BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479443 Length=1732 Score E Sequences producing significant alignments: (Bits) Value AT3G19280.1 | Symbols: FUT11, ATFUT11, FUCT1, FUCTA | fucosyltr... 2575 0.0 AT1G49710.1 | Symbols: FUT12, ATFUT12, FUCTB, FUCT2 | fucosyltr... 1059 0.0 > AT3G19280.1 | Symbols: FUT11, ATFUT11, FUCT1, FUCTA | fucosyltransferase 11 | chr3:6681196-6683892 REVERSE LENGTH=1810 Length=1810 Score = 2575 bits (1394), Expect = 0.0 Identities = 1630/1740 (94%), Gaps = 31/1740 (2%) Strand=Plus/Plus Query 19 AAATCGTCGCTTTGTTAATGGGTGTTTTCTCCAATCTCCGAGGTCCTAAAATTGGATCGA 78 |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||| || Sbjct 75 AAATCGTCGCTTTGATAATGGGTGTTTTCTCCAATCTTCGAGGTCCTAAAATTGGATTGA 134 Query 79 CCCATGAAGAATTGCC--T-GTAGCCAATGG--CT-CTTCTTCTTCTTCGTCTACTTCCT 132 |||||||||||||||| | ||||||||||| || ||||||||||||||||| |||||| Sbjct 135 CCCATGAAGAATTGCCTGTAGTAGCCAATGGCTCTACTTCTTCTTCTTCGTCTCCTTCCT 194 Query 133 CTTTCAAGCGTAAAGTCTCGACCTTTTTGCCAATCTGCGTGGCTCTGGTTATCATCATCG 192 |||||||||||||||||||||||||||||||||||||||||||||| || |||| |||| Sbjct 195 CTTTCAAGCGTAAAGTCTCGACCTTTTTGCCAATCTGCGTGGCTCTTGTCGTCATTATCG 254 Query 193 AGATCGGGTTCCTGTGTCGGCTCGATAACGCTCCTTTGGTCGATACGTTGACCCATTTTT 252 ||||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 255 AGATCGGGTTCCTCTGTCGGCTCGATAACGCTTCTTTGGTCGATACGTTAACCCATTTTT 314 Query 253 TCACCAAGTCGTCGTCCGATTTGAAAGTTGGGTCGGGAATGGAGAAATGCCAGGAGTGGT 312 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 315 TCACCAAGTCGTCGTCCGATTTGAAAGTTGGGTCAGGAATAGAGAAATGCCAGGAGTGGT 374 Query 313 TAGAGAGAGTGGACTCAGTGACTTATTCTAGAGATTTCAGTAAAAATCCAATCTTTATCG 372 ||||||||||||| ||||| ||||||||||||||||||| |||| |||| || |||||| Sbjct 375 TAGAGAGAGTGGATTCAGTTACTTATTCTAGAGATTTCACTAAAGATCCGATTTTTATCT 434 Query 373 CTGGTAGTAACAAGGACTTCGAATCGTGTTCTGTTGATTGTGTTATGGGATTCAGTTCAG 432 |||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||| Sbjct 435 CTGGTAGTAACAAGGACTTCAAATCGTGCTCTGTTGATTGTGTAATGGGATTCACTTCAG 494 Query 433 ATAAGAAACCCGATGCGGCGTTTGGATTAAGTCATCAACCTGGAACACTCAGTATAATCC 492 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 495 ATAAGAAACCTGATGCGGCTTTTGGATTAAGTCATCAACCTGGAACACTCAGTATAATCC 554 Query 493 GTTCCATGGAATCGGCACAGTACTATCAAGAGAACAATCTTGCTCAAGCACGACGGAGGG 552 ||||||||||||| |||||||| || |||||||| |||||||||||||||||||||| | Sbjct 555 GTTCCATGGAATCAGCACAGTATTACCAAGAGAATAATCTTGCTCAAGCACGACGGAAAG 614 Query 553 GTTATGATGTTGTGATGACAACTAGTCTGTCATCAGATGTTCCTGTTGGGTATTTTTCAT 612 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 615 GTTATGATATTGTGATGACAACTAGTCTGTCATCAGATGTTCCTGTTGGGTATTTTTCAT 674 Query 613 GGGCGGAATATGATATTATGGCTCCAGTGCATCCAAAGACCGAGAAAGCTCTTGCTGCTG 672 ||||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct 675 GGGCGGAATATGATATTATGGCTCCAGTGCAACCAAAAACAGAGAAAGCTCTTGCTGCTG 734 Query 673 CTTTTATATCCAATTGTGCGGCTCGGAATTTCCGCCTGCAAGCTCTTGAAGCCTTAATGG 732 ||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 735 CTTTTATTTCCAATTGCGCCGCTCGGAATTTCCGCCTGCAAGCTCTTGAAGCCTTAATGA 794 Query 733 AGGCGAATGTTAAGATTGATTCTTATGGTGGTTGTCACCGGAATCGGGATGGGAGTGTGG 792 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 795 AGACGAATGTTAAGATTGATTCTTATGGTGGTTGTCACCGGAATCGGGATGGGAGTGTGG 854 Query 793 AGAAGGTTGAAGCTCTTAAGCACTACAAATTCAGTCTAGCTTTTGAGAACACCAACGAGG 852 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 855 AGAAGGTTGAAGCTCTTAAGCACTACAAATTCAGTCTAGCTTTTGAGAACACCAACGAGG 914 Query 853 AGGACTACGTCACAGAGAAGTTCTTCCAATCTCTAGTTGCTGGATCTGTCCCTGTGGTTG 912 |||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 915 AGGATTATGTCACAGAGAAGTTCTTCCAATCTCTAGTCGCTGGATCTGTCCCTGTGGTTG 974 Query 913 TTGGAGCTCCAAATATAGAAGAATTTGCACCTTCTCCTGACTCATTCCTTCACATTAAGC 972 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 975 TTGGAGCTCCAAATATAGAAGAATTTGCACCTTCTCCTGACTCATTCCTTCACATTAAGC 1034 Query 973 AGATGGATGATGTCAAGGCAGTTGCAAAGAAAATGAAGTATCTTGCGGATAACCCTGACG 1032 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1035 AGATGGATGATGTCAAGGCAGTTGCAAAGAAAATGAAGTATCTTGCGGATAACCCTGACG 1094 Query 1033 CCTATACTCAGACGCTAAGATGGAAACACGAAGGCCCTTCAGATTCTTTTAAGGCACTTA 1092 |||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 1095 CCTATAATCAGACGCTAAGATGGAAACATGAAGGCCCTTCAGATTCTTTTAAGGCACTTA 1154 Query 1093 TTGATATGGCTGATGTACACTCTTCTTGTCGTCTCTGCATCTTTGTGGCTACAAGGATTC 1152 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1155 TTGATATGGCTGCTGTACACTCTTCTTGTCGTCTCTGCATCTTTGTGGCTACAAGGATTC 1214 Query 1153 GTGAGCAAGAAGAGAAGAGCCCTGAGTTTAAGAGACGACCCTGCAAATGCAGCAGGGGCT 1212 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct 1215 