BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg479430
Length=3523
Score E
Sequences producing significant alignments: (Bits) Value
AT3G19170.1 | Symbols: ATPREP1, ATZNMP, PREP1 | presequence pro... 5803 0.0
AT1G49630.1 | Symbols: ATPREP2, PREP2 | presequence protease 2 ... 3531 0.0
> AT3G19170.1 | Symbols: ATPREP1, ATZNMP, PREP1 | presequence protease
1 | chr3:6625421-6632033 REVERSE LENGTH=3559
Length=3559
Score = 5803 bits (3142), Expect = 0.0
Identities = 3376/3488 (97%), Gaps = 20/3488 (1%)
Strand=Plus/Plus
Query 1 TATTTTACTTTTTTCCTCGACAAGTAAAAACAAAACACACAATGACACAAGGATAAAACC 60
|||||||||||||||||| ||||| |||||| ||||| | | ||||||||||||||||
Sbjct 10 TATTTTACTTTTTTCCTCTACAAGCAAAAAC---ACACA-ACT-ACACAAGGATAAAACC 64
Query 61 TCTTTTGCCGTTGGGTTTATTTTA-CTTCTTTGCAATATCCTT-ATTTCGTCTCCGTCAG 118
|| ||||||||||||||| |||| |||||||||||||||||| ||||||||||||||||
Sbjct 65 TC--TTGCCGTTGGGTTTA-TTTAGCTTCTTTGCAATATCCTTAATTTCGTCTCCGTCAG 121
Query 119 TAGCAGTCTTCGCCGGGAA-A-TATATTTCCGGTAGCGATGCTCCGGACCGTATCTTGTT 176
||||||||| ||||||||| | | | ||||||||||| |||||||| ||||| |||||||
Sbjct 122 TAGCAGTCTCCGCCGGGAATATTTTTTTTCCGGTAGCTATGCTCCGAACCGTCTCTTGTT 181
Query 177 TAGCTTCGCGCAGCTCGGCCTCTCTATTCTTTCGCTTCTTTCGTCAGTTCCCTCGCTCTT 236
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 TAGCTTCGCGCAGCTCGTCCTCTCTATTCTTTCGCTTCTTTCGTCAGTTCCCTCGCTCTT 241
Query 237 ACATGTCTCTAACATCGTCGACGGCCGCTCTCCATGTCCCCAGTCGCAATCTTCGCCGGA 296
|||||||||| |||||||||||||| ||||||| |||||||||||||||||||||||| |
Sbjct 242 ACATGTCTCTCACATCGTCGACGGCAGCTCTCCGTGTCCCCAGTCGCAATCTTCGCCGAA 301
Query 297 TTTCCTCTCCTTCAGTTGCCGGAAGACGTCTCTTT-CTCCGCCGAGGTTTGAGGATTCCC 355
|||||||||| ||||| ||||| |||||||| ||| ||||| ||||||||||||||||||
Sbjct 302 TTTCCTCTCCCTCAGTCGCCGGTAGACGTCT-TTTGCTCCGACGAGGTTTGAGGATTCCC 360
Query 356 TCCGCCGCAGTTCGTAGTGTCAATGGGCAGTTCTCTCGCCTCTCTGTTCGCGCCGTCGCC 415
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 TCCGCCGCAGTTCGCAGTGTCAATGGGCAGTTCTCTCGCCTCTCTGTTCGCGCCGTCGCC 420
Query 416 ACACAACCCGCACCACTTTATCCCGATGTAGGTCAAGATGAGGCTGAGAAGCTTGGATTT 475
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 421 ACACAACCCGCTCCACTTTATCCTGATGTAGGTCAAGATGAGGCTGAGAAGCTTGGATTT 480
Query 476 GAAAAAGTGTCGGAAGAATTCATCTCAGAGTGTAAATCAAAGGCGATTCTCTTCAAACAC 535
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 481 GAAAAAGTGTCGGAAGAATTCATCTCAGAGTGTAAATCAAAGGCGATACTCTTCAAACAC 540
Query 536 AAGAAAACTGGTTGCGAGGTGATGTCTGTGTCAAACGAGGATGAGAACAAGGTCTTCGGC 595
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 541 AAGAAAACTGGTTGCGAGGTGATGTCTGTGTCAAATGAGGATGAGAACAAGGTCTTCGGT 600
Query 596 GTTGTTTTCAGGACTCCTCCGAAGGATTCCACTGGCATTCCGCACATACTGGAACATAGC 655
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GTTGTTTTCAGAACTCCTCCGAAGGATTCCACTGGCATTCCGCACATACTGGAACATAGC 660
Query 656 GTTCTATGTGGGTCAAGAAAGTACCCGCTAAAAGAGCCATTTGTTGAACTACTCAAGGGA 715
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 661 GTTCTATGTGGGTCAAGAAAGTACCCGGTAAAAGAGCCATTTGTTGAACTACTCAAGGGA 720
Query 716 AGTTTGCATACTTTTCTAAATGCATTCACATATCCGGATAGGACCTGCTACCCAGTTGCT 775
