BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479619 Length=1305 Score E Sequences producing significant alignments: (Bits) Value AT3G20920.1 | Symbols: | translocation protein-related | chr3:... 2159 0.0 > AT3G20920.1 | Symbols: | translocation protein-related | chr3:7328576-7330751 REVERSE LENGTH=1338 Length=1338 Score = 2159 bits (1169), Expect = 0.0 Identities = 1265/1311 (96%), Gaps = 7/1311 (1%) Strand=Plus/Plus Query 1 aaaaaaaCTCTCCGACTCGGAAGAAGAGGGAGAGAGATGAAGAAGCCGGTCGGAGCCGAG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 18 AAAAAAACTCTCCGACTCGGAAGAAGAGGGAGAGAGATGAAGAAGCCGGTCGGAGCCGAG 77 Query 61 AAGAAGAGGGTTAAACGATCATCGGGATCTGCATCTACCTCCGTTAGAGATTCTGGTTCT 120 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 78 AAGAAGAGGGTTAAACGATCATCGGGATCTGCATCTACTTCCGTTAGAGATTCTGGTTCT 137 Query 121 GATGCTCAACCTAGGAAGCAAGCTGTGAAGAAGGATAGTTTTCAGTTGTTTGCTGAGAAA 180 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 138 GATTCTCAACCTAGGAAGCAAGCTGTGAAGAAGGATAGTTTTCAGTTGTTTGCTGAGAAA 197 Query 181 GTTAGAGACCACAAGGGATTGGAATCCAGATGGGCTGTTATGGAGCAAGCACGAGTCGAA 240 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct 198 GTTAGAGACCACAAGGGATTAGAATCCAGATGGGCTGTTATGGAGCAAGCACGAGTTGAA 257 Query 241 TA-TTTCAGAGGGAAAGATTTTGTGAGCTTCATGAAGAATAATCCAGAGTTTAAAGAGAT 299 || ||| ||||||||||||||||||||||| ||||||||||| || || |||||||| || Sbjct 258 TACTTT-AGAGGGAAAGATTTTGTGAGCTTTATGAAGAATAACCCTGACTTTAAAGATAT 316 Query 300 TCTGGAAGAAGATAAAGACCTTGATACAGATGATATTGCCAATGTTTTGTTGGGAAAGAA 359 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 317 TCTGGAAGAAGATAAAGACCTTGACACAGACGATATTGCCAATGTTTTGTTGGGAAAGAA 376 Query 360 CCTTTTGGTTCGCTGTGATCGTGTTACAAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTC 419 ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 377 CCTTTTGGTCCGCTGTGATCGTGTTACTAAAACTCTTCGTCCCGGGAAGAAAAAGCTCTC 436 Query 420 TACTTGGCCAGCTCATTTGGAGATTTTCCGTGATGATCAATCTTTCTCTGAAAATGATGC 479 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 437 TACTTGGCCTGCTCATTTGGAGATTTTCCGTGACGATCAATCTTTCTCTGAAAATGATGC 496 Query 480 CTTTTTTGCATGGACGTTCGAAAAAAGGCATCCTCTATGGCAAACACTTTTGTCCTTCTT 539 ||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| Sbjct 497 CTTTTTTGCATGGACGTTCGAAAAACGGCATCCGCTATGGCAAACGCTTTTGTCCTTCTT 556 Query 540 CTGGCCTGTATTGACTCTTGCAATTTGTTTGTTTCCTGTGTACCCACACCGTTGCAAACT 599 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 557 CTGGCCTGTATTGACTCTTGCAATTTGTTTGTTTCCTGTGTATCCACACCGTTGCAAACT 616 Query 600 AATTGTACTCTACTCATGCGCGGGCATTCTTTTGATGATTCTCTCCTTGCTTTTCGTGAG 659 |||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||| Sbjct 617 AATTGTACTCTACTCATGTGCGGGCATTCTTCTGATGATTCTCTCCTTACTTTTCGTGAG 676 Query 660 AGCAGTTGCTTTCGGTGCTATGTGGATTCTTTTGGGAAAGCGTGTCTGGTTCTTCCCCAA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 677 AGCAGTTGCTTTCGGTGCTATGTGGATTCTTTTGGGAAAGCGTGTCTGGTTCTTCCCCAA 736 Query 720 CATTCTAGCCGAGGAAGCCACATTGAAGGAACTGTTCCGTTTCTGGCCAAAGAAAGACGA 779 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 737 CATTCTAGCTGAGGAAGCCACATTGAAGGAACTGTTCCGTTTCTGGCCAAAGAAAGACGA 796 Query 780 GGAAGAACCGCCCAAGTGGACATCTCGACTTTTCTACACAGTAGTGGCTATTGTTGTTGT 839 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 797 GGAAGAACCGCCCAAGTGGACATCTCGACTTTTCTACACAGTAGTGGCTATTGTTGTTGT 856 Query 840 CATGCTGCTTAGGCGCCATGCCCCTGATGAAGCTGCTCGGGCCAGGTACCAAAGAAGGAT 899 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 857 CATGCTGCTTAGGCGTCATGCCCCTGATGAAGCTGCTCGGGCCAGGTACCAAAGAAGGAT 916 Query 900 GTCCAACATCATTGATGATGTCCTTGAGTGGTCACCAAAGCTAGCACTATCTGGTTTAAT 959 |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 917 GTCCAACATCATTGATGATGTCCTTGAGTGGTCACCAAAGCTAGCACTTTCTGGTTTGAT 976 Query 960 GGAGAATCAGCAACCTGTGAACATCACAGATGCGGCAAACAACTCCTCAGATTCAGCAGG 1019 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 977 GGAGAATCAGCAACCTGTAAACATCACAGATGCGGCAAACAACTCCTCAGATTCAGCAGG 1036 Query 1020 T--TCC-GACCAGACTGAAGAGGTCAACCTAGACGAAACTCAAGGCGAGGACCTAGACGA 1076 ||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||| Sbjct 1037 AGGTCCCGACCAGACTGAAGAGGTCGACCTAGATGAAACTCAAGGCGAGGACCTAGACGA 1096 Query 1077 AACTCAAGGCGAGGAGGAAGCTGAAGGTTGGACTGACTCTGATCTaaaaacataaaaaaa 1136 ||| |||||| |||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1097 AACGCAAGGCAAGGAGGAAGCTGAAGGTTGGACTGACTCTGATCTTAAAACATAAAAAAA 1156 Query 1137 c-aaaaTATAGAAACGAAAGTTCATTGTAACAATAAGTCAGCTTAAGTGACCAAGACGAG 1195 | |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1157 CCAAAATATAGAAACGAAAGTTCATTGTAACAATAAGTCAACTTAAGTGACCAAGACGAG 1216 Query 1196 GTGAGTTCTT-ATAAGAAAGTCTTGAAAGATTTTGTGGTACTTCATTACTCTTTTTCAAT 1254 |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||| || | Sbjct 1217 GTGAGTTCTTTATAAGAAAGTCTTGAAAGATTTTGTGGTACTCCATTACTCCTTTACATT 1276 Query 1255 TTGACACAATCTGGAATTTAGCTCTCAATCACAGTTTTGTATTCGAAACTT 1305 |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1277 TTGACACAATCTGGAATTTAGCTCTCAATCACAGTTTTGTATTCCAAACTT 1327 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 64206497055 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5