GTGAGCAAGAAGAGAAGAGCCCTGAGTTTAAGAGACGACCCTGCAAATGCACCAGAGGCT 1274 Query 1213 CACAGACAGTTTATCATTTGTATGTTAGAGAAAGAGGACGGTTTGACATGGAATCCATCT 1272 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1275 CAGAGACAGTTTATCATTTGTATGTTAGAGAAAGAGGACGGTTTGACATGGAATCCATCT 1334 Query 1273 TCTTGAACGATGGAAATCTGACTCCGGAAGCTCTGAAATCTGCAGTTCTTGCAAAGTTCA 1332 ||||||| |||||||||||||||| |||||||||| ||||||| |||||||| ||||||| Sbjct 1335 TCTTGAAGGATGGAAATCTGACTCTGGAAGCTCTGGAATCTGCGGTTCTTGCGAAGTTCA 1394 Query 1333 AGTCTCTGAGACATGAACCGATATGGAAGAAGGAAAGACCCGCGACCTTAAGAGGAGATG 1392 |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| | Sbjct 1395 TGTCTCTGAGATATGAACCAATATGGAAGAAGGAAAGACCCGCGAGCTTAAGAGGAGACG 1454 Query 1393 GTGAGCTTAGAGTACATGGGATATATCCGCTTGGTCTGACTCAAAGACAAGCCCTTTACA 1452 | ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| Sbjct 1455 GCAAGCTTAGAGTACATGGGATATATCCTATTGGTCTGACTCAAAGACAAGCTCTTTACA 1514 Query 1453 ACTTCAAATTCGAAGGAAATTCAAGTCTCAGTACTCACATACAGAGAAACCCTTGTTCCA 1512 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1515 ACTTCAAATTCGAAGGAAATTCAAGTCTCAGTACTCACATACAGAGAAACCCTTGTCCCA 1574 Query 1513 AATTCGAAGTTGTCTTTGTCTAAATTCTAGAAGAAAACCAAAGTTTACTTTGTGATGCAC 1572 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1575 AATTCGAAGTTGTCTTTGTCTAAATTCTAGAAGAAAACCAAAGTTTATTTTGTGATACAT 1634 Query 1573 GCTTTGAATGTAGTTTGTTTTAGGCAGGA-TTAAGGAACGAGTACATATAAAAATAAAAA 1631 ||||||| |||||||||| |||||||||| |||||||| | |||||||||||||||||| Sbjct 1635 GCTTTGAGTGTAGTTTGTCTTAGGCAGGAATTAAGGAATGTGTACATATAAAAATAAAAG 1694 Query 1632 CAGATTTTGCTTCTCTTATTGGGT--T-CAA-G-A-ATA-GTT----TG-A-T--GA-AA 1675 || |||||||| ||||||||||| | ||| | | ||| ||| || | | || || Sbjct 1695 -AGTTTTTGCTTGTCTTATTGGGTACTACAATGCACATATGTTCAAGTGTAGTTTGATAA 1753 Query 1676 --CACAAAATGGCTAATTAAACATTCTCAG-TTCAGCTTTAACAGATTTACAGATACTGC 1732 ||||||||| | | || ||||||||| || |||||||||||||||||||||||||| Sbjct 1754 AACACAAAATGAC-AC--AAGCATTCTCAGATT-AGCTTTAACAGATTTACAGATACTGC 1809 > AT1G49710.1 | Symbols: FUT12, ATFUT12, FUCTB, FUCT2 | fucosyltransferase 12 | chr1:18391338-18393947 REVERSE LENGTH=2004 Length=2004 Score = 1059 bits (573), Expect = 0.0 Identities = 1041/1262 (82%), Gaps = 51/1262 (4%) Strand=Plus/Plus Query 300 TGCCAGGAGTGGTTAGA-GAGAGTGGACTCAGTGACTTATTCTAGAGATTTCAGTAAAAA 358 ||| |||||||||| || ||||| || ||||| ||||| ||||||||||| | |||| | Sbjct 482 TGCGAGGAGTGGTT-GATGAGAGAAGATTCAGTTACTTACTCTAGAGATTTTACTAAAGA 540 Query 359 TCCAATCTTTATCGCTGGTAGT-AACAAGGAC-TTCGAATCGTGTTCTGTTGATTGT--G 414 |||||| |||||| ||||| || || |||||| ||| ||| ||||||||| |||||| Sbjct 541 TCCAATTTTTATCTCTGGTGGTGAA-AAGGACTTTC-AATGGTGTTCTGTGGATTGTACA 598 Query 415 TTATGG-GATTCAGTTCAGATAAGAA-ACCCGATGCGGCGTTTGGATTAAGTCATCAACC 472 || ||| || | ||||||| || || ||| ||||| |||||||||||| |||| |||| Sbjct 599 TT-TGGAGA-T-AGTTCAGGGAA-AACACCAGATGCTGCGTTTGGATTAGGTCAGAAACC 654 Query 473 TGGAACACTCAGTATAATCCGTTCCATGGAATCGGCACAGTACTATCAAGAGAACAATCT 532 |||||| || |||||||| |||||||||||||| |||||||| |||| ||| || |||| Sbjct 655 TGGAACTCTTAGTATAATACGTTCCATGGAATCAGCACAGTATTATCCAGAAAATGATCT 714 Query 533 TGCTCAAGCACGACGGAGGGGTTATGATGTTGTGATGACAACTAGTCTGTCATCAGATGT 592 ||| || ||||||||||| ||||||||| | |||||||| |||||||| ||||||||||| Sbjct 715 TGCACAGGCACGACGGAGAGGTTATGATATAGTGATGACCACTAGTCTATCATCAGATGT 774 Query 593 TCCTGTTGGGTATTTTTCATGGGCGGAATATGATATTATGGCTCCAGTGCATCCAAAGAC 652 ||||||||| |||||||| |||||||| |||||||||||| |||| || || ||||| || Sbjct 775 TCCTGTTGGATATTTTTCGTGGGCGGAGTATGATATTATGTCTCCGGTACAGCCAAAAAC 834 Query 653 CGAGAAAGCTCTTGCTGCTGCTTTTATATCCAATTGTGCG-GCTCGGAATTTCCGCCTGC 711 |||| |||| |||| ||||||||||| || ||||||| | ||||||||||| || || | Sbjct 835 TGAGAGAGCTATTGCAGCTGCTTTTATTTCTAATTGTG-GTGCTCGGAATTTTCGTCTAC 893 Query 712 AAGCTCTTGAAGCCTTAATGGAGGCGAATGTTAAGATTGATTCTTATGGTGGTTGTCACC 771 |||| ||||| || || ||| | | || |||||||||||||||||||||||||||| | Sbjct 894 AAGCACTTGAGGCATTGATGAAAACTAACATTAAGATTGATTCTTATGGTGGTTGTCATC 953 Query 772 GGAATCGGGATGGGAGTGTGGAGAAGGTTGAAGCTCTTAAGC-ACTACAAATTCAGTCTA 830 | || |||||||||| || || ||||||||||||||||||| | |||||||||||| | Sbjct 954 GAAACCGGGATGGGAAAGTTGACAAGGTTGAAGCTCTTAAGCGA-TACAAATTCAGTTTG 1012 Query 831 GCTTTTGAGAACACCAACGAGGAGGACTACGTCACAGAGAAGTTCTTCCAAT-CTCTAGT 889 ||||||||||| || |||||||| || || ||||| ||||||||||| |||| || |||| Sbjct 1013 GCTTTTGAGAATACTAACGAGGAAGATTATGTCACCGAGAAGTTCTTTCAATCCT-TAGT 1071 Query 890 TGCTGGATCTGTCCCTGTGGTTGTTGGAGCTCCAAATATAGAAGAATTTGCACCTTCTCC 949 |||||| || ||||| ||||| ||||| |||||||||||||||||||||| ||| || | Sbjct 1072 TGCTGGGTCCGTCCCCGTGGTAGTTGGTCCTCCAAATATAGAAGAATTTGCGCCTGCTTC 1131 Query 950 