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 721 AGTTTGCATACTTTTCTAAATGCATTCACATATCCTGATAGGACCTGCTACCCAGTTGCT 780
Query 776 TCCACCAATACAAAGGATTTTTACAATCTTGTCGATGTATATTTGGATGCTGTCTTCTTC 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 TCCACCAATACAAAGGATTTTTACAATCTTGTCGATGTATATTTGGATGCTGTCTTCTTC 840
Query 836 CCCAAGTGTGTGGATGACG-TGCACACCTTTCAGCAAGAGGGCTGGCACTATGAGCTTAA 894
||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||
Sbjct 841 CCCAAGTGTGTGGATGACGCT-CACACCTTTCAGCAAGAGGGCTGGCACTATGAACTTAA 899
Query 895 TGATCCCTCTGAAGACATATCTTACAAAGGTGTTGTTTTTAATGAGATGAAAGGTGTCTA 954
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 900 TGATCCCTCGGAAGACATATCTTACAAAGGTGTTGTTTTTAATGAGATGAAAGGGGTCTA 959
Query 955 TTCACAGCCTGATAATATTTTAGGGCGAATTGCTCAACAGGCCTTATTAATCCCAGAAAA 1014
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 960 TTCACAGCCTGATAATATTTTAGGGCGAATTGCTCAACAGGCCTTA-T--CCCCAGAAAA 1016
Query 1015 TACATATGGTGTTGACAGTGGAGGTGATCCAAAAGATATCCCTAAGCTGACATTTGAGGA 1074
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct 1017 TACATATGGTGTTGACAGTGGAGGTGATCCAAAAGATATTCCTAATCTGACATTTGAGGA 1076
Query 1075 ATTCAAGGAGTTCCACCGTCAGTATTATCACCCAAGCAATGCCAGGATCTGGTTCTATGG 1134
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct 1077 ATTCAAGGAGTTCCACCGTCAATATTATCACCCAAGCAACGCCAGGATCTGGTTCTATGG 1136
Query 1135 AGATGATGATCCCGTTCACCGCCTTCGTGTCTTAAGTGAATACTTGGACATGTTTGAAGC 1194
|||||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||
Sbjct 1137 AGATGATGATCCCGTTCACCGCCTCCGTGTCTTGAGTGAATACTTGGATATGTTTGAAGC 1196
Query 1195 AAGTCCATCTCCCGATAGTTCAAAGATTAAACCTCAAAAGTTATTCTCTGAGCCTGTCAG 1254
||||||||||||| ||||||||||||||||| ||||||| |||||||||||||||||||
Sbjct 1197 AAGTCCATCTCCCAATAGTTCAAAGATTAAATTTCAAAAGCTATTCTCTGAGCCTGTCAG 1256
Query 1255 ACTGGTTGAGAAATATCCTGCTGGTCGAGATGGTGACCTTAAAAAGAAGCACATGTTGTG 1314
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1257 ACTGGTTGAGAAATATCCTGCTGGTCGAGATGGTGACCTTAAAAAGAAGCATATGTTGTG 1316
Query 1315 TGTTAACTGGCTATTGTCTGAGAAGCCCTTGGACTTGCAAACTCAACTTGCACTTGGCTT 1374
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1317 CGTTAACTGGCTATTGTCTGAGAAGCCCTTGGACTTGCAAACTCAACTTGCACTTGGCTT 1376
Query 1375 CTTGGATCATCTTATGCTGGGGACTCCTGCTTCACCACTAAGAAAAATCTTATTGGAAAG 1434
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1377 CTTGGATCATCTTATGCTGGGGACTCCTGCTTCACCACTAAGAAAGATCTTATTGGAAAG 1436
Query 1435 CGGTTTAGGAGAAGCTCTTGTCAGTAGTGGGTTGTCAGACGAACTCTTGCAGCCCCAGTT 1494
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1437 CGGTTTAGGAGAAGCTCTTGTCAGTAGTGGGTTGTCAGACGAACTCTTGCAGCCCCAGTT 1496
Query 1495 CAGTATTGGTTTGAAAGGTGTGTCCGAAGATAATGTTCAAAAGGTTGAAGAGTTGATCAT 1554
| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1497 CGGTATTGGTTTGAAAGGTGTGTCCGAAGAGAATGTTCAAAAGGTTGAAGAGTTGATCAT 1556
Query 1555 GGATACTCTGAAAAAGTTGGCAGAAGAAGGGTTTGACAATGATGCTGTGGAGGCATCCAT 1614
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1557 GGATACTCTGAAAAAGTTGGCAGAAGAAGGGTTTGACAATGATGCTGTGGAGGCATCCAT 1616
Query 1615 GAATACAATTGAGTTTTCTCTGAGGGAAAACAACACAGGATCTTTCCCTCGTGGTTTATC 1674
