BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480305 Length=1514 Score E Sequences producing significant alignments: (Bits) Value AT2G13360.1 | Symbols: AGT, AGT1, SGAT | alanine:glyoxylate ami... 2366 0.0 > AT2G13360.1 | Symbols: AGT, AGT1, SGAT | alanine:glyoxylate aminotransferase | chr2:5539240-5541358 REVERSE LENGTH=1540 Length=1540 Score = 2366 bits (1281), Expect = 0.0 Identities = 1449/1529 (95%), Gaps = 16/1529 (1%) Strand=Plus/Plus Query 1 CATGTAATTGaaaataaataaat-taat--taaaaa-aaaaa-aa-aaGATATAGTAAAG 54 ||||||||| ||||||||||||| ||| ||||| ||||| || |||||||| ||||| Sbjct 6 CATGTAATTTAAAATAAATAAATAAAATAAAAAAAAGAAAAAGAAGAAGATATATTAAAG 65 Query 55 AGGTTTGTGAAGACGAAGGAGTCCAAAA-ATCCCTCAGGAGCTTCCGCCTTATTCAGAG- 112 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 66 AGGTTTGTGAAGACGAAGGAGTCCAAAACCTCCCTCAGGAGCTTCCGCCTTATTCAGAGT 125 Query 113 G-A-AGGAGGAGCAAAAAGAACA-AGG-AAAAATGGACTATATGTATGGACCAGGGAGAC 168 | | ||||||| | ||||||| | ||| |||||||||||||||||||||||||||||||| Sbjct 126 GTAGAGGAGGATCCAAAAGAAAAGAGGAAAAAATGGACTATATGTATGGACCAGGGAGAC 185 Query 169 ACCATCTGTTTGTGCCTGGACCAGTGAACATACCAGAACCGGTAATCCGGGCGATGAACC 228 ||||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||| Sbjct 186 ACCATCTGTTTGTACCAGGACCAGTGAACATACCGGAACCGGTAATCCGGGCGATGAACC 245 Query 229 GGAACAACGAGGATTACCGGTCACCAGCCATTCCGGCTCTTACAAAAACATTGTTGGAGG 288 ||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| Sbjct 246 GGAACAACGAGGATTACCGGTCACCAGCCATTCCGGCGCTTACGAAAACATTGTTGGAGG 305 Query 289 ATGTGAAGAAGATATTCAAGACCACATCTGGGACACCGTTTCTGTTTCCCACAACAGGGA 348 |||| ||||||||||||||||||||||| |||||||| |||||||||||||| || |||| Sbjct 306 ATGTTAAGAAGATATTCAAGACCACATCAGGGACACCTTTTCTGTTTCCCACGACCGGGA 365 Query 349 CTGGTGCTTGGGAGAGTGCCTTGACCAACACGTTATCTCCTGGAGACAGGATTGTTTCGT 408 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 366 CTGGTGCTTGGGAGAGTGCCTTGACCAACACGTTATCTCCTGGAGACAGGATTGTTTCGT 425 Query 409 TTCTCATCGGACAATTTAGCTTGCTCTGGATTGACCAACAGAAGAGGCTAAATTTCAATG 468 |||| || ||||||||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct 426 TTCTGATTGGACAATTTAGCTTGCTCTGGATTGACCAGCAGAAGAGGCTTAATTTCAATG 485 Query 469 TTGATGTGGTTGAGAGTGAGTGGGGACAAGGTGCTAATCTCCAAGTCTTAGCCTCAAAGC 528 ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 486 TTGATGTGGTTGAGAGTGATTGGGGACAAGGTGCTAATCTCCAAGTCTTGGCCTCAAAGC 545 Query 529 TCTCACAAGACGAGAATCATACCATCAAAGCCATTTGCATTGTCCACAACGAGACCGCGA 588 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 546 TCTCACAAGACGAGAATCATACCATCAAAGCCATTTGCATTGTCCACAACGAGACCGCGA 605 Query 589 CCGGAGTCACTAATGACATCTCTGCTGTCCGCACACTCCTTGATCACTACAAGCACCCGG 648 ||||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||| Sbjct 606 CCGGAGTTACCAATGACATCTCTGCTGTCCGCACACTCCTCGATCACTACAAGCATCCGG 665 Query 649 CTTTGCTGCTAGTGGACGGTGTCTCGTCCATTTGTGCGATTGATTTCCGAATGGATGAGT 708 |||||||||||||||||||||| |||||||| || ||| ||||||||||||||||||||| Sbjct 666 CTTTGCTGCTAGTGGACGGTGTTTCGTCCATCTGCGCGCTTGATTTCCGAATGGATGAGT 725 