BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479605 Length=1234 Score E Sequences producing significant alignments: (Bits) Value AT3G20790.1 | Symbols: | NAD(P)-binding Rossmann-fold superfam... 1757 0.0 AT3G20800.1 | Symbols: | Cell differentiation, Rcd1-like prote... 172 6e-42 > AT3G20790.1 | Symbols: | NAD(P)-binding Rossmann-fold superfamily protein | chr3:7268752-7271287 FORWARD LENGTH=1306 Length=1306 Score = 1757 bits (951), Expect = 0.0 Identities = 1154/1245 (93%), Gaps = 41/1245 (3%) Strand=Plus/Plus Query 11 CTTCACCAGGAATTGCCATTCTCGGAGCTGGGATCTTCGTCAAAACGCAATATATTCCGA 70 ||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||||||| Sbjct 64 CTTCACCTGGAATTGCCATACTCGGAGCTGGGATCTTCGTCAAAACTCAATACATTCCGA 123 Query 71 GATTGGCTGAGATCTCCGATCTCGTCGTCCTGAAAGCGATTTGGAGCCGTACTGAGGAAT 130 |||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 124 GATTAGCTGAGATCTCCGATCTCGTCGACCTGAAAGCGATTTGGAGCCGTACTGAGGAAT 183 Query 131 CTGCAAAAGGAGCTGTGGAGATAGCAAGAAAGCATTTTCCAGAAGTGAAGTGCAAATGGG 190 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 184 CTGCAAAAGGAGCTGTGGAGATAGCAAGAAAGCATTTTCCTGAAGTGAAGTGCAAATGGG 243 Query 191 GAGATGATGGTCTCAATGAGATCATTCAAGATAGTTCAATAGTTGGTGTTGCTGTTGTTG 250 ||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 244 GAGATGAGGGTCTCAATGAGATCATTCAAGACAGTTCAATAGTTGGTGTTGCTGTAGTTG 303 Query 251 TAGCTGCAGAAACCATGGTTGAAATGTCACTGAAGATGCTCAAGGCAGGAAAACACGTCC 310 ||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||| Sbjct 304 TAGCTGCAGAAACCATGGTTGAATTGTCACTGAAGATGCTCAAGGCAGGAAAGCACGTCC 363 Query 311 TTCAAGAGAAGCCAGCTGCTGCCTCAATCAGTGAGCTAGAAACTGCAATGTCAAGCTATA 370 |||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| Sbjct 364 TTCAAGAGAAGCCAGCTGCTGCTTCAATCAGTGAGATAGAAACTGCAATGTCAAGCTATA 423 Query 371 GAAATATTTCTGCTGATTCCCCATGCCGTCCAATCTGGGCAGTGGCTGAAAATTATCGTT 430 |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 424 GAAATATTTCTGCTGATTCCCCATGCCGTCCAATTTGGGCTGTGGCTGAAAATTATCGTT 483 Query 431 TTGAGCCAGCTTTTGTTGAGTTGAAGAAACTGATAGCAGAAACTGGTGATATGATGAACG 490 |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 484 TTGAGCCAGCTTTTGTTGAGTTGAAGAAACTGATAGCAGAAATTGGAGATATGATGAACG 543 Query 491 TCCAGCTTATTATTGAGGGATCAATGAACAGTTCGAATCCTTATTTCTCAAGCTCGTGGA 550 |||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||| Sbjct 544 TCCAGCTTATTATTGAGGGATCAATGAACAGTTCTAATCCTTATTTCTCAAGCTCCTGGA 603 Query 551 GGCGAAATTTGAGCGGTGGTTTCATCTTGGATATGGGTGTGCATTACATTGCAGGGTTAA 610 ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 604 GGCGAAATTTGAGTGGTGGTTTCATCTTGGATATGGGTGTACATTACATTGCAGGATTAA 663 Query 611 GAATGCTTGTTGGATGTGAGGTAGCATCAGTCTCTGCCACCACTTCCCATGTGGATAAGA 670 ||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||| Sbjct 664 GAATGCTTGTTGGATGTGAGGTAACATCAGTCTCAGCCACCACTACCCATGTGGATAAGA 723 Query 671 CTTTACCTGGACCAGACAATATAACATCAAACTTTCAGCTGGAGAACGGATGCTCTGGTG 