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 GAATACAATTGAGTTTTCTTTGAGGGAAAACAACACAGGATCTTTCCCTCGTGGTTTATC 1676
Query 1675 ACTTATGCTCCAATCTATTGCAAAATGGATATACGATATGGATCCTTTTGAGCCATTAAA 1734
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1677 ACTTATGCTCCAATCTATTTCAAAATGGATATACGATATGGATCCTTTTGAGCCATTAAA 1736
Query 1735 GTATACGGAACCATTGAAGGCCCTGAAAACCAGAATAGCGGAGGAGGGATCCAAGGCCGT 1794
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||
Sbjct 1737 GTATACGGAACCATTGAAGGCCCTGAAAACCAGAATAGCTGAGGAGGGATCCAAGGCTGT 1796
Query 1795 CTTTTCCCCACTGATAGAGAAGTTTATCTTGAACAACTCGCATCGTGTTACCATAGAGAT 1854
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1797 CTTTTCCCCACTGATAGAGAAGCTTATCTTGAACAACTCGCATCGTGTTACCATAGAGAT 1856
Query 1855 GCAGCCTGATCCCGAAAAAGCTACTCAAGAGGAAGTGGAAGAGAAAAATATCCTGGAAAA 1914
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 GCAGCCTGATCCTGAAAAAGCTACTCAAGAGGAAGTGGAAGAGAAAAATATCCTGGAAAA 1916
Query 1915 AGTCAAAGCAGCTATGACAGAAGAAGATCTTGCAGAGCTAGCACGTGCTACAGAGGAGCT 1974
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 AGTTAAAGCAGCTATGACAGAAGAAGATCTTGCAGAGCTAGCACGTGCTACAGAGGAGCT 1976
Query 1975 AAAATTGAAACAAGAAACTCCTGACCCTCCTGAAGCATTGAGATGTGTCCCAAGTTTGAA 2034
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 GAAATTGAAACAAGAAACTCCTGACCCTCCTGAAGCATTGAGATGTGTCCCAAGTTTGAA 2036
Query 2035 CTTGGGTGACATTCCAAAAGAACCTACTTATGTTCCCACCGAGGTTGGAGATATTAATGG 2094
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2037 CTTGGGTGACATTCCAAAAGAACCTACTTATGTTCCCACCGAGGTTGGAGATATTAATGG 2096
Query 2095 TGTGAAGGTTTTGCGGCATGACCTTTTCACCAATGATATAATCTACGCTGAAGTAGTCTT 2154
||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||
Sbjct 2097 TGTGAAGGTTTTGCGGCATGACCTTTTCACCAATGATATTATCTATACTGAAGTAGTCTT 2156
Query 2155 TGATATTGGTTCCCTGAAACATGAGCTTCTTCCACTAGTACCACTTTTCTGTCAATCATT 2214
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2157 TGATATTGGTTCGCTGAAACATGAGCTTCTTCCACTAGTACCACTTTTCTGTCAATCATT 2216
Query 2215 ACTGGAGATGGGCACAAAAGATTTGACTTTTGTTCAACTTAATCAGTTGATTGGAAGGAA 2274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217 ACTGGAGATGGGCACAAAAGATTTGACTTTTGTTCAACTTAATCAGTTGATTGGAAGGAA 2276
Query 2275 AACGGGAGGGATATCAGTTTATCCCCTTACATCATCAGTGAGGGGTAAGGATGAACCATG 2334
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2277 AACGGGAGGGATATCAGTTTATCCCCTTACATCATCAGTGAGGGGTAAGGATGAACCATG 2336
Query 2335 CAGCAAAATTATCATACGCGGAAAATCCATGGCTGGGCGTGCTGACGACCTTTTTAACCT 2394
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2337 CAGCAAAATTATCGTACGCGGAAAATCCATGGCTGGGCGTGCTGACGACCTTTTTAACCT 2396
Query 2395 GATGAATTGCTTGTTGCAAGAGGTTCAATTTACAGATCAGCAGAGGTTTAAACAGTTTGT 2454
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2397 GATGAACTGCTTGTTGCAAGAGGTTCAATTTACAGATCAGCAGAGGTTTAAACAGTTTGT 2456
Query 2455 CTCTCAAAGCAGAGCACGGATGGAGAACCGATTGAGGGGAAGTGGTCATGGAATTGCTGC 2514
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2457 CTCTCAAAGCAGAGCACGGATGGAGAACCGATTGAGGGGAAGTGGTCATGGAATTGCTGC 2516
Query 2515 GGCGAGAATGGATGCAATGTTGAACATTGCTGGATGGATGTCTGAACAGATGGGTGGTCT 2574
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GGCGAGGATGGATGCAATGTTGAACATTGCTGGATGGATGTCTGAACAGATGGGTGGTCT 2576
