BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg479810 Length=1342 Score E Sequences producing significant alignments: (Bits) Value AT3G23000.1 | Symbols: CIPK7, SnRK3.10, PKS7, ATSRPK1, ATSR2 | ... 2060 0.0 AT4G14580.1 | Symbols: CIPK4, SnRK3.3 | CBL-interacting protein... 634 0.0 > AT3G23000.1 | Symbols: CIPK7, SnRK3.10, PKS7, ATSRPK1, ATSR2 | CBL-interacting protein kinase 7 | chr3:8172597-8174131 FORWARD LENGTH=1535 Length=1535 Score = 2060 bits (1115), Expect = 0.0 Identities = 1250/1315 (95%), Gaps = 9/1315 (1%) Strand=Plus/Plus Query 34 CCGCCGCCATGGAATCACTTCCTCC-GCCGCAAAATCAAACATCTCCGGCAACAACTCCG 92 |||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||| Sbjct 50 CCGCCGCCATGGAATCACTTCC-CCAGCCGCAAAACCAATCATCTCCGGCAACAACTCCG 108 Query 93 GCAAAAGCT-CTCCTCGGAAAATACGAACTCGGTCGTCGACTCGGTAGCGGAAGCTTCGC 151 || ||| | ||||| || |||||||||||||||||||| |||||||||||||||||||| Sbjct 109 GC-GAAGATCCTCCTTGGGAAATACGAACTCGGTCGTCGTCTCGGTAGCGGAAGCTTCGC 167 Query 152 GAAAGTTCATCTAGCTCGATCAATCGAATCCGACGAGCTCGTCGCCATTAAAATCATCGA 211 |||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 168 GAAAGTCCATTTAGCTCGATCAATCGAATCCGACGAGCTCGTCGCCGTTAAAATCATCGA 227 Query 212 GAAGAAGAAAACAATCGAATCAGGCATGGAACCAAGAATAATCAGAGAGATCGATGCGAT 271 ||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| Sbjct 228 GAAGAAGAAAACAATCGAATCCGGTATGGAACCAAGAATAATCAGAGAGATCGATGCGAT 287 Query 272 GCGTCGTCTTCGTCATCATCCAAACATACTTAAGATCCATGAAGTTATGGCAACCAAATC 331 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 288 GCGTCGTCTTCGTCATCATCCAAACATACTCAAGATCCATGAAGTTATGGCAACCAAATC 347 Query 332 TAAGATCTATCTCGTAATGGAACTCGCTTCCGGTGGTGAACTTTTCTCTAAAGTCCTCCG 391 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 348 TAAGATCTATCTCGTAATGGAACTCGCTTCCGGTGGTGAACTTTTCTCAAAAGTCCTCCG 407 Query 392 TCGTGGTCGTCTTCCTGAATCAACGGCGCGTCGTTACTTTCAACAACTAGCCTCCGCGCT 451 |||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 408 TCGTGGACGTCTTCCTGAATCAACGGCGCGTCGTTACTTTCAACAACTCGCCTCCGCTCT 467 Query 452 TAGATTCTCTCACCAAGACGGTGTCGCTCACCGTGATGTGAAACCACAGAATCTACTCTT 511 | | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 468 TCGTTTCTCTCACCAAGACGGTGTCGCTCACCGTGATGTGAAACCTCAGAATCTACTCTT 527 Query 512 AGATCAGCAAGGTAACCTCAAGGTCTCTGACTTTGGTTTATCAGCTTTACCGGAACATCT 571 |||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 528 AGATGAGCAAGGTAACCTCAAGGTCTCTGACTTTGGTTTATCAGCTTTACCGGAGCATCT 587 Query 572 