BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480333
Length=2735
Score E
Sequences producing significant alignments: (Bits) Value
AT2G14120.3 | Symbols: DRP3B | dynamin related protein | chr2:5... 2143 0.0
AT4G33650.2 | Symbols: DRP3A | dynamin-related protein 3A | chr... 1879 0.0
> AT2G14120.3 | Symbols: DRP3B | dynamin related protein | chr2:5953940-5960108
REVERSE LENGTH=2836
Length=2836
Score = 2143 bits (1160), Expect = 0.0
Identities = 1371/1472 (93%), Gaps = 18/1472 (1%)
Strand=Plus/Plus
Query 1279 GGAGGTTGATCCATGCGAAGACTTAACAGCTGATGATATTCGGACTGCAATACAAAATGC 1338
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1365 GGAAGTTGATCCATGTGAAGACTTAACAGCTGATGATATTCGGACTGCAATACAAAATGC 1424
Query 1339 AACTGGTCCCAGATCTGCAATATTTGTTCCAGATGTTCCATTTGAAGTTCTTGTCAGGAG 1398
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1425 AACTGGTCCCAGATCTGCATTATTTGTTCCAGATGTTCCATTTGAAGTTCTTGTCAGGAG 1484
Query 1399 GCAAATATCTCGTTTACTAGATCCCAGCCTTCAGTGCGCTAGGTTCATCTTTGATGAGCT 1458
|||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1485 GCAAATATCTCGTTTATTAGATCCCAGCCTTCAGTGCGCTAGGTTCATCTTCGATGAGCT 1544
Query 1459 AGTAAAGATTAGTCATCAGTGTATGATGACAGAGTTACAGCGCTTCCCAGTCCTGCAAAA 1518
||||||||||||||||||||||||||||| |||||||||||| || ||||||||||||||
Sbjct 1545 AGTAAAGATTAGTCATCAGTGTATGATGAAAGAGTTACAGCGGTTTCCAGTCCTGCAAAA 1604
Query 1519 GCGCATGGATGAGGTTATTGGGAACTTTCTGCGAGAAGGTCTTGAACCTTCACAGGCAAT 1578
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1605 GCGCATGGATGAGGTTATTGGGAACTTTCTGCGAGAAGGTCTTGAACCTTCGCAGGCAAT 1664
Query 1579 GATCCGAGATCTTATTGAAATGGAGATGGATTACATAAACACCTCACACCCAAATTTTAT 1638
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1665 GATCCGAGATCTTATTGAAATGGAGATGGATTATATAAACACCTCACACCCAAATTTTAT 1724
Query 1639 CGGGGGAACCAAAGCCGTGGAGCTTGCAATGC-AACTAGTTAAATCTTCAAGGATTCCGC 1697
||||||||| ||||||||||||| ||||||| ||| ||| |||||||| ||||||||||
Sbjct 1725 CGGGGGAACTAAAGCCGTGGAGCAAGCAATGCAAAC-AGTCAAATCTTCTAGGATTCCGC 1783
Query 1698 ATCCTGTTGCGCGGCCAAGTGACACTGTGGAGCCTGCGAAGACAACTTCTTTTGCGAGTC 1757
||||||||||||||||||| || ||||||||||||| || ||| |||||| | |||||
Sbjct 1784 ATCCTGTTGCGCGGCCAAGGGATACTGTGGAGCCTGAGAGGACGGCTTCTTCCGGGAGTC 1843
Query 1758 AAATAAAAACCCGATCTTTTCTCGGCCGACAAGCTAATGG-------A---ATC-GG-AG 1805
|||||||||||||||||||||||||||||||||||||||| | ||| || ||
