTTGTGTACGACAAAAGTC-CTGAGGAGGTCGTAGGAGAAGAAC 711
|| |||||||||||||||| |||| || |||| | | ||| | ||||||||| ||||
Sbjct 668 GATATCAGCCGTTAAGTTTGAGTACAAC-AAAGGCGCGGAGAATATCGTAGGAGGTGAAC 726
Query 712 ATGGAAAGAGTACTCTACTCGGATTCGAAGAG-TT-AGTACTTGACTATCCAAGTGAATA 769
|||||||| |||| ||||||||||||| ||| || || | |||||||||||||||||||
Sbjct 727 ATGGAAAGCCTACTTTACTCGGATTCGAGGAGTTTGAG-A-TTGACTATCCAAGTGAATA 784
Query 770 CATCACCGCAGTCGAAGGCACCTACGATAAAATCTTTGGGAGTGATGG-CTCAGTCATAA 828
|||||||||||| ||||||||||| ||||||||||||||||||||||| || | ||||||
Sbjct 785 CATCACCGCAGTTGAAGGCACCTATGATAAAATCTTTGGGAGTGATGGCCT-AATCATAA 843
Query 829 CTATGCTTAGGTTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGACTTGAAGCTGGCA 888
||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 844 CTATGCTTAGGTTCAAGACTAATAAACAAACGTCTGCTCCCTTTGGACTTGAAGCTGGCA 903
Query 889 CAGCCTTCGAACTCAAAGAGGA-GGGCCACAAAATCGTTGGCTTCCATGGAAGAGCCAGT 947
||||||||||||| |||||||| |||| |||| ||||||||||||||||||| |||||||
Sbjct 904 CAGCCTTCGAACTTAAAGAGGAAGGGC-ACAAGATCGTTGGCTTCCATGGAAAAGCCAGT 962
Query 948 GA-TCTGCTTCA-CAAATTTGGAGTCCATGTCC-GTCC-CGTCTCCAACTGAT 996
|| | ||||||| || ||||||||||||||| | || | || |||||||||
Sbjct 963 GAGT-TGCTTCATCAG-TTTGGAGTCCATGTCATG-CCAC-TCACCAACTGAT 1011
> AT3G16440.1 | Symbols: ATMLP-300B, MEE36, MLP-300B | myrosinase-binding
protein-like protein-300B | chr3:5585944-5587750
FORWARD LENGTH=1179
Length=1179
Score = 424 bits (229), Expect = 1e-117
Identities = 389/467 (83%), Gaps = 8/467 (2%)
Strand=Plus/Plus
Query 534 ACAACTCCGTTGACTCCTGCCAAGCAGCTACCCGCACTTGGTAGTGATGATGGAGCTGCT 593
|||||||| ||||||||||||||| | ||||| || ||||| |||| || ||| ||||
Sbjct 509 ACAACTCCTTTGACTCCTGCCAAGAAACTACCGGCTGTTGGTGGTGACGAAGGAACTGCC 568
Query 594 TGGGATGATGGTTCTTACGTTGGTGTTAAGAAGGTGTACGTAGGACAAGCCCAAGATGGT 653
|||||||||||| ||| || |||||||||||| ||||| |||| |||||||||||||||
Sbjct 569 TGGGATGATGGTGCTTTCGATGGTGTTAAGAAAGTGTATATAGGGCAAGCCCAAGATGGT 628
Query 654 ATCTCAGCCGTTAAGTTTGTGTACGACAAAAGTC-CTGAGGAGGTCGTAGGAGAAGAACA 712
|| || ||||| |||||||||||||| || | | | ||||| | |||||||| |||||
Sbjct 629 ATATCGGCCGTGAAGTTTGTGTACGA-TAAGGGCGCCGAGGATATTGTAGGAGATGAACA 687
Query 713 TGGAAA-GAGTACTCTACTCGGATTCGAAGAGTTAGTACTTGACTATCCAAGTGAATACA 771
|||||| || ||||||||||||||| |||||||| ||||||||||||||||||||| |
Sbjct 688 TGGAAATGA-TACTCTACTCGGATTTGAAGAGTTCCAACTTGACTATCCAAGTGAATATA 746
Query 772 TCACCGCAGTCGAAGGCACCTACGATAAAATCTTTGGGAGTGATGGCT-CAGTCATAACT 830
| || ||||| |||||||| || || ||||| ||||| ||| | || |||||||| |
Sbjct 747 TTACTGCAGTTGAAGGCACATATGACAAAATATTTGGTTTTGA-GACTGAAGTCATAAAT 805
Query 831 ATGCTTAGGTTCAAGACTAATAAGCAAACGTCTCCTCCCTTTGGACTTGAAGCTGGCACA 890
|||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 806 ATGCTTAGGTTCAAAACTAATAAGAAAACGTCTCCTCCCTTTGGAATTGAAGCTGGCACA 865
Query 891 GCCTTCGAACTCAAAGAGGAGGGCCACAAAATCGTTGGCTTCCATGGAAGAGCCAGTGAT 950
||||||||||||||||| || || ||| ||||| || || ||||||| || ||||
Sbjct 866 GCCTTCGAACTCAAAGAAGAAGGTTGCAAGATCGTCGGGTTTCATGGAAAAGTAAGTGCG 925
Query 951 CTGCTTCA-CAAATTTGGAGTCCATGTCCGTCCCGTCTCCAACTGAT 996
||||||| || |||||||||||| ||| ||| ||| |||||||||
Sbjct 926 GTGCTTCATCAG-TTTGGAGTCCATATCCTTCCTGTCACCAACTGAT 971
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 53162377155
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5