Query 2575 CAGCTATCTTGAATTTTTACATACTCTTGAAAAGAAAGTGGATGAAGACTGGGAAGGAAT 2634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2577 CAGCTATCTTGAATTTTTACATACTCTTGAAAAGAAAGTGGATGAAGACTGGGAAGGAAT 2636
Query 2635 TTCATCCTCACTTGAGGAGATCAGAAGATCTCTCCTTGCCAGGAATGGTTGCATAGTTAA 2694
||||||||| ||||||||||||||||||||||||||||| || || ||||||||||||||
Sbjct 2637 TTCATCCTCGCTTGAGGAGATCAGAAGATCTCTCCTTGCTAGAAACGGTTGCATAGTTAA 2696
Query 2695 CATGACTGCTGATGGGAAGTCTCTCACCAACGTCGAAAAATCTGTTGCGAAATTTCTAGA 2754
|||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct 2697 TATGACTGCTGATGGGAAGTCTCTCACAAATGTCGAAAAATCTGTTGCAAAATTTCTAGA 2756
Query 2755 TTTACTCCCTGAGAACCCCTCCGGTGGGCTGGTCACTTGGGATGGTCGACTTCCTCTCAG 2814
|||||||||||||||||| || |||||||| |||||||||||||||||||||||||| ||
Sbjct 2757 TTTACTCCCTGAGAACCCGTCTGGTGGGCTTGTCACTTGGGATGGTCGACTTCCTCTGAG 2816
Query 2815 AAATGAAGCAATTGTGATACCAACCCAGGTAAACTATGTTGGAAAAGCGGGTAACATATA 2874
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2817 AAATGAAGCCATTGTAATACCAACCCAGGTAAACTATGTTGGAAAAGCGGGTAACATATA 2876
Query 2875 CAGCACCGGGTATGAGCTTGATGGCAGTGCATATGTTATATCAAAGCATATAAGCAATAC 2934
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 2877 CAGCACCGGGTATGAGCTTGATGGCAGTGCGTATGTTATATCAAAGCATATTAGCAATAC 2936
Query 2935 ATGGTTATGGGATCGTGTTCGTGTAAGCGGTGGTGCATATGGAGGTTTCTGTGATTTCGA 2994
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2937 ATGGTTATGGGATCGTGTTCGTGTAAGTGGTGGTGCATATGGAGGTTTCTGTGATTTCGA 2996
Query 2995 TTCGCATTCAGGAGTATTTTCTTACTTATCTTACCGGGATCCAAACTTGTTGAAGACACT 3054
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2997 TTCGCATTCAGGAGTATTTTCTTACTTATCGTACCGGGATCCAAACTTGTTGAAGACACT 3056
Query 3055 TGACATATATGATGGAACTGGAGATTTCTTACGTGGCCTTGATGTGGATCAAGAAACACT 3114
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3057 TGATATATATGATGGAACTGGAGATTTCTTACGTGGCCTTGATGTGGATCAAGAAACACT 3116
Query 3115 CACTAAAGCTATTATTGGCACCATCGGTGATGTTGATTCATACCAATTACCTGATGCCAA 3174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3117 CACTAAAGCTATTATTGGCACCATCGGTGATGTTGATTCATACCAATTACCTGATGCCAA 3176
Query 3175 AGGTTATAGCAGTTTGTTGAGGCATTTACTCGGAGTAACTGACGAAGAACGACAAAGAAA 3234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3177 AGGTTATAGCAGTTTGTTGAGGCATTTACTCGGAGTAACTGACGAAGAACGACAAAGAAA 3236
Query 3235 GCGTGAAGAGATACTAACAACAAGTTTGAAGGACTTCAAGGATTTCGCAGAAGCAATAGA 3294
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3237 GCGTGAAGAGATACTAACAACAAGTTTGAAGGACTTCAAGGATTTCGCACAAGCAATAGA 3296
Query 3295 TGCGGTTAGAGATAATGGTGTTGCGGTGGCTGTGGCATCCGCAGAAGACATTGATGCAGC 3354
|| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3297 TGTGGTTAGAGATAAAGGTGTTGCGGTGGCTGTGGCATCCGCGGAAGACATTGATGCAGC 3356
Query 3355 AAACAATGAACGCTCCAACTTTTTCGAGGTGAAGAAAGCTCTCTAAAGGGATTGGACAAC 3414
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3357 GAACAATGAACGCTCCAACTTTTTCGAGGTGAAGAAAGCTCTCTAAACAGATTGGACAAC 3416
Query 3415 TTTCAC-AATAATATTTACGATTGAGAATCTCATTAGATTTCTCTTGGTTTCTTTTCTAC 3473
||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3417 TTTCAGTAATACTATTTACGATTGAGAATCTCATTAGATTTCTCTTGGTTTCTTTTCTAC 3476