CCAAAACGGATTGCTTCACACGGCGTGTGGTACTCCGGCTTACACAGCTCCGGAGGTTAT 631 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 588 ACAAAACGGATTGCTTCACACGGCGTGTGGTACTCCGGCTTATACAGCTCCGGAGGTTAT 647 Query 632 TTCGCGGCGAGGATACGACGGAGCGAAAGCTGATGCGTGGTCTTGTGGTGTGATTTTGTT 691 ||| ||| | |||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 648 TTCACGGAGGGGATACGACGGAGCAAAAGCTGATGCGTGGTCTTGTGGTGTGATTTTGTT 707 Query 692 TGTTCTT-TTGGTTGGCGACGTTCCATTTGATGATTCGAATATCGCAGCGATGTATCGGA 750 |||| || ||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 708 TGTT-TTATTGGTTGGCGATGTTCCATTTGATGATTCGAATATCGCTGCGATGTATCGGA 766 Query 751 AGATTCATCGGAGAGATTATCGATTTCCGAGCTGGATTTCGAAACAAGCGAAATCGATAA 810 |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct 767 AGATTCATCGGAGAGATTATCGGTTTCCGAGCTGGATTTCGAAACAAGCTAAATCGATAA 826 Query 811 TCTATCAGATGTTAGATCCGAATCCAGTAACGAGGATGAGTATTGAAACAGTTATGAAGA 870 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | Sbjct 827 TCTATCAGATGTTAGATCCGAATCCAGTAACGAGGATGAGTATTGAAACAGTGATGAAAA 886 Query 871 CGAATTGGTTCAAGAAATCTCTAGAAACTTCTGAGTTTCATCGTAACATTTTTGATTCGG 930 |||||||||||||||| |||||||| ||||||||||||||||||||| | |||||||||| Sbjct 887 CGAATTGGTTCAAGAAGTCTCTAGAGACTTCTGAGTTTCATCGTAACGTCTTTGATTCGG 946 Query 931 AACCGGAGATGAAATCGAGTGTTAATTCGATTACTGCTTTCGATTTGATCTCGTTGTCGT 990 || ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 947 AAGTAGAGATGAAATCGAGTGTTAATTCGATTACTGCTTTTGATTTGATCTCGTTATCGT 1006 Query 991 CGGGGTTAGATCTTTCTGGATTGTTTGAGGTTAAGAAGAAGAAGGAGAGGAGATTCACCG 1050 |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct 1007 CGGGATTAGATCTTTCTGGATTGTTTGAGGCTAAGAAGAAGAAGGAGAGGAGATTCACGG 1066 Query 1051 CGAAGGTTTCGGCTGTTGAAGTGGAGGAGAAAGCGAAGATGATTGGGGAGAATTTAGGTT 1110 |||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1067 CGAAGGTTTCGGGTGTTGAAGTGGAGGAGAAGGCGAAGATGATTGGGGAGAAGTTAGGTT 1126 Query 1111 ATGTAGTgaagaagaagatgaagaa-a-g-aaggagaagcgaaggttgttggattaggga 1167 ||||||||||||||||||||| ||| | | ||||||||| |||||||||||||||||||| Sbjct 1127 ATGTAGTGAAGAAGAAGATGATGAAGAAGGAAGGAGAAGTGAAGGTTGTTGGATTAGGGA 1186 Query 1168 gaggaagaaCTGCGATTGTGGTGGAAGCGGTTGAGTTAACGGTGGATGTTGTGGTGGTTG 1227 |||||||||||| ||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 1187 GAGGAAGAACTGTGATTGTGGTGGAAGCAGTGGAGTTAACGGTGGATGTTGTGGTGGTTG 1246 Query 1228 AAGTGAAAGTTGTTGAAGGTGAAGAAGATGATTCACGGTGGTTTGATTTGATTACAGAGC 1287 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 