Sbjct 1844 AAATAAAAACCCGATCTTTTCTCGGCCGACAAGCTAATGGAATCATCACTGATCAGGCAG 1903
Query 1806 TTCCAACTGCAGCAGATGCTGAAAGATCTGCACCAGCTGGAAACTCAAGATGGAGTGGTT 1865
|||||||||||||||||||||||||| ||||||||||||||| | |||| ||||||||||
Sbjct 1904 TTCCAACTGCAGCAGATGCTGAAAGACCTGCACCAGCTGGAAGCACAAGCTGGAGTGGTT 1963
Query 1866 TCTCATCAATTTTCCGGGGGAATGATGGTCAGGCAGCTGCTGAAAATAGCCTACTAAACA 1925
||||||||||||| ||||||| ||||||||||||||||||| |||| | |||| ||||||
Sbjct 1964 TCTCATCAATTTTTCGGGGGAGTGATGGTCAGGCAGCTGCTAAAAACAACCTATTAAACA 2023
Query 1926 AACCGTTCAGCGAAGCTGCTCAAGATGTGTATCAGAACTTGTCAACAATCTATTTAAAGG 1985
|||| ||||||||| || ||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2024 AACCATTCAGCGAAACTACTCAAGAAGTGTATCAGAACTTGTCAACAATCTATTTAAAGG 2083
Query 1986 AGCCTCCAACCATTTTG-AGATCATCGGAAACTCATTCAGAACAGGAGGCAGTTGAGATT 2044
|||||||||| |||||| || ||||| ||||||||||||||||||||| |||||||||||
Sbjct 2084 AGCCTCCAACTATTTTGAAG-TCATCTGAAACTCATTCAGAACAGGAGTCAGTTGAGATT 2142
Query 2045 CAGATAACAAAGCTATTATTGAAATCCTACTATGACATTGTAAGGAAGAATGTTGAGGAC 2104
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2143 GAGATAACAAAGCTATTATTGAAATCCTACTATGACATTGTAAGGAAGAATGTCGAGGAC 2202
Query 2105 TTGGTCCCAAAAACAATCATGCATTTTCTGGTAAATTACACGAAACGTGAGCTGCACAAT 2164
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2203 TTGGTCCCAAAAGCAATCATGCATTTTCTGGTAAATTACACGAAACGTGAGCTGCACAAT 2262
Query 2165 GTTTTCATCGAGAAGCTTTACAGGGAGAACTTGATTGAAGAACTGCTGAAAGAGCCAGAT 2224
|||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||
Sbjct 2263 GTTTTCATCGAGAAGCTTTACAGGGAGAACTTAATTGAAGAACTGTTGAAAGAGCCCGAT 2322
Query 2225 GAGTTAGCGATAAAGAGGAAACGCACGCTGGAGACTCTTCGCATTCTTCAGCAGGCTAAT 2284
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2323 GAGTTAGCGATAAAGAGGAAACGCACGCAAGAGACTCTTCGCATTCTTCAGCAGGCTAAT 2382
Query 2285 CGGACATTAGACGAGCTGCCCTTGGAAGCAGAATCAGTCGAGAGAGGTTACAGAATTGGT 2344
||||| |||||||||||||| || ||||| ||||| |||||||||||||||| |||||||
Sbjct 2383 CGGACGTTAGACGAGCTGCCGTTAGAAGCTGAATCGGTCGAGAGAGGTTACAAAATTGGT 2442
Query 2345 TCAGAATCGAAACATGAGGAGTTACCGGGTACAAGAAGATCAAGAACAGAAACTAATGGG 2404
|||||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 2443 TCAGAAGCGAAACATGAGGAGTTACCGGGCACAAGAAGATCAAGGACAGAAACTAATGGG 2502
Query 2405 AACGGACGGTTTCACATGTAAATTCAAATTGTGATTGCACGCATAATTCATCCATTTGGT 2464