Query 3474 TAGAGTCA 3481
||||||
Sbjct 3477 CGGAGTCA 3484
> AT1G49630.1 | Symbols: ATPREP2, PREP2 | presequence protease
2 | chr1:18367594-18375381 REVERSE LENGTH=3582
Length=3582
Score = 3531 bits (1912), Expect = 0.0
Identities = 2860/3312 (86%), Gaps = 87/3312 (3%)
Strand=Plus/Plus
Query 122 CAGTCTTCGCCGG-GAAATATATTTCCGGTAGCGATGCTCCGGACCGTATCTTGTTTAGC 180
||||||| ||||| |||| ||| |||||||||| ||||||||| | || |||| || |
Sbjct 14 CAGTCTTTGCCGGAGAAA-ATA-TTCCGGTAGCCATGCTCCGGTCATTAACTTG-TT--C 68
Query 181 TTCG-CGCA--GC-TCGGCCTCTCTATTCTTTCGCTTCTTT-CGTCAGTTCCCTCGCTCT 235
||| | || | ||| ||||||| ||||| ||| ||||| || ||| |||||||||||
Sbjct 69 CTCGAC-CATTACTTCGACCTCTCTCTTCTTCCGC-TCTTTCCGCCAGCTCCCTCGCTCT 126
Query 236 TACATGTCTCTAACATCGTCGACGGCCGCTC-TCCATGTCC-CCAGTCGCAATC-TTCGC 292
||| |||||| ||||||| ||| ||| || || || || || | ||||| | |||||
Sbjct 127 TACTTGTCTCCCTCATCGTCAACGACCG-TCGTCGGTG-CCTCCGGCCGCAA-CATTCGC 183
Query 293 CGGATTTCCT-CTCCT-TCAGTTGCCGGAAGACGTCTCTTTCTCCGCCGAGGTTTGAGGA 350
||| ||| || || || || ||| || ||||| || ||||| || ||||| |||| |
Sbjct 184 CGGCTTT-CTACT-CTAGAAGCTGCTGGGAGACGGCTATTTCTACGACGAGGCTTGA-AA 240
Query 351 -TTCCCTCCGCCGC-AGTTCGTAGTGTCAATGGGCAGTTCTCTCGCCTCTCTGTTCGCGC 408
| | ||||||||| || |||| || ||||||| |||||||||||| | ||| |||||||
Sbjct 241 CTACTCTCCGCCGCGAG-TCGTGGTCTCAATGGACAGTTCTCTCGCTTATCTATTCGCGC 299
Query 409 CGTCGCCACACAACCCGCACCACTTTATCCCGATGTAGGTCAAGATGAGGCTGAGAAGCT 468
|||||| |||||| ||||| | | || | | || |||||||||||||||||||||||
Sbjct 300 CGTCGCTACACAATCCGCA-C-C-TTCTTCTTATCCCGGTCAAGATGAGGCTGAGAAGCT 356
Query 469 TGGATTTGAAAAAGTGTCGGAAGAATTCATCTCAGAGTGTAAATCAAAGGC-GATTCTCT 527
||||||||| ||||| || ||||| || ||||||||||||||||| ||||| | ||||||
Sbjct 357 TGGATTTGAGAAAGTCTCTGAAGAGTTTATCTCAGAGTGTAAATCTAAGGCTG-TTCTCT 415
Query 528 TCAAACACAAGAAAACTGGTTGCGAGGTGATGTCTGTGTCAAACGAGGATGAGAACAAGG 587
||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||
Sbjct 416 TCAAACACAAGAAAACTGGTTGCGAGGTGATGTCTGTTTCTAACGATGATGAGAACAAGG 475
Query 588 TCTTCGGCGTTGTTTTCAGGACTCCTCCGAAGGATTCCACTGGCATTCCGCACATACTGG 647
| || ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 476 TGTTTGGCATTGTTTTCAGGACTCCTCCGAAGGATTCCACTGGCATTCCTCACATACTGG 535
Query 648 AACATAGCGT-TCTATGTGGGTCAAGAAAGTACCCGCTAAAAGAGCCATTTGTTGAACTA 706
|||||||||| | ||||||||||||||||||||||| | ||||| |||||||| ||| ||
Sbjct 536 AACATAGCGTAT-TATGTGGGTCAAGAAAGTACCCGATGAAAGAACCATTTGTCGAATTA 594
Query 707 CTCAAGGGAAGTTTGCATACTTTTCTAAATGCATTCACATATCCGGATAGGACCTGCTAC 766
| |||||||||||||||||||| ||||| |||||||||||||| |||||||| || |||
Sbjct 595 TTAAAGGGAAGTTTGCATACTTTCCTAAACGCATTCACATATCCTGATAGGACTTGTTAC 654
Query 767 CCAGTTGCTTCCACCAATACAAAGGATTTTTACAATCTTGTCGATGTATATTTGGATGCT 826
|||||||||||||| |||| ||||||||| |||||||||||||||||||| ||||| |||
Sbjct 655 CCAGTTGCTTCCACAAATAAAAAGGATTTCTACAATCTTGTCGATGTATACTTGGACGCT 714
Query 827 GTCTTCTTCCCCAAGTGTGTGGATGACGTGCACACCTTTCAGCAAGAGGGCTGGCACTAT 886
|| ||||||||||||||||||||||| || ||||| |||||||| ||||| ||||| |||
Sbjct 715 GTATTCTTCCCCAAGTGTGTGGATGATGTTCACACTTTTCAGCAGGAGGGTTGGCATTAT 774
