BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479227 Length=1795 Score E Sequences producing significant alignments: (Bits) Value AT3G17510.1 | Symbols: CIPK1, SnRK3.16 | CBL-interacting protei... 2523 0.0 AT1G48260.1 | Symbols: CIPK17, SnRK3.21 | CBL-interacting prote... 881 0.0 > AT3G17510.1 | Symbols: CIPK1, SnRK3.16 | CBL-interacting protein kinase 1 | chr3:5988991-5992912 REVERSE LENGTH=1938 Length=1938 Score = 2523 bits (1366), Expect = 0.0 Identities = 1647/1770 (93%), Gaps = 70/1770 (4%) Strand=Plus/Plus Query 1 AGAGGAAGCAAAGAGAAGTAGCGTCCTCTCTTCAATTTCAACCGGCActttcttctcttc 60 ||||||| ||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 4 AGAGGAAACAAAGAGAAGTAGCGTCCTCTCTTCAATTTCAACCGGCA-------CT-TTC 55 Query 61 ttcttcttcttcttcttcttcccaatcttcttcgtctcttTACCTACACC------TATA 114 ||| |||||||||||||||||||||||||| ||||||||||||||||||| |||| Sbjct 56 TTC-TCTTCTTCTTCTTCTTCCCAATCTTCCTCGTCTCTTTACCTACACCTATATATATA 114 Query 115 TATATA-ATATCTCTCCTTCCCTCACACACAAACCTGCACAGCTGCAATAATCTACTT-C 172 |||||| |||| ||||||||||||||||||| |||||||||||| ||||||||||||| | Sbjct 115 TATATATATATATCTCCTTCCCTCACACACATACCTGCACAGCTACAATAATCTACTTCC 174 Query 173 CC-CTTT---T-------TT-A-A-CAA-CGAATCGGAAGATTCAAGCGAGAAATCGATT 217 || |||| | || | | || | ||||||||||||||||||||||||||||| Sbjct 175 CCTCTTTCAATAACGGAATTAATAGTAATCTAATCGGAAGATTCAAGCGAGAAATCGATT 234 Query 218 TGGTTGTCTGA-AATT-G--G-----T-----GA--T------T-GATTGGATGGTGAAA 254 |||||||||| |||| | | | || | | ||||||||||||| | Sbjct 235 TGGTTGTCTGTTAATTTGTTGGGAAATAAATTGAAATAGGAGATTGATTGGATGGTGAGA 294 Query 255 AGGCAAGAGGAG-A-A-GAAGGTGGAGAAGGGAATGCGTCTGGGTAAATACGAGCTTGGT 311 |||||||||||| | | ||||| ||||||||||||||||||||| ||||||||||| || Sbjct 295 AGGCAAGAGGAGGAGAAGAAGGCGGAGAAGGGAATGCGTCTGGGGAAATACGAGCTAGGG 354 Query 312 AGGACGCTCGGCGAGGGTAATTTCGGTAAAGTTAAATTCGCTAGAGATACCGTCTCCGGT 371 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 355 AGGACGCTCGGCGAGGGTAATTTCGGTAAAGTTAAATTCGCTAAAGATACCGTCTCCGGT 414 Query 372 CAATCCGTCGCTGTTAAAATTATCGACAAGTCTCGTATCGCCGATCTCAACTTCTCCTTA 431 || ||| |||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 415 CATTCCTTCGCCGTTAAAATCATCGACAAGTCTCGTATCGCCGATCTCAACTTCTCCTTA 474 Query 432 CAGGTTTGCATAAAAAGAGAGATCCGGACTCTGAAAATGTTGAAGCATCCCCACATTGTT 491 ||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 475 