||||||||| |||| ||||||||||||||||||||||||||||| | |||| ||||||||
Sbjct 2503 AACGGACGGCTTCATATGTAAATTCAAATTGTGATTGCACGCATGACTCATTCATTTGGT 2562
Query 2465 GATGGAAAAGATTTGTTTCCTTCCCTTTAAATCGGTTGTGCGTGGGGAAAGAAAGGTGTT 2524
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2563 GATGGAAAAGATTTGTTTTCTTCCCTTTAAATCGGTTGTGCGTGGGGAAAGAAAGGTGTT 2622
Query 2525 CTTAGGTATAGTGAAACATGATGAGAAACAG-GGTTTTGTTGTGAGGGTATCATCAACCT 2583
||||||||||||||||| |||||| |||||| ||||||||||||||||||| ||||||||
Sbjct 2623 CTTAGGTATAGTGAAACGTGATGATAAACAGAGGTTTTGTTGTGAGGGTATTATCAACCT 2682
Query 2584 ATTAGATAATGTGACTTATTATTTGTTTCTCGGAGCCGAGAAGAATATTCAAATTCCTAA 2643
| | || ||||||||||| |||||||||||| | |||||||||||| |||| |||||||
Sbjct 2683 ACTGGAAAATGTGACTTAATATTTGTTTCTCAAAACCGAGAAGAATAATCAA-TTCCTAA 2741
Query 2644 TTTTACTTTTCATTGCTTTATTTGTTAAGaaaaaaaaGAACGTATTTGAGCCAATGTAAT 2703
||||||||||||| ||||||||||||| |||||| ||||||||| |||| |||||||||
Sbjct 2742 TTTTACTTTTCATAGCTTTATTTGTTACGAAAAACAAGAACGTACATGAGACAATGTAAT 2801
Query 2704 GATAAATTTATCACTGTTGAGTTGATCTTGTT 2735
|||||||||||||||| | |||||||||||||
Sbjct 2802 GATAAATTTATCACTGGTAAGTTGATCTTGTT 2833
Score = 2071 bits (1121), Expect = 0.0
Identities = 1214/1259 (96%), Gaps = 5/1259 (0%)
Strand=Plus/Plus
Query 24 TTGCAACAATTCTTCTCAAAACCCTAACCCCTTTTTCAAATTCTACTTCCTTCTTTAGAT 83
||||||||| ||| |||||||||||||||||||||||||| | ||||||| |||||||||
Sbjct 24 TTGCAACAAATCTACTCAAAACCCTAACCCCTTTTTCAAA-T-TACTTCCATCTTTAGAT 81
Query 84 CG-ATCAAATCAATGTCCGTCGACGATCTACCTCCGTCACCGGCCTCCGCCGTAACGCCA 142
|| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 82 CGAATCAAATCAATGTCCGTCGACGATCTCCCTCCGTCGTCGGCCTCCGCCGTAACGCCA 141
Query 143 CTAGGCTCCTCCGTGATTCCAATTGTTAACAAGCTTCAAGACATATTCGCTCAGCTAGGA 202
|||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||
Sbjct 142 CTAGGCTCCTCCGTGATTCCGATTGTGAACAAGCTCCAAGACATATTCGCTCAGCTAGGA 201
Query 203 AGCCAATCGACGATCGCGCTTCCGCAAGTAGCTGTCGTCGGAAGTCAAAGCAGTGGCAAA 262
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 202 AGTCAATCGACGATCGCTCTTCCGCAAGTAGCTGTCGTCGGAAGTCAAAGCAGTGGCAAA 261
Query 263 TCCAGCGTTCTCGAAGCACTCGTCGGCCGTGACTTTCTTCCTCGTGGCAATGATATCTGC 322
||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||
Sbjct 262 TCCAGCGTTCTAGAAGCTCTCGTCGGCCGTGACTTTCTTCCTCGTGGCAATGATATTTGC 321
Query 323 ACGCGCCGACCTCTCCGTCTCCAGCTTGTTCAGACGAAACCTCGCTCCGATGGTGGATCC 382