Query 887 GAGCTTAATGATCCCTCTGAAGACATATCTTACAAAGGTGTTGTTTTTAATGAGATGAAA 946
|||||||| ||||| || || ||||||||||||||||| |||||||||||||||||||||
Sbjct 775 GAGCTTAACGATCCTTCAGAGGACATATCTTACAAAGGCGTTGTTTTTAATGAGATGAAA 834
Query 947 GGTGTCTATTCACAGCCTGATAATATTTTAGGGCGAATTGCTCAACAGGCCTTATTAATC 1006
|||||||||||||||||||||||||| ||||||| || |||||||||| |||| ||
Sbjct 835 GGTGTCTATTCACAGCCTGATAATATACTAGGGCGGGTTACTCAACAGGCATTATG--TC 892
Query 1007 CCAGAAAATACATATGGTGTTGACAGTGGAGGTGATCCAAAAGATATCCCTAAGCTGACA 1066
| |||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 893 C-AGAAAATACATACGGTGTTGACAGTGGAGGTGATCCAAAAGATATCCCCAAGCTTACG 951
Query 1067 TTTGAGGAATTCAAGGAGTTCCACCGTCAGTATTATCACCCAAGCAATGCCAGGATCTGG 1126
|| ||| |||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 952 TTCGAGAAATTTAAGGAGTTCCACCGTCAGTATTATCACCCTAGCAATGCCAGGATATGG 1011
Query 1127 TTCTATGGAGATGATGATCCCGTTCACCGCCTTCGTGTCTTAAGTGAATACTTGGACATG 1186
|||||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||||
Sbjct 1012 TTCTATGGAGATGACGATCCAGTTCACCGCCTTCGCGTCTTGAGTGAATACTTGGACATG 1071
Query 1187 TTTGAAGCAAGTCCATCTCCCGATAGTTCAAAGATTAAACCTCAAAAG-TTATTCTCT-G 1244
||||| ||||||||| ||| |||||||||||| || |||| |||||| || |||||| |
Sbjct 1072 TTTGATGCAAGTCCAGCTCGAGATAGTTCAAAGGTTGAACCACAAAAGCTT-TTCTCTAG 1130
Query 1245 AGCCT-GTCAG-ACTGGTTGAGAAATATCCTGCTGGTCGA-GATGGTGACCTTAAAAAGA 1301
| ||| || || | || |||| ||||| ||||||||| || |||||||||||||| ||||
Sbjct 1131 A-CCTCGT-AGGATTG-TTGAAAAATACCCTGCTGGT-GAAGATGGTGACCTTAAGAAGA 1186
Query 1302 AGCACATGTTGTGTGTTAACTGGCTAT-TGTCTGAGAAGCC-CTTGGACTTGCAAACTCA 1359
|||| ||| |||| |||||||||| | | ||||| ||||| || |||||| ||||||||
Sbjct 1187 AGCATATGGTGTGCCTTAACTGGCT-TCTCTCTGACAAGCCACT-GGACTTACAAACTCA 1244
Query 1360 ACTTGCACTTGGCTTCTTGGATCATCTTATGCTGGGGACTCCTGCTTCACCACTAAGAAA 1419
||| |||||||| || ||||||||||| ||||| ||||||||||| || ||| | |||||
Sbjct 1245 ACTCGCACTTGGGTTTTTGGATCATCTAATGCTTGGGACTCCTGCCTCCCCATTGAGAAA 1304
Query 1420 AATCTTATTGGAAAGCGGTTTAGGAGAAGCTCTTGTCAGTAGTGGGTTGTCAGACGAACT 1479
|||||||||||||||||||||||||||||||||||| | ||||||| || ||| |||||
Sbjct 1305 AATCTTATTGGAAAGCGGTTTAGGAGAAGCTCTTGTTAATAGTGGGATGGAAGATGAACT 1364
Query 1480 -CTTGCAGCCCCAGTTCAGTATTGGTTTGAAAGGTGTGTCCGAAGATAATGTTCAAAAGG 1538
|| |||||||| |||||||| |||||||||||||| ||||| |||||||| ||||| |
Sbjct 1365 TCTC-CAGCCCCAATTCAGTATAGGTTTGAAAGGTGTTTCCGATGATAATGTCCAAAAAG 1423
Query 1539 TTGAAGAGTTGATCATGGATACTCTGAAAAAGTTGGCAGAAGAAGGGTTTGACAATGATG 1598
||||||||||| ||||| ||||||||| |||||||||||| || |||||||||| |||||
Sbjct 1424 TTGAAGAGTTGGTCATGAATACTCTGAGAAAGTTGGCAGATGAGGGGTTTGACACTGATG 1483
Query 1599 CTGTGGAGGCATCCATGAATACAATTGAGTTTTCTCTGAGGGAAAACAACACAGGATCTT 1658
|||| || |||||||||||||| ||||||||||||||||| |||||||| ||||| || |
Sbjct 1484 CTGTTGAAGCATCCATGAATACCATTGAGTTTTCTCTGAGAGAAAACAATACAGGGTCGT 1543
Query 1659 TCCCTCGTGGTTTATCACTTATGCTCCAATCTATTGCAAAATGGATATACGATATGGATC 1718
|||||||||||||||||||||||| ||||| ||||| |||||||||||||| |||||||
Sbjct 1544 CCCCTCGTGGTTTATCACTTATGCTTCAATCAATTGCGAAATGGATATACGACATGGATC 1603
Query 1719 CTTTTGAGCCATTAAAGTAT-ACGGAACCATTGAAGGCCCTGAAAACCAGAATAGCGGAG 1777
