BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479250 Length=832 Score E Sequences producing significant alignments: (Bits) Value AT3G17670.2 | Symbols: | tetratricopeptide repeat (TPR)-contai... 1195 0.0 > AT3G17670.2 | Symbols: | tetratricopeptide repeat (TPR)-containing protein | chr3:6040820-6042588 FORWARD LENGTH=885 Length=885 Score = 1195 bits (647), Expect = 0.0 Identities = 704/732 (96%), Gaps = 1/732 (0%) Strand=Plus/Plus Query 1 GTGGTTCGATATTCTTATCGTTATGTCTTCCGTCGCTTTGCCGGCGATGAGCTGCCGGAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 16 GTGGTTCGATATTCTTATCGTTATGTCTTCCGTCGCTTTGCCGGCGATGAGCTGCCGGAG 75 Query 61 CTCAGGAGAACAAGTAAAGGAGATTCGCGTTTGTACGAATCGCACCTGCCGGAGACAAGG 120 |||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 76 CTCAGGTGAACAAGTGAAGGAGATTCGCGTTTGTACGAATCGCACCTGCCGAAGACAAGG 135 Query 121 CTCCTTCCAGATTCTCGAGACATTAACAGCTCTCGCACCTCCCGAACTCCGAGTCACTCC 180 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 136 CTCCTTCCAGATTCTCGAGACTTTAACAGCTCTCGCACCTCCCGAACTCCGAGTCACTCA 195 Query 181 CTGCGCTTGCCTCGGCCGATGCGGCTCTGGTCCAAACCTCGTGGCTCTCCCTCAAGGTCT 240 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 196 CTGCGCTTGCCTCGGCCGATGCGGCTCCGGTCCAAACCTCGTGGCTCTCCCTCAAGGTCT 255 Query 241 CATCCTCCGTCACTGCGCCACGCCTTCTCGAGCTGCTGAAATTTTGTTCAGCCTCTGTGG 300 |||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 256 CATCCTACGTCACTGCGCCACGCCTTCTCGAGCTGCTGAAATTTTGTTCAGCCTATGTGG 315 Query 301 TGACGGTCGTGAAGCTTCTTCATCCTCCGCCGTCACAGACGCTCTCACCGCTTTAGCGTT 360 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 316 TGACGGTCGTGAAGCTTCTTCATCCTCCGCCGTCACAGACGCTCTCACGGCTTTAGCGTT 375 Query 361 AACCAACAATGCTCTCTATCAAATCGATGCGGGAAATTTCTCTGAAGCCGAAGCACTTCT 420 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 376 AACCAACAATGCTCTCTCTCAAATCGATGCGGGAAATTTCTCTGAAGCCGAAGCACTTCT 435 Query 421 CACTCAGGCATTAGAGCTGAAACCATACGGTGGCTTGCATAGAATCTTCAAACACAGATC 480 ||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 436 CACTCAGGCTTTAGAGCTGAAACCCTACGGTGGCTTGCATAGAATATTCAAACACAGATC 495 Query 481 AGTAGCAAAACTGGGAATGCTTGATTATTCTGGGGCTCTTGAAGATATAAGCCGTGCTCT 540 |||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct 496 AGTAGCAAAATTGGGAATGCTTGATTACTCTGGGGCTCTTGAAGATATAAGCCAAGCTCT 555 Query 541 AGCATTAGCTCCTAACTATTATGAGCCATACATATGCCAAGGGGATGTCTACGTAGCAAA 600 ||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||| Sbjct 556 AGCTTTAGCTCCTAACTATTCTGAGCCCTACATATGCCAAGGGGATGTCTACGTAGCAAA 615 Query 601 GGGTCAATACGATCTTGCAGAGAAGTCATACGTGAAATGTCTAGAGATAGATCCTTCTCT 660 |||||||| ||||||||||||||||||||| ||| |||||||||||||||||||||||| Sbjct 616 AGGTCAATATGATCTTGCAGAGAAGTCATACTTGACATGTCTAGAGATAGATCCTTCTCT 675 Query 661 TCGCAGATCGAAACCATTCAAGGCCCGGATTGCGAACCTTCAACAGAAAGTTGTTGAAGT 720 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct 676 TCGCAGATCGAAACCATTCAAGGCCCGGATTGCGAAACTTCAACAGAAAGTTGTTGAACT 735 Query 721 AGATGTGACATA 732 |||| ||| ||| Sbjct 736 AGATTTGA-ATA 746 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 40538956629 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5