TGACTCATTCCTTCACATTAAG-CAGATGGATGATGTCA-AGGCAGTTGCAAAGAAAATG 1007 ||||||||||||||||||||| | ||||| ||||| | || |||||||||||| |||| Sbjct 1132 GGACTCATTCCTTCACATTAAGACT-ATGGAAGATGT-AGAGCCAGTTGCAAAGAGAATG 1189 Query 1008 AAGTATCTTGCGGATAACCCTGAC-GCCTATACTCAGACGCTAAGATGGAAACACGAAGG 1066 |||||||| || | |||||||| | || |||| |||||| |||||||||||| |||| || Sbjct 1190 AAGTATCTCGCAGCTAACCCTG-CTGCTTATAATCAGACACTAAGATGGAAATACGAGGG 1248 Query 1067 CCCTTCAGATTCTTTTAAGGCACTTATTGATATGGCTGATGTACACTCTTCTTGTCGTCT 1126 |||||||||||||| ||||||||| |||||||||||| ||||||||||||||| ||||| Sbjct 1249 TCCTTCAGATTCTTTCAAGGCACTTGTTGATATGGCTGCTGTACACTCTTCTTGCCGTCT 1308 Query 1127 CTGCATCTTTG-TGGCTACAAGGATTCGTGAGCAAGAAGAG-AAGAGCCCTGAGTTT-AA 1183 |||||| ||| |||| || ||| | || || ||||||||| || |||||| | ||| || Sbjct 1309 CTGCAT-TTTCCTGGCCACGAGGGTCCGAGAACAAGAAGAGGAA-AGCCCTAA-TTTCAA 1365 Query 1184 GAGACGACCCTGCAAATGCAGCAGGGGCTCA-CAGACA--GTTTATCAT-TTGTATGTTA 1239 || |||||| |||||||| |||||||| | |||||| ||||||||| || | ||||| Sbjct 1366 GAAACGACCGTGCAAATGTAGCAGGGGAGGATCAGACACAGTTTATCATGTTTT-TGTTA 1424 Query 1240 GAGAAAGAGGACGGTTTGACATGGAATCCA-TCTTCTTGAACGATGGAAA-TCTGACTCC 1297 |||||||||| |||||||| |||||||| | |||| |||| | | ||| | |||||| Sbjct 1425 GAGAAAGAGGCCGGTTTGAAATGGAATC-AGTCTTTTTGAGGGGTA-AAAGTGTGACTCA 1482 Query 1298 GGAAGCTCT-GAAATCTGCAGTTCTTGCAAAGTTCAAGTCTCTGAGACATGAACC-GATA 1355 ||||||||| ||| ||||||||||| || |||||||||||| | | |||||| | | | Sbjct 1483 GGAAGCTCTAGAA-TCTGCAGTTCTCGCCAAGTTCAAGTCTTTAAAACATGAGGCAG-TG 1540 Query 1356 TGGAAGAAGGAAAGACCCGCGAC-CTTAAGAGGAGATGGTGAGCTTAGAGTACATGGGAT 1414 |||||||||||||| || | || ||||| |||||| ||||||| | ||||| |||| Sbjct 1541 TGGAAGAAGGAAAGGCCTG-GAAACTTAAAAGGAGACAAAGAGCTTAAAATACATCGGAT 1599 Query 1415 ATATCCGCTTGGTCTGACTCAAAGACAAGCCCTT-TACAACTTCAAATTCGAAGGAAATT 1473 || |||||||| || || ||| |||| || || ||||||||||||||||| ||||||| Sbjct 1600 TTACCCGCTTGGCCTAACGCAACGACAGGCT-TTGTACAACTTCAAATTCGAGGGAAATT 1658 Query 1474 CAAGTCTCAGTACTCACATACAGAGA-AACCCTTGTTCCAAATTCGAAGTTGTCTTTGTC 1532 | ||||| |||| |||||| || | | ||||||||| | ||||| || |||||||| ||| Sbjct 1659 CGAGTCTAAGTAGTCACATTCAAA-ACAACCCTTGTGCTAAATTTGAGGTTGTCTTCGTC 1717 Query 1533 TA 1534 || Sbjct 1718 TA 1719 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 85642129770 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5