|||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct 322 ACGCGCCGACCTCTCCGTCTCCAGCTTGTTCAGACGAAACCTAGCTCTGATGGTGGATCC 381
Query 383 GATGAAGAGTGGGGAGAGTTTCTTCACCACGATCCTGTTAAACGTATCTACGATTTCTCT 442
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 382 GATGAAGAGTGGGGCGAGTTTCTTCACCACGATCCTGTTAGACGTATCTACGATTTCTCT 441
Query 443 GAGATTCGTCGTGAGATTGAGGCGGAGACTAATAGAGTATCAGGAGAGAACAAAGGTGTA 502
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 442 GAGATTCGCCGTGAGATTGAGGCGGAGACTAATAGAGTATCAGGAGAGAACAAAGGTGTA 501
Query 503 TCAGATATTCCGATTGGTTTGAAAATATTTTCACCTAATGTTTTGGATATCAGTCTTGTG 562
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 502 TCAGATATTCCGATTGGTTTGAAGATATTTTCACCTAATGTTTTGGATATTAGTCTTGTG 561
Query 563 GATCTTCCTGGTATCACTAAGGTTCCTGTTGGTGATCAGCCAACTGACATCGAAGCGCGT 622
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 562 GATCTTCCTGGTATCACTAAGGTTCCTGTTGGTGATCAGCCAAGTGATATCGAAGCGCGT 621
Query 623 ATAAGAACGATGATCTTGACTTACATTAAGGAATCTAGCTGCTTGATACTTGCTGTTACC 682
||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| |
Sbjct 622 ATAAGAACGATGATCTTGACTTACATTAAGGAACCTAGTTGCTTGATACTTGCTGTTAGC 681
Query 683 CCTGCTAATACCGATTTAGCAAATTCAGATGCATTACAAATCGCAGGAAATGCTGATCCT 742
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 682 CCTGCTAATACTGATTTAGCAAATTCAGATGCATTACAAATCGCAGGAAATGCTGATCCT 741
Query 743 GATGGTCATAGAACCATAGGTGTAATCACAAAGTTGGATATTATGGACAGAGGTACTGAT 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 742 GATGGTCATAGAACCATAGGTGTAATCACAAAGTTGGATATTATGGACAGAGGTACTGAT 801
Query 803 GCTCGGAATCACCTTCTTGGAAAAACAATACCTCTTCGACTTGGATACGTGGGAGTTGTA 862
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 802 GCTCGGAATCACCTTCTGGGAAAAACAATTCCTCTTCGACTTGGATACGTGGGAGTTGTA 861
Query 863 AATCGTAGTCAAGAGGATATTTTGATGAACCGTAGCATCAAGGATGCTCTTATTGCAGAG 922
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 862 AATCGTAGTCAAGAGGATATTTTGATGAACCGTAGCATCAAGGATGCTCTTGTTGCAGAG 921
Query 923 GAAAAGTTCTTTCTTAGTCGTCCAGCTTACAGCGGTCTCACAGATCGTTTGGGTGTCCCT 982
||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 922 GAAAAGTTCTTTCGTAGTCGTCCAGTTTACAGCGGTCTCACAGATCGTTTGGGTGTCCCT 981
Query 983 CAATTGGCAAAGAAATTAAATCAGGTCCTTGTCCAACACATCAAGGCACTGCTTCCTAAT 1042
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