|||||||||||||||||||| | ||||||||||||| |||||||| | |||||||| |||
Sbjct 1604 CTTTTGAGCCATTAAAGTATGA-GGAACCATTGAAGTCCCTGAAAGCTAGAATAGCTGAG 1662
Query 1778 GAGGGATCCAAGGCCGTCTTTTCCCCACTGATAGAGAAGTTTATCTTGAACAACTCGCAT 1837
| ||||||||| | |||||||| || ||||||||| ||| ||| ||||||||| | |||
Sbjct 1663 AAAGGATCCAAGTCTGTCTTTTCTCCGCTGATAGAGGAGTATATTTTGAACAACCCTCAT 1722
Query 1838 CGTGTTACCATAGAGATGCAGCCTGATCCCGAAAAAGCTACTCAAGAGGAAGTGGAAGAG 1897
||||||| |||||||||||||||||||| ||||||||| ||| |||||||| ||| |||
Sbjct 1723 TGTGTTACTATAGAGATGCAGCCTGATCCAGAAAAAGCTTCTCTAGAGGAAGCGGAGGAG 1782
Query 1898 AAAAATATCCTGGAAAAAGTCAAAGCA-GCTATGACAGAAGAAGATCTTGCAGAGCTAGC 1956
|||| ||| || |||||||| |||||| | |||||||||||| |||||| |||| |||||
Sbjct 1783 AAAAGTATTCTAGAAAAAGTTAAAGCAAG-TATGACAGAAGAGGATCTTACAGAACTAGC 1841
Query 1957 ACGTGCTACAGAGGAGCTAAAATTGAAACAAGAAACTCCTGACCCTCCTGAAGCATTGAG 2016
||||| ||||||||| | | |||||| ||||| ||||||||||||||||| ||| |||
Sbjct 1842 GCGTGCCACAGAGGAGTTGAGATTGAAGCAAGAGACTCCTGACCCTCCTGACGCACTGAA 1901
Query 2017 ATGTGTCCCAAGTTTGAACTTGGGTGACATTCCAAAAGAACCTACT-TATGTTCCCACCG 2075
||| || |||||||| || ||| ||||||||||||||||||||| | ||||||||||| |
Sbjct 1902 ATGCGTTCCAAGTTTAAATTTGAGTGACATTCCAAAAGAACCTA-TATATGTTCCCACTG 1960
Query 2076 AGGTTGGAGATATTAATGGTGTGAAGGTTTTGCGGCATGACCT-TTTCACCAATGATATA 2134
||||||||||||||||||| |||||||| |||||| |||| || ||| || ||| |||||
Sbjct 1961 AGGTTGGAGATATTAATGGCGTGAAGGTGTTGCGGAATGATCTCTTT-ACAAATAATATA 2019
Query 2135 ATCTACGCTGAAGTAGTCTTTGATATTGGTTCCCTGAAA-CATGAGCTTCTTCCACT-AG 2192
||||| ||||||||||||||||||| || || | ||| ||||||||||||| ||| |
Sbjct 2020 CTCTACACTGAAGTAGTCTTTGATATGGGCTCAGT-AAAGCATGAGCTTCTTCAACTGA- 2077
Query 2193 TACCACTTTTCTGTCAATCATTACTGGAGATGGGCACAAAAGATTTGACTTTTGTTCAAC 2252
|||| || ||||||||||||||||| ||||||||||| |||||||||||||||| ||||
Sbjct 2078 TACCCCTCTTCTGTCAATCATTACTAGAGATGGGCACGCAAGATTTGACTTTTGTACAAC 2137
Query 2253 TTAATCAGTTGATTGGAAGGAAA-ACGGGAGGGATATCAGTTTATCCCCTTACATCATCA 2311
|||||||||| |||||||| ||| || ||||||||||||||||||||||||||||| ||
Sbjct 2138 TTAATCAGTTAATTGGAAG-AAAGACAGGAGGGATATCAGTTTATCCCCTTACATCCTCT 2196
Query 2312 GTG-AGGGGTAAGGATGAACCATGCAGCAAAATTATCATACGCGGAAAATCCATGGCTGG 2370
||| | || || |||||| ||||| |||||||| || | || ||||||||||||| |||
Sbjct 2197 GTGTATGG-TAGGGATGATCCATGTAGCAAAATCATTGTGCGTGGAAAATCCATGGTTGG 2255
Query 2371 GCGTGCTGACGACCTTTTTAACCTGATGAATTGCT-TGTTGCAAGAGGTTCAATTTACAG 2429
|| ||||| |||||||| || ||||||| || | || |||||||||||| |||||| |
Sbjct 2256 ACGCGCTGAAGACCTTTTCAATTTGATGAACTG-TGTGCTGCAAGAGGTTCGATTTACCG 2314
Query 2430 ATCAGCAGAGGTTTAAACAGTTTGTCTCTCAAAGCAGAGCACGGATGGAGAACCGATTGA 2489
|||| ||| |||||||||| || || ||||| || |||||||| ||||||||||||||||
Sbjct 2315 ATCAACAGCGGTTTAAACAATTCGTTTCTCAGAGTAGAGCACGAATGGAGAACCGATTGA 2374
Query 2490 GGGGAAGTGGTCATGGAATTGCTGCGGCGAGAATGGATGCAATGTTGAACATTGCTGGAT 2549
||||||||||||| ||||||||||| ||||| |||||||||||||||||| |||||||||
Sbjct 2375 GGGGAAGTGGTCAAGGAATTGCTGCTGCGAGGATGGATGCAATGTTGAACGTTGCTGGAT 2434
Query 2550 GGATGTCTGAACAGATGGGTGGTCTCAGCTATCTTGAATTTTTACATACTCTTGAAAAGA 2609
|||||||||||||||||||||||||||| || ||||||||| |||| ||||||||| |||