1247 AAGTGAAAGTTGTTGAAGGTGAAGAAGATGATTCACGGTGGTCTGATTTGATTACTGAGC 1306 Query 1288 TTGAAGATATAGTTCTTTCATGGCACAATGACATCATGTAAATAGATTGTGACTT 1342 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1307 TTGAAGATATAGTTCTTTCATGGCACAATGACATCATGTAAATAGATTGTGACTT 1361 > AT4G14580.1 | Symbols: CIPK4, SnRK3.3 | CBL-interacting protein kinase 4 | chr4:8367887-8369167 REVERSE LENGTH=1281 Length=1281 Score = 634 bits (343), Expect = 0.0 Identities = 924/1194 (77%), Gaps = 81/1194 (7%) Strand=Plus/Plus Query 101 TCTCCTCGGAAAATACGAACTCGGTCGTCGACTCGGTAGCGGAAGCTTCGCGAAAGTTCA 160 ||| ||||||||||||||||||||||||||||| || |||||||||||||| ||||| || Sbjct 48 TCTTCTCGGAAAATACGAACTCGGTCGTCGACTAGGAAGCGGAAGCTTCGCTAAAGTCCA 107 Query 161 TCTAGCTCGATCAATCGA-ATCCGACGAGCTCGTCGCCATTAAAATCATCGAGAAG-AAG 218 | ||||||| || ||| | ||| ||| ||||| || || ||||||||||| ||| || Sbjct 108 TGTAGCTCGTTCCATCTCCA-CCGGCGAACTCGTAGCTATCAAAATCATCGACAAGCAA- 165 Query 219 AAAACAATCGAATCAGGCATGGAACCAAGAATAATCAGAGAGATCGATGCGATGCGTCGT 278 ||||| || || || || ||||| || ||||||||| |||||||||| |||||||| || Sbjct 166 AAAACCATAGATTCCGGTATGGAGCCGAGAATAATCCGAGAGATCGAAGCGATGCGCCGC 225 Query 279 CTTCGTCATC-ATCCAAACATACTTAAGATCCATGAAGTTATGGCAACCAAATCTAAGAT 337 || | || | | |||||| | || || ||||| ||||| ||||| || ||||| ||||| Sbjct 226 CTCCA-CAACCACCCAAACGTCCTCAAAATCCACGAAGTCATGGCCACTAAATCCAAGAT 284 Query 338 CTATCTCGTAATGGAACT-CGCTTCCGGTGGTGAACTTTTCTCTAAAGTCCTCCG-T-CG 394 ||| ||||| | ||| | ||| |||| || ||||| ||| | ||| || |||| | || Sbjct 285 CTACCTCGTCGTCGAA-TACGCCGCCGGAGGAGAACTCTTCACCAAACTCATCCGATTCG 343 Query 395 TGGTCGTCTTC-CTGAATCAACGGCGCGTCGTTACTTTC-AACAACTAGCCTCCGCGCTT 452 | || ||| | ||||| ||||||||||||| |||| ||||||| ||||||||||| Sbjct 344 -GC-CGCCTTAAC-GAATCGGCGGCGCGTCGTTA-TTTCCAACAACTCGCCTCCGCGCTC 399 Query 453 AGATTCT-CTCACCAAGACGGTGTCGCTCACCGTGATGTGAAACCACAGAATCTACTC-T 510 || |||| | |||| ||||| ||||||| || || ||||| ||||||||||| ||| | Sbjct 400 AGTTTCTGC-CACCGCGACGGAATCGCTCATCGCGACGTGAAGCCACAGAATCTCCTCCT 458 Query 511 TAGATCAGCAAGGTAACCTCAAGGTCTCTGACTTTGGTTTATCAGCTTTACCGGAACATC 570 | ||| ||||||| |||||||||||||| ||||||||| |||| ||||||||||| |||| Sbjct 459 T-GATAAGCAAGGAAACCTCAAGGTCTCCGACTTTGGTCTATCGGCTTTACCGGAGCATC 517 Query 571 TCC--AA-AACGGATTGCTTCACACGGCGTGTGGTACTCCGGCTTACACAGCTCCGGAGG 627 || |||||||||||||||||||| ||||| || |||||||| ||||| ||||| | Sbjct 518 GAAGTAATAACGGATTGCTTCACACGGCATGTGGCACACCGGCTTATACAGCACCGGAAG 577 Query 628 