730 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | Sbjct 724 CTTTACCTGGACCAGACAATATAACATCAAACTTTCAGCTCGAGAACGGATGCTCTGGGG 783 Query 731 TTTTTGTTATGGTTGTGTCTTCAAGATCTCCAAAGGCATGTAGTAAGACTTGGATATTAT 790 ||||||||||||||||||||||||| ||||||||| || | || | ||| Sbjct 784 TTTTTGTTATGGTTGTGTCTTCAAGGTCTCCAAAG--AT--ACTA----T-GGA------ 828 Query 791 GGAGAGTCGTAGGATTAAAAGGCACTGTTCAACTTGAGCGTGGAGTCGAAGGTGGCCGAC 850 | | | |||||||| |||| |||||||||||||| ||||||||||| ||||||||||||| Sbjct 829 G-A-A-TCGTAGGACTAAAGGGCACTGTTCAACTAGAGCGTGGAGTGGAAGGTGGCCGAC 885 Query 851 ATGGTTACATGGCCACGATTTACGGGGAAGGAGGGACATCAAGGACCATCTTTTACCCGT 910 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 886 ATGGTTACATGGCCACGATTTACGGGGAAGGAGGGACATCAAGGACCATCTTTTACCCAT 945 Query 911 TCAGCGGAGTGACTGAAGAGCTAAAAGCGTTCTTCAATGATATCTCAGAGACTTCAAAGG 970 |||||||||||||||||||| |||||||||||||||||||||| ||||| |||||||||| Sbjct 946 TCAGCGGAGTGACTGAAGAGTTAAAAGCGTTCTTCAATGATATTTCAGAAACTTCAAAGG 1005 Query 971 AGCAAGAGCCTCGTCTATCATACGTGGAAGGTGCTCGTGACGTTGCGGTTCTTGAAGCAA 1030 |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct 1006 AGCAAGAGCCTCGTCTATCATATGTGGAAGGTGCTCGTGACGTTGCAGTTCTTGAAGCAA 1065 Query 1031 TGCTCGAGTCTGGTGCGAAAAATGGAGCCGTAGTCCCTGTCACCAAATTCTAGCTTTGAA 1090 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1066 TGCTCGAGTCTGGTGCGAAAAATGGAGCCGTAGTCCCTGTCAACAAATTCTAGCTTTGAA 1125 Query 1091 CCTTTC-------C-A--AGA-T--A-C---C-GCTAAAGCTTT-GATGGAATAAAAATT 1131 ||||| | | ||| | | | | ||||||||||| | ||||||||||||| Sbjct 1126 CCTTTATTAAGTACGATTAGACTCCAACATACCGCTAAAGCTTTTGCTGGAATAAAAATT 1185 Query 1132 GTTAC-GTTTCAA-ACTGAAAATACATACTCTATAATATTTCTTTTGTAACCAATCTTTT 1189 ||||| ||| ||| | ||| |||||| ||||||||||||||||||||||||||||||||| Sbjct 1186 GTTACCGTT-CAACA-TGATAATACAAACTCTATAATATTTCTTTTGTAACCAATCTTTT 1243 Query 1190 ATTATCCCGAGACTTATGCATTCTTGGGGCTTTGTTCTAAAGCTT 1234 |||||||| ||||||||||||||| |||| || |||||| ||||| Sbjct 1244 ATTATCCCAAGACTTATGCATTCTGGGGGATTGGTTCTAGAGCTT 1288 > AT3G20800.1 | Symbols: | Cell differentiation, Rcd1-like protein | chr3:7271137-7273947 REVERSE LENGTH=1276 Length=1276 Score = 172 bits (93), Expect = 6e-42 Identities = 122/135 (90%), Gaps = 5/135 (4%) Strand=Plus/Minus Query 1103 ACCGCTAAAGC-TTTGATGGAATAAAAATTGTTA-CGTTTCAAAC-TGAAAATACATACT 1159 ||||||||||| |||| ||||||||||||||||| || ||| ||| ||| |||||| ||| Sbjct 1276 ACCGCTAAAGCTTTTGCTGGAATAAAAATTGTTACCG-TTC-AACATGATAATACAAACT 1219 Query 1160 CTATAATATTTCTTTTGTAACCAATCTTTTATTATCCCGAGACTTATGCATTCTTGGGGC 1219 |||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||| Sbjct 1218 CTATAATATTTCTTTTGTAACCAATCTTTTATTATCCCAAGACTTATGCATTCTGGGGGA 1159 Query 1220 TTTGTTCTAAAGCTT 1234 || |||||| ||||| Sbjct 1158 TTGGTTCTAGAGCTT 1144 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60642258360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5