Sbjct 982 CAACTGGCAAAGAAATTAAATCAGGTCCTTGTTCAACACATCAAGGCACTGCTTCCTAGT 1041
Query 1043 TTAAAGTCACATATCAACAATGCATTGTTTGCTACAGCAAAGGAGTATGAGAGCTATGGG 1102
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1042 TTAAAGTCACGTATCAACAATGCATTGTTTGCTACAGCAAAGGAGTATGAGAGCTATGGG 1101
Query 1103 GATATAACAGAGTCCAGGGGTGGTCAAGGAGCTCTTCTCCTCAGTTTTATTACAAAATAC 1162
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1102 GATATAACAGAGTCTAGGGGTGGTCAAGGAGCTCTTCTCCTCAGTTTTATTACAAAATAC 1161
Query 1163 TGTGAAGCATACTCCTCAACCCTGGAAGGGAAAAGTAAAGAAATGTCAACATCTGAGCTC 1222
|| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1162 TGCGAAGCATACTCCTCTACCCTGGAAGGGAAAAGTAAAGAAATGTCAACATCTGAGCTC 1221
Query 1223 TCGGGTGGAGCAAGAATTCTCTACATCTTTC-AATCAGTCTTTGTTAAGAGCTTAGAGG 1280
|||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||
Sbjct 1222 TCGGGTGGAGCAAGAATTCTCTACAT-TTTCCAATCAGTATTTGTTAAGAGCTTAGAGG 1279
> AT4G33650.2 | Symbols: DRP3A | dynamin-related protein 3A | chr4:16160824-16166893
FORWARD LENGTH=2985
Length=2985
Score = 1879 bits (1017), Expect = 0.0
Identities = 1836/2222 (83%), Gaps = 93/2222 (4%)
Strand=Plus/Plus
Query 149 TCCTCCGTGATTCCAATTGTTAACAAGCTTCAAGACATATTCGCTCAGCTAGGAAGCCAA 208
||||| |||||||| ||||| |||||||| |||||||||||||||||||| ||||||||
Sbjct 352 TCCTCTGTGATTCCGATTGTAAACAAGCTACAAGACATATTCGCTCAGCTCGGAAGCCAG 411
Query 209 TCGACGATCGCGCTTCCGCAAGTAGCTGTCGTCGGAAGTCAAAGCAGTGGCAAATCCAGC 268
|| |||||||||||||| || || | ||| || ||||| |||||||||||||| || |||
Sbjct 412 TCTACGATCGCGCTTCCTCAGGTTGTTGTTGTTGGAAGCCAAAGCAGTGGCAAGTCTAGC 471
Query 269 GTTCTCGAAGCACTCGTCGGCCGTGACTTTCTTCCTCGTGGCAATGATATCTGCACGCGC 328
|| || |||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 472 GTCCTTGAAGCACTCGTCGGCCGTGACTTTCTCCCTCGTGGTAATGATATCTGCACGCGT 531
Query 329 CGACCTCTCCG-TCTCCAGCTTGTTCAGAC-GAAA-CCTCGCTCCGATGGTGGATCCGAT 385
|| ||||| | ||||||||| | ||||| ||| || |||| |||| |||||||||
Sbjct 532 CGTCCTCT-TGTTCTCCAGCTCCTCCAGACTAAAAGCCGCGCT--AATGGCGGATCCGAT 588
Query 386 GAAGAGTGGGGAGAGTTTCTTCACCACGATCCTGTTAAA--CGTATCTACGATTTCTCTG 443
|| |||||||| ||||||| ||| | | ||||| ||| ||| |||| ||||||||||
Sbjct 589 GATGAGTGGGGGGAGTTTCGTCA-C-C-TTCCTG--AAACTCGTTTCTATGATTTCTCTG 643
Query 444 AGATTCGTCGTGAGATTGAGGCGGAGACTAATAGAGTA-TCAGGAGAGAACAAAGGTGTA 502
|||||||||| || |||||||| ||||| |||||| || | ||||||||||||||||||