Sbjct 2435 GGATGTCTGAACAGATGGGTGGTCTCAGTTACCTTGAATTTCTACACACTCTTGAACAGA 2494
Query 2610 AAGTGGATGAAGACTGGGAAGGAATTTCATCCTCACTTGAGGAGATCAGAAGATCTCTCC 2669
| |||||| |||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct 2495 AGGTGGATCAAGACTGGGAAGGAATTTCATCCTCACTTGAGGAAATCAGAAGATCTTTCC 2554
Query 2670 TTGCCAGGAATGGTTGCATAGTTAACATGACTGCTGATGGGAAGTCTCTCACCAACGTCG 2729
|| |||||||||||||||||||||| |||||||||||||||||||| ||||| ||| ||
Sbjct 2555 TTTCCAGGAATGGTTGCATAGTTAATATGACTGCTGATGGGAAGTCCCTCACAAACA-CG 2613
Query 2730 -AAAAATCTGTTGCGAAA-TTTCTAGATTTACTCCCTGAGAACCCCTCCGGTGGGCTGGT 2787
|||||| ||||| |||| ||||| |||||||||||||| || || || |||| || ||
Sbjct 2614 GAAAAATATGTTG-GAAAATTTCTTGATTTACTCCCTGAAAATCCGTCTGGTGAACTCGT 2672
Query 2788 CACTTGGGATGGTCGACTTCCTCTCAGAAATGAAGCAATTGTGATACCAACCCAGGTAAA 2847
||||||||||| |||||||||| | ||||||||||| || || |||||||||||||| ||
Sbjct 2673 CACTTGGGATGCTCGACTTCCTTTGAGAAATGAAGCTATAGTAATACCAACCCAGGTGAA 2732
Query 2848 CTATGTTGGAAAAGCGGGTAACATATACAGCACCGGGTATGAGCTTGATGGCAGTGCATA 2907
|||||| ||||||||||| || |||||||||| || || | |||||||| ||| ||||
Sbjct 2733 CTATGTGGGAAAAGCGGGAAATATATACAGCAGTGGCTACAAACTTGATGGGAGTTCATA 2792
Query 2908 TGTTATATCAAAGCATATAAGCAATACATGGTTATGGGATCGTGTTCGTGTAAGCGGTGG 2967
|||||||||||||||||| || || ||||||||||||||||||||||||||||| |||||
Sbjct 2793 TGTTATATCAAAGCATATTAGTAACACATGGTTATGGGATCGTGTTCGTGTAAGTGGTGG 2852
Query 2968 TGCATATGGAGGTTTCTGTGATTTCGATTCGCATTCAGGAGTATTTTC-TTACTTATCTT 3026
|||||||||||||| ||||||||| ||||| ||||| ||||||||||| || ||||||||
Sbjct 2853 TGCATATGGAGGTTCCTGTGATTTTGATTCACATTCGGGAGTATTTTCGTT-CTTATCTT 2911
Query 3027 ACCGGGATCCAAACTTGTTGAAGACACTTGACATATATGATGGAACTGGAGATTTCTTAC 3086
|||| ||||| ||| | || ||||| || |||||||||||||||||||| ||||||||||
Sbjct 2912 ACCGTGATCCCAACCTATTAAAGACTCTAGACATATATGATGGAACTGGGGATTTCTTAC 2971
Query 3087 GTGGCCTTGATGTGGATCAAGAAACACTCACTAAAGCTATTATTGGCACCATCGGTGATG 3146
||||||| ||||| ||| |||| || || || ||||| |||||||| || || || ||||
Sbjct 2972 GTGGCCTCGATGTCGATGAAGACACCCTTACCAAAGCAATTATTGGGACAATTGGCGATG 3031
Query 3147 TTGATTCATACCAATTACCTGATGCCAAAGGTTATAGCAGTTTGTTGAGGCATTTACTCG 3206
| |||||||||||| | ||||||||||||||||||| |||||||||||||||||||||
Sbjct 3032 TCGATTCATACCAACTCCCTGATGCCAAAGGTTATACCAGTTTGTTGAGGCATTTACTTA 3091
Query 3207 GA-GTAACTGACGAAGA-ACGACAAAGAAAGCGTGAAGAGATACTAACAACAAGTTTGAA 3264
| ||||| |||||||| | | |||| || ||||||||||||| || | |||||||||||
Sbjct 3092 -ATGTAACCGACGAAGAGAGG-CAAATAAGGCGTGAAGAGATATTATCTACAAGTTTGAA 3149
Query 3265 GGACTTCAAGGATTTCGCAGAAGCAATAGA-TGCGGTTAGAGATAATGGTGTTGCGGTGG 3323
|||||||||||| |||||||| |||||||| | | ||||| ||||| || ||||| ||||
Sbjct 3150 GGACTTCAAGGAATTCGCAGAGGCAATAGACT-CTGTTAGTGATAAAGGCGTTGCAGTGG 3208
Query 3324 CTGTGGCATCCGCA-GAAGACATTGATGCAGCAAACA-ATGAACGCTCCAACTTTTTCGA 3381
| |||||||| || |||||||||||||||||||||| | |||||||| || ||||||||
Sbjct 3209 CCGTGGCATCA-CAAGAAGACATTGATGCAGCAAACAGA-GAACGCTCAAATTTTTTCGA 3266
Query 3382 GGTGAAGAAAGC 3393
||||||||||||
Sbjct 3267 GGTGAAGAAAGC 3278
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 175383632728
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5