Query 709 GGGGAGTGGACGTGGCCTTGACCGGCTCTCAGAAAGCCTTGTCTCTTCCAACAGGACTTG 768 |||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct 726 GGGGAGTGGACGTGGCCTTGACTGGGTCTCAGAAAGCCTTATCTCTTCCAACAGGACTTG 785 Query 769 GTATTGTGTGCGCCAGTCCTAAAGCCTTGGAAGCTACCAAAACTTCTAAATCTCTCAAAG 828 ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 786 GTATTGTCTGCGCCAGTCCTAAAGCTTTGGAAGCTACCAAAACTTCTAAATCTCTCAAAG 845 Query 829 TATTCTTTGATTGGAATGACTACCTTAAGTTTTACAAGCTAGGAACATATTGGCCTTACA 888 |||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 846 TATTCTTTGACTGGAATGACTACCTTAAGTTTTACAAGCTAGGAACCTATTGGCCATACA 905 Query 889 CACCTTCCATTCAACTCCTCTACGGTCTTAGAGCTGCTCTTGATCTTATATTTGAGGAAG 948 |||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct 906 CACCTTCCATTCAACTTCTCTACGGTCTTAGAGCTGCTCTTGATCTTATCTTTGAGGAAG 965 Query 949 GACTTGAGAATATCATCGCGCGGAATGCTCGTCTTGG-AAAGGCCACCAGGCTTGCGGTG 1007 |||||||||| |||||||| || |||||||| |||| |||||||||||||||||||||| Sbjct 966 GACTTGAGAACATCATCGCCCGCCATGCTCGT-TTGGGAAAGGCCACCAGGCTTGCGGTG 1024 Query 1008 GAAGCATGGGGGCTGAAAAACTGCACACAGAAGGAGGAGTGGATAAGTAACACTGTCACC 1067 |||||||||||||||||||||||||||||||||||||| |||||||||||||| || || Sbjct 1025 GAAGCATGGGGGCTGAAAAACTGCACACAGAAGGAGGAATGGATAAGTAACACAGTGACA 1084 Query 1068 GCAGTTATGGTGCCTCCGCATATAGACAGTTCGGAGATTGTGAGAAGGGCATGGAAGAGG 1127 ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| Sbjct 1085 GCAGTTATGGTGCCTCCGCATATAGACGGTTCGGAGATTGTGAGAAGGGCATGGCAGAGG 1144 Query 1128 TACAACTTAAGTCTTGGTCTTGGTCTCAACAAAGTGGCTGGAAAGGTTTTCAGAATTGGA 1187 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1145 TACAACTTAAGTCTTGGTCTTGGTCTCAACAAAGTGGCTGGAAAGGTTTTCAGAATTGGA 1204 Query 1188 CATCTAGGAAACGTGAATGAGTTGCAACTTCTCGGGTGTCTTGCGGGAGTGGAGATGATA 1247 || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1205 CACCTAGGAAATGTGAATGAGTTGCAACTTCTCGGGTGTCTTGCGGGAGTGGAGATGATA 1264 Query 1248 CTGAAGGATGTTGGGTACCCAGTTGTAATGGGAAGTGGAGTTGCAGCTGCTTCTACTTAT 1307 |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1265 CTGAAGGATGTTGGATACCCAGTTGTAATGGGAAGTGGAGTTGCAGCTGCCTCTACTTAT 1324 Query 1308 CTTCAGCACCACATTCCTCTCATTCCCTCTAGAATCTAATCCATTTG-TCCctctctttc 1366 |||||||||||||||||||||||||||||||||||||||||||| || ||| |||||||| Sbjct 1325 CTTCAGCACCACATTCCTCTCATTCCCTCTAGAATCTAATCCATGTGGTCCTTCTCTTTC 1384 Query 1367 tttctcttcctctcaatgtaaacaa-ctctcatgctttctcttttctccatctATATCTT 1425 ||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||| || Sbjct 1385 TTTCTCTTCCTCTCAATGTAAACAAACTCTCATGTTTTCTCTTTTCTTCATCTATATTTT 1444 Query 1426 TACTACATTATCTATGTTTTTATTTGCTATCTCCAACAAACTTATTAAACAAAAGGTCAA 1485 |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| Sbjct 1445 TACTACATTATCTATGTTTTTATTTGCTATCTCCAACAAACTTATTGAACAAAAGATCAA 1504 Query 1486 ATATGTTTATTACTCACTATTAACTTTGT 1514 |||||||||||||||||||| |||||||| Sbjct 1505 ATATGTTTATTACTCACTATAAACTTTGT 1533 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 74698410960 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5