Sbjct 644 AGATTCGTCGAGAAATTGAGGCTGAGACGAATAGATTAGT-TGGAGAGAACAAAGGTGTA 702
Query 503 TCAGATATTCCGATTGGT-TTGAAAATATT-TTCACCTAATGTTTTGGATATCA-GTCTT 559
|||||| | |||| || || ||||| || |||||||||||| ||| | |||| | |||
Sbjct 703 GCAGATACACAGATTCGTCTT-AAAAT-TTCTTCACCTAATGTATTGAACATCACG-CTT 759
Query 560 GTGGATCTTCCTGGTATCACTAAGGTTCCTGTTGGTGATCAGCCAACTGACATCGAAGCG 619
|||||||| |||||||| || ||||| || |||||||| |||||| | ||||| |||||
Sbjct 760 GTGGATCTGCCTGGTATTACCAAGGTGCCAGTTGGTGACCAGCCATCCGACATTGAAGCA 819
Query 620 CGTATAAGAACGATGATCTTGACTTACATTAAGGAATCTAGC-TGCTTGATACTT-GCTG 677
||||||||||||||||||||| ||||||| ||| || || | ||||||||| || ||||
Sbjct 820 CGTATAAGAACGATGATCTTGTCTTACATCAAGCAAGATA-CTTGCTTGATA-TTGGCTG 877
Query 678 TTACCCCTGCTAATACCGATTTAGCAAATTCAGATG-CATTACAAATCGC-AGGAAATGC 735
|||||||||||||||||||| ||||||| || |||| | || ||||| || | | | ||
Sbjct 878 TTACCCCTGCTAATACCGATCTAGCAAACTCTGATGCCCTT-CAAATTGCTA-GCATTG- 934
Query 736 T-GATCCTGATGGTCATAGAACCATAGGTGTAATCACAAAGTTGGATATTATGGACAGAG 794
| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 935 TAGATCCTGATGGTCACAGAACGATAGGTGTAATCACAAAGTTGGATATTATGGACAAAG 994
Query 795 GTACTGATGCTCGGAATCACCTTCTTGGAAAAACAATACCTCTTCGACTTGGATACGTGG 854
||||||||||||| || | |||||||||||| | ||||||||||||||||||||||
Sbjct 995 GTACTGATGCTCGAAAACTCCTTCTTGGAAATGTTGTTCCTCTTCGACTTGGATACGTGG 1054
Query 855 GAGTTGTAAATCGTAGTCAAGAGGATATTTTGATGAACCGTAGCA-TCAAGGATGCTCTT 913
|||||||||||||| | || |||||||||||| | ||||| | || ||||||| || |||
Sbjct 1055 GAGTTGTAAATCGTTGCCAGGAGGATATTTTGCTAAACCGCA-CAGTCAAGGAAGCACTT 1113
Query 914 ATTGCAGAGGAAAAGTTCTTTCTTAGTCGTCCAGCTTAC-AGCGGTCTCACAGATCGTTT 972
| |||||||| |||||||| | |||| || | |||| | ||||| | ||||||||
Sbjct 1114 CTCGCAGAGGAGAAGTTCTTCCGGAGTCACCCGGTTTACCAT-GGTCTTGCCGATCGTTT 1172
Query 973 GGGTGTCCCTCAATTGGCAAAGAAATTAAATCAGGTCCTTGTCCAACACATCAAGGCACT 1032
|||||| ||||| | |||||||| ||||||||| ||||||| ||||| ||||||| ||
Sbjct 1173 GGGTGTTCCTCAGCTAGCAAAGAAGTTAAATCAGATCCTTGTTCAACATATCAAGGT-CT 1231
Query 1033 -GCTTCCTAATTTAAAGTCACATATCAAC-AATGCATTGTTTGCTACAGCAAAGGAGTAT 1090
|||||| |||| ||||| | || || ||||| ||| ||||||||||||| ||| ||
Sbjct 1232 TGCTTCCGGATTTGAAGTCGCGGAT-AAGTAATGCTTTGGTTGCTACAGCAAAAGAGCAT 1290
Query 1091 GAGAGCTATGGGGATAT-AACAGAGTCCAGGGGTGGTCAAGGAGCTCTTCTCCTCAGTTT 1149