CAG------ATAAAAAGAGAGATCCGGACTCTGAAAATGTTGAAACATCCCCACATTGTT 528 Query 492 AGATTACATGAGGTATTGGCTAGCAAAACGAAAATTAATATGGTAATGGAACTTGTTACC 551 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 529 AGATTACATGAGGTCTTGGCTAGCAAAACGAAAATTAATATGGTAATGGAACTTGTTACC 588 Query 552 GGAGGAGAATTGTTCGACAGAATTGTTTCCAACGGAAAATTAACAGAAACTGATGGAAGA 611 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 589 GGAGGAGAATTGTTCGACAGAATTGTTTCCAACGGAAAATTAACAGAAACTGATGGAAGA 648 Query 612 AAAATGTTTCAGCAGCTGATTGATGGAATCAGCTACTGTCACAGCAAAGGTGTTTTCCAC 671 ||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||| Sbjct 649 AAAATGTTTCAGCAGCTTATCGATGGAATCAGCTACTGTCATAGCAAAGGTGTTTTCCAC 708 Query 672 CGGGATCTCAAGCTAGAGAATGTTCTTCTTGATGCAAAGGGACATATAAAGATCACTGAT 731 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 709 AGGGATCTCAAGCTAGAGAATGTTCTTCTTGATGCAAAGGGACATATAAAGATCACTGAT 768 Query 732 TTTGGCCTCAGTGCCCTGCCTCAGCATTTTAGGGATGACGGATTGTTGCATACAACCTGT 791 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 769 TTTGGCCTCAGTGCTCTGCCTCAGCATTTTAGGGATGACGGATTGTTGCATACAACCTGT 828 Query 792 GGAAGTCCTAATTACGTTGCGCCTGAGGTTTTAGCCAACAGAGGTTACGATGGTGCAGCG 851 ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct 829 GGAAGTCCTAATTACGTTGCGCCTGAGGTTTTAGCTAACAGAGGCTACGATGGTGCAGCA 888 Query 852 TCAGATATATGGTCGTGTGGTGTAATCTTGTATGTGATTCTAACCGGATGTCTTCCTTTT 911 ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 889 TCAGACATATGGTCCTGTGGTGTAATCTTGTATGTGATTCTAACCGGATGTCTTCCTTTC 948 Query 912 GACGATAGAAACCTTGTAGTTCTTTACCAGAAGATATGCAAAGGAGACCCACCAATACCA 971 ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||||||| Sbjct 949 GACGACAGAAACCTTGCAGTTCTTTACCAGAAGATATGTAAAGGAGACCCACCAATACCA 1008 Query 972 AGATGGTTATCACCAGGTGCAAGAACCATGATTAAGAGAATGCTCGATCCAAATCCAGTC 1031 ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1009 AGATGGTTATCCCCGGGTGCAAGAACCATGATTAAGAGAATGCTTGATCCAAATCCAGTC 1068 Query 1032 ACCAGGATCACAGTCGTGGGTATTAAAGCCAGCGAGTGGTTCAAACACGAGTATATTCCT 1091 || ||||||||||| ||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 1069 ACGAGGATCACAGTTGTGGGTATTAAAGCCAGCGAGTGGTTCAAACTTGAGTACATTCCT 1128 Query 1092 TCAATTCCCGATGATGATGACGAAGAAGAAGTTGACACAGACGATGATGCTTTCTCAATC 1151 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1129 TCAATTCCCGATGATGATGACGAAGAAGAAGTTGACACAGACGATGATGCTTTCTCAATC 1188 Query 1152 