BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479442 Length=1627 Score E Sequences producing significant alignments: (Bits) Value AT3G19270.1 | Symbols: CYP707A4 | cytochrome P450, family 707, ... 2355 0.0 > AT3G19270.1 | Symbols: CYP707A4 | cytochrome P450, family 707, subfamily A, polypeptide 4 | chr3:6673727-6676520 REVERSE LENGTH=1685 Length=1685 Score = 2355 bits (1275), Expect = 0.0 Identities = 1426/1497 (95%), Gaps = 17/1497 (1%) Strand=Plus/Plus Query 69 TAATAATCGATGGCTGAAATTTGGTTATTGGTTGTACCAAGCCTCATTTTTTGCTTGCTT 128 |||||||||||||||||||||||||| ||||||||||||| |||||| || ||||||||| Sbjct 112 TAATAATCGATGGCTGAAATTTGGTTCTTGGTTGTACCAATCCTCATCTTATGCTTGCTT 171 Query 129 TTGGTAAGAGTGATTGTTTCAAAGAAGAATAAGAACAGTAGAGGTAAGCTTCCTCCTGGT 188 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 172 TTGGTAAGAGTGATTGTTTCAAAGAAGAAAAAGAACAGTAGAGGTAAGCTTCCTCCTGGT 231 Query 189 TCCATGGGATGGCCTTACTTAGGAGAGACTCTACAACTCTATTCACAAAACCCCAATGTT 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 232 TCCATGGGATGGCCTTACTTAGGAGAGACTCTACAACTCTATTCACAAAACCCCAATGTT 291 Query 249 TTCTTTACCTCCAAGCAAAAGAGATATGGAGAGATATTCAAAACCCGAATCCTCGGCTAT 308 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 292 TTCTTCACCTCCAAGCAAAAGAGATATGGAGAGATATTCAAAACCCGAATCCTCGGCTAT 351 Query 309 CCATGCGTGATGTTGGCTAGCCCTGAGGCTGCGAGGTTTGTCCTTGTGACTCATGCCCAT 368 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 352 CCATGCGTGATGTTGGCTAGCCCTGAGGCTGCGAGGTTTGTACTTGTGACTCATGCCCAT 411 Query 369 ATGTTCAAACCAACTTATCCGAGAAGCAAAGAGAAGCTGATAGGACCCTCTGCACTCTTT 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 412 ATGTTCAAACCAACTTATCCGAGAAGCAAAGAGAAGCTGATAGGACCCTCTGCACTCTTT 471 Query 429 TTTCACCAAGGAGATTATCATTCCCATATAAGGAAACTTGTTCAATCTTCTTTATACCCT 488 || |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| Sbjct 472 TTCCACCAAGGAGATTATCATTCCCATATAAGGAAACTTGTTCAATCCTCTTTCTACCCT 531 Query 489 GAAACCATCCGTAAACTCATCCCTGATATCGAGCACATTGCCCTTTCTTCCTTACAATCT 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 532 GAAACCATCCGTAAACTCATCCCTGATATCGAGCACATTGCCCTTTCTTCCTTACAATCT 591 Query 549 TGGGCCAATATGCATATTGTCTCTACCTACCAGGAGATGAAGAAGTTTGCGTTCGATGTG 608 ||||||||||||| |||||||| ||||||||||||||||||||||| || || |||||| Sbjct 592 TGGGCCAATATGCCGATTGTCTCCACCTACCAGGAGATGAAGAAGTTCGCCTTTGATGTG 651 Query 609 GGTATTCTAGCCATTTTTGGGCATTTGGAGTGTTCTTACAAAGAGATCTTGAAACATAAT 668 |||||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 652 GGTATTCTAGCCATATTTGGACATTTGGAGAGTTCTTACAAAGAGATCTTGAAACATAAC 711 Query 669 TACAATATTGTGGACAAAGGCTACAACTCTTTTCCCATGAGTATCCCCGGAACATCTTAT 728 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 712 TACAATATTGTGGACAAAGGCTACAACTCTTTCCCCATGAGTCTCCCCGGAACATCTTAT 771 Query 729 CACAAAGCTCTCATGGCGAGAAAGCGGCTAAAGACGATAGTAAGCGAGATTATACGCGTA 788 ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| | Sbjct 772 CACAAAGCTCTCATGGCGAGAAAGCAGCTAAAGACGATAGTAAGCGAGATTATATGCGAA 831 Query 789 AGAAGAGAGAAAAGGGTCTTGCAAACGGACTTTCTCGGTCATCTGCTCAACTTCAAGGAC 848 |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||| || Sbjct 832 AGAAGAGAGAAAAGGGCCTTGCAAACGGACTTTCTTGGTCATCTACTCAACTTCAAGAAC 891 Query 849 GAAAAAGGTCGTGTTCTAACCCAAGAACAGATTGCAGACAACATCATCGGAGTCCTTTTC 908 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 892 GAAAAAGGTCGTGTGCTAACCCAAGAACAGATTGCAGACAACATCATCGGAGTCCTTTTC 951 Query 909 GCCGCACAAGACACGACAGCTAGTTGCTTAACTTGGATTCTTAAGTACTTACATGATGAT 968 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 952 GCCGCACAGGACACGACAGCTAGTTGCTTAACTTGGATTCTTAAGTACTTACATGATGAT 1011 Query 969 CAGAAGCTTCTAGAGGCTGTTAAGGCTGAGCAAAGGGCAATATATGAAGAAAACAGTAGA 1028 ||||| |||||||| ||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 1012 CAGAAACTTCTAGAAGCTGTTAAGGCTGAGCAAAAGGCTATATATGAAGAAAACAGTAGA 1071 Query 1029 GAGAAGAAATCTTTAACATGGGGACAAACGAGGAATATGCCACTAACACATAAGGTTATA 1088 ||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||||| Sbjct 1072 GAGAAGAAACCTTTAACATGGAGACAAACGAGGAATATGCCACTGACACATAAGGTTATA 1131 Query 1089 GTTGAAAGCTTGAGGATGGCAAGCATCATATCCTTCACATTCAGAGAAGCAGTGGTTGAT 1148 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1132 GTTGAAAGCTTGAGGATGGCAAGCATCATATCCTTCACATTCAGAGAAGCAGTGGTTGAT 1191 Query 1149 GTTGAATATAAGGGATATTTGATACCTAAGGGATGGAAAGTGATGCCACTATTTCGGAAT 1208 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1192 GTTGAATATAAGGGATATTTGATACCTAAGGGATGGAAAGTGATGCCACTGTTTCGGAAT 1251 Query 1209 ATTCATCACAATCCGAAATATTTTTCAAACCCTGAGGTTTTCGATCCATCTAGATTTGAG 1268 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 1252 ATTCATCACAATCCGAAATATTTTTCAAACCCTGAGGTTTTCGACCCATCTAGATTCGAG 1311 Query 1269 GTGAATCCGAAGCCGAATACATTCATGCCATTTGGAAGTGGAGTTCATGCTTGTCCCGGG 1328 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1312 GTAAATCCGAAGCCGAATACATTCATGCCTTTTGGAAGTGGAGTTCATGCTTGTCCCGGG 1371 Query 1329 AACGAACTCGCCAAGTTACAGATTCTTATATTTCTCCACCATTTAACTTCCAATTTCCGA 1388 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| Sbjct 1372 AACGAACTCGCCAAGTTACAAATTCTTATATTTCTCCACCATTTAGTTTCCAATTTCCGA 1431 Query 1389 TGGGAAGTGAAGGGAGGCGAGAAAGGAATACAGTACAGTCCATTTCCGATACCTCAAGAC 1448 ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| || Sbjct 1432 TGGGAAGTGAAGGGAGGAGAGAAAGGAATACAGTACAGTCCATTTCCAATACCTCAAAAC 1491 Query 1449 GGTCTTCCCGCTACATTTCGTCGACATTCTCTTTAGTTCTTTAGTTAAACCATCAAAGTC 1508 ||||||||||||||||||||||||||||||||||||||| ||| || || | | Sbjct 1492 GGTCTTCCCGCTACATTTCGTCGACATTCTCTTTAGTTCCTTA---AA-CC-T-----T- 1540 Query 1509 TATTACTAATCTTTGTCT-TAATTAGCCAAAAT-TAATCTAAATTCGAT-Taaaaaa 1562 | | | |||||||||| | || ||||||||| | ||||| ||||||||| ||||||| Sbjct 1541 TGT-AGTAATCTTTGT-TGTAGTTAGCCAAA-TCTAATCCAAATTCGATATAAAAAA 1594 Score = 75.0 bits (40), Expect = 2e-12 Identities = 40/40 (100%), Gaps = 0/40 (0%) Strand=Plus/Plus Query 1588 ACATGTAACAACTATGATGAAGTAAAATGTCGATTCCGGT 1627 |||||||||||||||||||||||||||||||||||||||| Sbjct 1646 ACATGTAACAACTATGATGAAGTAAAATGTCGATTCCGGT 1685 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 80371072545 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5