|||||||||| || || |||||| || |||| ||| ||||||||||||||||||| ||
Sbjct 1291 CAGAGCTATGGTGA-ATTAACAGAATCAAGGGCTGGGCAAGGAGCTCTTCTCCTCAACTT 1349
Query 1150 TAT-TACAAAATACTGTGAAGCATACTCCTCAACCCTGGAAGGGAAAAGTAAAGAAATGT 1208
| | | |||| ||||||||||||||||| ||| ||||||||||||||| |||||||||
Sbjct 1350 TCTCTCCAAA-TACTGTGAAGCATACTCTTCATTGCTGGAAGGGAAAAGTGAAGAAATGT 1408
Query 1209 CAACATCTGAGCTCTCGGGTGGAGCAAGAATTCTCTACATCTTTCAA-TCAGTCTTTGTT 1267
| || || |||||||| || ||||||||||||| ||| || |||| | ||| ||||||||
Sbjct 1409 CTACGTCAGAGCTCTCTGGAGGAGCAAGAATTCACTATAT-TTTCCAGTCAATCTTTGTT 1467
Query 1268 AAGAGCTTAGAGGAGGTTGATCCATGCGAAGACTTAACAGCTGATGATATTCGGACTGCA 1327
||||| || |||||||||||||||||||| ||||| |||| |||||||||||||||||||
Sbjct 1468 AAGAGTTTGGAGGAGGTTGATCCATGCGAGGACTTGACAGATGATGATATTCGGACTGCA 1527
Query 1328 ATACAAAATGCAACTGGTCCCAGATCTGCAATATTTGTTCCAGATGTTCCATTTGAAGTT 1387
|| || |||||||||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 1528 ATTCAGAATGCAACTGGTCCAAGATCTGCATTATTTGTTCCAGATGTTCCATTTGAAGTT 1587
Query 1388 CTTGTCAGGAGGCAAATATCTCGTTTACTAGATCCCAGCCTTCAGTGCGCTAGGTTCATC 1447
||||| |||||||| ||||||||||| ||||||| ||||||||||| || |||||||
Sbjct 1588 CTTGTTAGGAGGCAGATATCTCGTTTGTTAGATCCTAGCCTTCAGTGTGCCCGGTTCATT 1647
Query 1448 TTTGATGAGCTAGTAAAGATTAGTCATCAG-TGTATGATGACA-GAGTTACAGCGCTTCC 1505
||||| |||||| |||||||||| ||| || |||||||||| | |||||||| || || |
Sbjct 1648 TTTGAAGAGCTAATAAAGATTAGCCAT-AGATGTATGATGA-ATGAGTTACAACGATTTC 1705
Query 1506 CAGTCCTGCAAAAGCGCATGGATGAGGTTATTGGGAACTTTC-TGCGAGAAGGTCTTGAA 1564
||||||| | ||||||||||||||||||||| ||| | |||| |||||||||||||||||
Sbjct 1706 CAGTCCTACGAAAGCGCATGGATGAGGTTATCGGGGA-TTTCCTGCGAGAAGGTCTTGAA 1764
Query 1565 CCTTCACAGGCAATGATCCGAGATCTTATTGAAATGGAGATGGATTACATAAACACCTCA 1624
|| ||| | ||||||||| | ||| | ||||| ||||||||||||||||||||||| |||
Sbjct 1765 CCCTCAGAAGCAATGATCGGGGATATCATTGATATGGAGATGGATTACATAAACACTTCA 1824
Query 1625 CACCCAAATTTTATCGGGGGAACCAAAGCCGTGGA-GCTTGCAATGCAACTAGTTAAATC 1683
|| ||||||||||| || |||||||| |||||||| ||| |||||||| | ||| || ||
Sbjct 1825 CATCCAAATTTTATTGGTGGAACCAAGGCCGTGGAAGCT-GCAATGCATCAAGTGAAGTC 1883
Query 1684 TTCAAGGATTCCGCATCCTGTTGCGCGGCCAA-GT-G-ACACTGTGGAGCCTGCGAAGA- 1739
||| |||||||| |||||||| || || |||| | | ||||||||||||||| | ||
Sbjct 1884 TTCGAGGATTCCCCATCCTGTGGCACGACCAAAGCAGGACACTGTGGAGCCTGATA-GAA 1942