CAAGAACTCGGATCAGAAGAAGGGAAGGGCAGTGATTCACCAACGATCATCAATGCGTTT 1211 ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 1189 CAAGAACTCGGATCAGAAGAAGGGAAGGGCAGTGATTCACCGACCATCATCAATGCGTTT 1248 Query 1212 CAGTTAATCGGAATGTCTTCCTTTCTTGACCTGTCCGGTTTCTTTGAACAAGAGAATGTA 1271 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1249 CAGTTAATCGGAATGTCTTCCTTTCTTGACCTGTCCGGTTTCTTTGAACAAGAGAATGTA 1308 Query 1272 TCAGAGAGGAGAATAAGATTCACTTCAAATAGCTCCGCAAAAGATTTACTCGAGAAAATC 1331 ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct 1309 TCAGAGAGGAGAATAAGATTCACTTCAAATAGCTCAGCAAAAGATTTACTGGAGAAAATC 1368 Query 1332 GAAACAGCCGTTACAGAGATGGGATTCAGTGTACaaaagaaacatgcgaagttaaaagta 1391 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||| Sbjct 1369 GAAACAGCCGTTACAGAAATGGGATTCAGTGTACAAAAGAAACATGCCAAGTTAAGAGTA 1428 Query 1392 aaacaagaagaaagaaaccagaaagGTCAAGTTGGTTTATCAGTAACAGCTGAGGTTTTC 1451 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1429 AAACAAGAAGAAAGAAACCAGAAAGGTCAAGTTGGTTTATCAGTAACAGCTGAGGTTTTC 1488 Query 1452 GAGATAAAACCGTCACTGAACGTGGTTGAGCTAAGAAAATCTTATGGCGATTCATGTTTA 1511 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1489 GAGATAAAGCCGTCACTGAACGTGGTTGAGCTAAGAAAATCTTATGGCGATTCATGTTTA 1548 Query 1512 TATAGACAGTTGTACGAGAGACTATTAAAAGACGTGGGCACATCCTCGCCGGAGCAAGAG 1571 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1549 TATAGACAGTTGTACGAGAGACTATTAAAAGACGTGGGCACATCCTCGCCGGAGCAAGAG 1608 Query 1572 ATAGTATCCTAGTAGGTGTTGGTGTTTTCGGCTGAAAGAGATATACATAGCTCTAATAAT 1631 |||||| | | |||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1609 ATAGTAAC-T--TAGGTGTTGGTGTTTTCGGCTGAA-GAGATATACATAGCTCTAATAAT 1664 Query 1632 TTATCATATGGTACACACCATCCATGTTCATA-A-TTTATTATCTTAAGTATATATCAAA 1689 ||||||||||| |||||||||||||||||||| | ||||||||||||||||||||| ||| Sbjct 1665 TTATCATATGGAACACACCATCCATGTTCATATAATTTATTATCTTAAGTATATATAAAA 1724 Query 1690 GGAGCTCGATTTATATGATTAGTGCAAATA 1719 |||||||||||||||||||||||||||||| Sbjct 1725 GGAGCTCGATTTATATGATTAGTGCAAATA 1754 > AT1G48260.1 | Symbols: CIPK17, SnRK3.21 | CBL-interacting protein kinase 17 | chr1:17813976-17817283 REVERSE LENGTH=1606 Length=1606 Score = 881 bits (477), Expect = 0.0 Identities = 1039/1303 (80%), Gaps = 67/1303 (5%) Strand=Plus/Plus Query 279 AAGGGAATGCGTCTGGGTAAATACGAGCTTGGTAGGACGCTCGGCGAGGGTAATTTCGGT 338 |||||||||||| | ||||| ||||||||||| ||||| ||||| ||||| |||| || Sbjct 67 AAGGGAATGCGTGTTGGTAAGTACGAGCTTGGGAGGACACTCGGAGAGGGAAATTCCGCA 126 Query 339 AAAGTTAAATTCGCTAGAGATACCGTC-T-CCGGTC-AATCCGTCGCTGTTAAAATTATC 395 ||||||||||| |||| ||||| | || | |||| | |||| |||| | ||||| ||| Sbjct 127 AAAGTTAAATTTGCTATAGATA-C-TCTTACCGG-CGAATCATTCGCCATCAAAATCATC 183 Query 396 GACAAGTC-TCGTATCGC-CGATCTCAACTTCTCCTTACAGGTTTGCATAAAAAGAGAGA 453 || ||||| | ||||| | || ||| ||| |||| || || | || || ||||||| Sbjct 184 GAGAAGTCGT-GTATCACACG-TCTTAACGTCTCTTTTCA-----G-ATTAAGAGAGAGA 235 Query 454 TCCGGACTCTGAAAATGTTGAAGCATCCCCACATTGTTAGATTACATGAGGTATTGGCTA 513 | || || || ||| | ||||||||||| ||||||| ||||||||||||| ||||||| Sbjct 236 TTCGAACACTCAAAGTTTTGAAGCATCCAAACATTGTCCGATTACATGAGGTCTTGGCTA 295 Query 514 GCAAAACGAAAATTAATATGGTAATGGAACT-TGTTACCGGAGGAGAATTGTTCGACAGA 572 ||||||| || ||| | ||||| ||||| | ||| || |||||||| || || |||||| Sbjct 296 GCAAAACCAAGATTTACATGGTTCTGGAA-TGTGTCACTGGAGGAGACTTATTTGACAGA 354 Query 573 ATTGTTTCCAACGGAAA-ATTAACAGAAACTGATGGAAGAAAAATGTTTCAGCAGCTGAT 631 ||||| || || ||||| || | ||||| | ||| ||||||||||||||||| |||| Sbjct 355 ATTGTCTCGAAAGGAAAGCTT-TCGGAAACACAAGGACGAAAAATGTTTCAGCAGTTGAT 413 Query 632 TGATGGAATCAGCTACTGTCACAGCAAAGGTGTTTTCCACCGGGATCTCAAGCTAGAGAA 691 ||||||| ||||||| ||||| | ||| || ||||| ||| ||||||||||||||||||| Sbjct 414 TGATGGAGTCAGCTATTGTCATAACAAGGGCGTTTTTCACAGGGATCTCAAGCTAGAGAA 473 Query 692 TGTTCTTCTTGATGCAAAGGGACATATAAAGATCACTGATTTTGGCCTCAGTGCCCTGCC 751 ||||||||||||||||||||| || || |||||||||||||||||||| ||||| ||| | Sbjct 474 TGTTCTTCTTGATGCAAAGGGTCACATTAAGATCACTGATTTTGGCCTTAGTGCTCTGTC 533 Query 752 TCAGCATTTTAGGGATGACGGATTGTTGCATACAACCTGTGGAAGTCCTAATTACGTTGC 811 ||| |||| |||||| || || ||| | |||||||| ||||| |||||||| || || || Sbjct 534 TCAACATTATAGGGAAGATGGGTTGCTACATACAACTTGTGGTAGTCCTAACTATGTCGC 593 Query 812 GCCTGAGGTTTTAGCCAACAGAGGT-TACGATGGTGCAGCGTCAGATATATGGTCGTGTG 870 |||||||||| |||| || |||| || ||||||||||| |||||||||||||| |||| Sbjct 594 GCCTGAGGTTCTAGCTAAT-GAGGGCTATGATGGTGCAGCATCAGATATATGGTCATGTG 652 Query 871 GTGTAATCTTGTATGTGATTCTAACCGGATGTCTTCCTTTTGACGATAG-AAACCTTGTA 929 | |||||||||||||| ||||| || |||||||| |||||||| ||| | |||||||| | Sbjct 653 GAGTAATCTTGTATGTTATTCTTACGGGATGTCTCCCTTTTGATGAT-GCAAACCTTGCA 711 Query 930 GTTCTTTACCAGAAGATATGCAAAGGAGA-CCCACCAATACCAAGATGGTTATCACCAGG 988 ||| ||| || |||||||| |||||| || ||| |||||||| |||||| |||||| || Sbjct 712 GTTATTTGCCGGAAGATATTCAAAGGGGATCCC-CCAATACCTAGATGGATATCACTGGG 770 Query 989 TGC-AAGAACCATGATTAAGAGAATGCTCGATCCAAATCCAGTCACCAGGATCACAGTCG 1047 || || ||| ||||| ||||||||||| ||||| ||||||||||| ||| | ||| ||| Sbjct 771 AGCTAA-AACTATGATCAAGAGAATGCTTGATCCTAATCCAGTCACGAGGGTGACAATCG 829 Query 1048 TGGGTATTAAAG-C-CAGCGAGTGGTTCAAACACGAGTATATTCCTTCAAT-TCCCGATG 1104 ||||| |||| | || || ||||| ||||| || || | |||||||| | | |||| Sbjct 830 CAGGTAT-AAAGGCTCAT-GATTGGTTTAAACATGACTACACTCCTTCAAACTAC-GATG 886 Query 1105 ATGATGACGAAGAAGAAGTTGA-CACAGACGATGATGCTTTCTCAATCCAAGAACTCGGA 1163 | || || || | | | |||| | || | || |||| ||| | | | | ||| ||| Sbjct 887 ACGACGATGATGTATAC-TTGATC-CA-A-GAAGATGTTTT-T-A-TG-ATGAA---GGA 935 Query 1164 -TCA-GAAGAAGGGAAGGGCAGTGATTCACCAACGATCATCAATGCGTTTCAGTTAATCG 1221 | | ||||||| |||| || |||||| ||||| || ||||| || |||||||| || | Sbjct 936 AT-ATGAAGAAGAGAAGAGCCCTGATTCTCCAACCATTATCAACGCTTTTCAGTTGATTG 994 Query 1222 GAATGTCTTCCTTTCTTGACCTGTCCGGTTTCTTTGA-ACAAGAGAA-TGTATCAGAGAG 1279 ||||||| || ||||| ||||| || ||||||||||| ||| ||||| | |||||||||| Sbjct 995 GAATGTCCTCGTTTCTCGACCTCTCAGGTTTCTTTGAGACA-GAGAAAT-TATCAGAGAG 1052 Query 1280 G-AGAATAAGATTCACTTCAAATAGCTCCGCAAAAGATTTACTCGAGAAAATCGAAACAG 1338 | ||| |||||||||| |||||||| | || |||||||| | ||||| |||||||| | Sbjct 1053 GCAGA-TAAGATTCACGTCAAATAGTTTAGCTAAAGATTTGTTGGAGAACATCGAAAC-G 1110 Query 1339 CCGTT-ACAGAGATGGGATTCAGTGTACaaaagaaacatgcgaagttaaaagtaaaacaa 1397 || || |||||||| || || |||| ||||||||||| |||||||||| || ||| Sbjct 1111 ATTTTCACGGAGATGGGCTTTTGTTTACAGAAGAAACATGCAAAGTTAAAAGCAAT-CAA 1169 Query 1398 -gaagaaagaaac-cagaaa-gGTCAA-GTTGGTTTATCAGTAACAGCTGAGGTTTTCGA 1453 |||||||| | | || ||| || ||| | |||||||| ||||| |||||||||||||| Sbjct 1170 AGAAGAAAGCA-CTCAAAAAAGG-CAATGC-GGTTTATCGGTAACGGCTGAGGTTTTCGA 1226 Query 1454 GATAAAACCGTCACTGAACGTGGTTGAGCTAAGAAAATCTTATGGCGATTCATGTTTATA 1513 ||||| ||||| ||||| |||||||| ||||||||||| |||||||||| | | |||| Sbjct 1227 GATAAGTCCGTCCCTGAATGTGGTTGAACTAAGAAAATCACATGGCGATTCGTCTCTATA 1286 Query 1514 TAGACAGTTGTACGAGAGACTATTAAAAGA-CGTGGGCACATC 1555 || ||||||||||||| || |||| || || | ||||| |||| Sbjct 1287 TAAACAGTTGTACGAGCGATTATTGAATGAGC-TGGGCTCATC 1328 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 88804764105 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5