TTATTTCGCGGCGAGGATACGACGGAGCGAAAGCTGATGCGTGGTCTTGTGGTGTGATTT 687 | ||| | | | |||| |||||||| || ||||||||||||||||| ||||||||| ||| Sbjct 578 TAATTGCTCAGAGAGGTTACGACGGTGCTAAAGCTGATGCGTGGTCGTGTGGTGTG-TTT 636 Query 688 -TGTTTGTTCTT-TTGGTTGGCGACGTTCCATTT-GATGATTCGAATATCGCAGCGATGT 744 | ||||||||| ||| | || ||||||| ||| |||||| | || || | || |||| Sbjct 637 CTCTTTGTTCTTCTTGCT-GGTTACGTTCC-TTTCGATGATGCCAACATTGTTGCTATGT 694 Query 745 ATCGGAAGATTCATCGGAGAGATTATCGATTTCCGAGCTGGATTTCGAAACAAGCGAAAT 804 || ||||||||||| |||||||| || |||||||||||||| ||||||| || || Sbjct 695 ATAGGAAGATTCATAAAAGAGATTACCGGTTTCCGAGCTGGATCTCGAAACCGGCTCGAT 754 Query 805 CGATAATCTATCAGATG-TTAGATCCGAATCCAGTA-ACGAGGATGAGTATTGAAACAGT 862 | || || ||| || || || ||||||||||| | | |||||||||||||| ||| | || Sbjct 755 CTATTATATATAAGTTGCTT-GATCCGAATCCGG-AGACGAGGATGAGTATAGAAGCTGT 812 Query 863 TATGAAGA-CGAATTGGTT-CAAGAAATCTCTAGAAACTTCTGAGTTTCA-TCGTAACAT 919 ||| || || |||||| ||| ||||||||||| | ||| |||||||| || || | Sbjct 813 GATGG-GAACGGTTTGGTTTCAA-AAATCTCTAGAGATTTCGGAGTTTCAGTC-TAGTGT 869 Query 920 TTTTGA-TTCGGAACCG------GAGAT-GAAATCGA-GT-GTT-AATTCGATTACTGC- 967 ||||| || ||| | | |||| ||| ||| || | ||| |||||||||| Sbjct 870 GTTTGAGTT-GGATCGGTTTCTTGAGAAAGAAG-CGAAGTCGAGCAATGCGATTACTGCG 927 Query 968 TTTCGATTTGATCTCGTTGTCGTCGGGGTTAGATCTTTCTGGATTGTTTGAG-GTTAAGA 1026 ||| ||||||||||||||||| ||||| || |||||||| || ||||||||| | | || Sbjct 928 TTT-GATTTGATCTCGTTGTCATCGGGATTGGATCTTTCGGGGTTGTTTGAGAGG-AGGA 985 Query 1027 AGAAGAAGGAGAGGAGATTCACCGCGA-AGGTTTCGGCTGTT-GAAGTGGAGGAGAAAGC 1084 ||| ||| |||| ||| || || |||| || | ||||| | || |||| |||||| || Sbjct 986 AGAGGAAAGAGAAGAGGTTTACGGCGAGAG-TGTCGGCGGAAAGA-GTGGTGGAGAAGGC 1043 Query 1085 GAAGATGATTGGGGAGAATTTAGGTTATGTAGTgaagaagaagatgaagaaagaaggaga 1144 | |||||| ||||| || ||||| | | ||| | | | || |||||| |||| ||| Sbjct 1044 GGGGATGATAGGGGAAAAGTTAGGGT-T-TAG--A-GT-G--GA-GAAGAAGGAAG-AGA 1093 Query 1145 agcgaaggttgttggattagggaga-ggaagaaCTGCGATTGTGGTGGAAGCGGTTGAGT 1203 | ||||| || ||||| |||| | |||||||||||| | ||||| || | ||| |||| Sbjct 1094 --CTAAGGTGGTGGGATT-GGGAAAAGGAAGAACTGCGGTGGTGGTTGAGGTGGTGGAGT 1150 Query 1204 TAACGGT-GGATGTTG-TGGTGGTTGAAGTGAAAGTTGT--TG-AAGGTGAAGA 1252 | ||| || |||| | |||| || ||||| ||||| || |||||||||| Sbjct 1151 TTGCGGAAGG--GTTGGTTGTGGCGGATGTGAAGGTTGTGGTGGAAGGTGAAGA 1202 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 66063917220 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5