Query 1740 CAACTTCTTTTGCGAGTCAAATAAAAACCCGATCTTTTCTCGGCCGACAAGCTAATGGAA 1799
|| |||||| |||||||| | ||| | |||| ||||||||| | |||||||||||||
Sbjct 1943 CATCTTCTTCCACGAGTCAAGTGAAATCTAGATCGTTTCTCGGCAGGCAAGCTAATGGAA 2002
Query 1800 TCGG-AGT--TCCA---ACT-GCA---GCAGATGCTGAAAGATCTGCA-CCAGCTGGAAA 1848
| | | | || | | | | | ||||||||||||| | || || || |||| |||
Sbjct 2003 TTGTTACTGATC-AGGGAGTTGTATCTGCAGATGCTGAAAAAGCT-CAACCTGCTGCAAA 2060
Query 1849 CT-CAAG--ATGGA-G-TGGT-T-TCTCATCAATTTTCCG-GGGGAATGATGGTCAG-GC 1899
| | || || | | ||| | || | ||||||||||| |||| |||| | || ||
Sbjct 2061 -TGCGAGTGATACAAGGTGGGGTATCCCTTCAATTTTCCGAGGGGG-TGATACT-AGAGC 2117
Query 1900 AGCTGCTGAAA-ATAGCCTACTAAACAAACCGTTCAGCGAAGCTGCTCAAGATGTGTATC 1958
|| | || ||| ||||| || |||||||||| ||||| ||||||| | | ||| ||| ||
Sbjct 2118 AGTTACT-AAAGATAGCTTATTAAACAAACCATTCAGTGAAGCTGTTGAGGATATGTCTC 2176
Query 1959 AGAACTTGTCAACAATCTATTTAAAGGAGCCTCCAACCATTTTGAGATCATCGGAAACTC 2018
| ||||| || | |||||| |||||||||| ||| | | ||||| || | ||||| |
Sbjct 2177 ACAACTTATCCATGATCTATCTAAAGGAGCCCCCAGCTGTCTTGAGGCCAACCGAAACCC 2236
Query 2019 ATTCAGAACAGGAGGCAGTTGAGATTCAGATAACAAAGCTATTATTGAA-ATCCTACTAT 2077
||||||||||||| |||||||||||||||||||||||||| ||| | || ||| ||||||
Sbjct 2237 ATTCAGAACAGGAAGCAGTTGAGATTCAGATAACAAAGCTGTTACT-AAGATCATACTAT 2295
Query 2078 GACATTGTAAGGAAGAATGTTGAGGACTTGGTCCCAAAAACAATCATGCATTTTCTGGTA 2137
|||||||||||||||||| ||||||||| ||| |||||| ||||||||||||| ||||||
Sbjct 2296 GACATTGTAAGGAAGAATATTGAGGACTCGGTACCAAAAGCAATCATGCATTTCCTGGTA 2355
Query 2138 AATTACACGAAACGTGAGCTGCACAATGTTTTCATCGAGAAGCTTTACAGGGAGAACTTG 2197
|| |||| |||||||||||||| || || |||||| |||||||||||||||||||||||
Sbjct 2356 AACCACACAAAACGTGAGCTGCATAACGTCTTCATCAAGAAGCTTTACAGGGAGAACTTG 2415
Query 2198 ATTGAAGAACTGCTGAAAGAGCCAGATGAGTTAGC-GATAAAGAGGAAACGCACGCTGGA 2256
|||||||| || || |||||||||||||| |||| | ||| |||||||||||| | ||
Sbjct 2416 TTTGAAGAAATGTTGCAAGAGCCAGATGAGATAGCAGTTAA-GAGGAAACGCACACAAGA 2474
Query 2257 GACTCTTCGCATTCTTCAGCAGGCTAATC-GGACATTAGACGAGCTGCC-CTTGGAAGCA 2314
|||||| | | |||||||||| ||| | | ||||| |||| ||| |||| || |||||||
Sbjct 2475 GACTCTCCACGTTCTTCAGCAAGCTTA-CAGGACACTAGATGAGTTGCCACT-GGAAGCA 2532
Query 2315 GA 2316
||
Sbjct 2533 GA 2534
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 135852081644
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5