BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480415 Length=1923 Score E Sequences producing significant alignments: (Bits) Value AT2G15560.1 | Symbols: | Putative endonuclease or glycosyl hyd... 2660 0.0 > AT2G15560.1 | Symbols: | Putative endonuclease or glycosyl hydrolase | chr2:6787869-6790101 REVERSE LENGTH=2091 Length=2091 Score = 2660 bits (1440), Expect = 0.0 Identities = 1755/1903 (92%), Gaps = 37/1903 (2%) Strand=Plus/Plus Query 1 ATATGCTTTCTCTGGACAAACGCAAAAACTTTTGAAGAACCCTAAAAA-TCCCAAAATCC 59 |||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct 2 ATATGCTTTCTCTGGACAAACGCAAAAACTTTTGTAGAACCCTAAAAATTCCCAAAATCC 61 Query 60 GCCGAAGAAGAAGATCGAGAAGAATCAACTACTAATCTGAAGAATTCGCGAAATTCCATC 119 | || |||||||||||||||||||||||| |||||||||||||||| | ||||||| || Sbjct 62 GTCGGAGAAGAAGATCGAGAAGAATCAACAACTAATCTGAAGAATTTTCCAAATTCCGTC 121 Query 120 TTCGTATCGTCTACG-CCT-GTGTATTCAATCT-TCAAG-ATCCGGAGCCTTTGATGATA 175 ||||||||||||||| | | || || ||| | | ||| ||| |||||||||||| Sbjct 122 TTCGTATCGTCTACGAGATCCT-TA-TC--TCTCCCCTGAATCTGGAACCTTTGATGATA 177 Query 176 CACAAA-GCTATGTCAAGTTATTATAATCCAT---CAGCAACAGCTTTAGTCTCTATTGA 231 || ||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| Sbjct 178 CA-AAACGCTATGTCAAGTTATTATAATCCATCAGCAGCAACAACTTTAGTCTCTATTGA 236 Query 232 TTCTGATGAACAAAGAAGAATCAAATATTTAGCAGATTTGAACATGATTGCAACACAGAG 291 ||| ||||||||||||||||||||||| |||| ||||| ||||||||||||||||| || Sbjct 237 TTCCGATGAACAAAGAAGAATCAAATACCTAGCGGATTTAAACATGATTGCAACACAAAG 296 Query 292 ACATTCTTCTACAGATGGTCCTATGGCTATTCTCTGGGATATGGAGAACTG-CCCTGTTC 350 ||||||||||||||||||||||||||| |||||||||||||||||||| || ||| |||| Sbjct 297 ACATTCTTCTACAGATGGTCCTATGGCCATTCTCTGGGATATGGAGAATTGTCCC-GTTC 355 Query 351 CTAGCGATGTACGTCCTGAAGATGTGGCTAGTAACATAAGAATGGCGATTCAGTTACATC 410 ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 356 CTAGCGATGTACGTCCTGAAGATGTAGCTAGTAACATAAGAATGGCTATTCAGTTACATC 415 Query 411 CGGTGATATCCGGTCCGGTTGTTAACTTCTCGGCTTACGGAGATTTCAATGCTTTCCCTC 470 | |||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||| Sbjct 416 CTGTGATATCCGGTCCCGTTGTTAACTTCTCGGCTTACGGGGATTTCAATGGTTTCCCTC 475 Query 471 GTCGGGTTCGAGAAGGTTGTCAAAGAACCGGTGTGAAGCTTGTTGATGTACCAAATGGTA 530 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 476 GTCGGGTTCGAGAAGGTTGTCAAAGAACCGGTGTGAAGCTTATTGATGTACCAAATGGTA 535 Query 531 GGAAAGATGCATCTGATAAAGCGATTTTGATTGATATGTTCTTGTTTGTACTTGATAATA 590 |||||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 536 GGAAAGATGCGTCGGATAAAGCGATTTTGATTGATATGTTCTTGTTTGTGCTTGATAATA 595 Query 591 AGCCGCCTGCGACTATTATTCTCGTATCGGGAGATGTTGATTTCGCGCCTGCGCTTCATA 650 |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct 596 AGCCGCCTGCGACTATCGTTCTCGTATCGGGTGATGTTGATTTCGCGCCTGCGCTTCATA 655 Query 651 TATTGGGTCAGCGTGGGTACACTGTGATTCTTGTTATACCTTCTAGTGTGTATGTGAACT 710 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct 656 TATTGGGTCAGCGTGGGTATACTGTGATTCTTGTTATACCTTCTAGTGTGTATGTGAATT 715 Query 711 CAGCTTTGTCTAATGCTGGGAGGTTTGTTTGGGATTGGCATAGTATTGTTCACGGTGAAG 770 ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| Sbjct 716 CAGCTTTGTCTAATGCTGGTAAGTTTGTTTGGGATTGGCATAGTATTGTTCACGGTGAAG 775 Query 771 GCTTTGTGCCGCTACGTAAACCTCGTGTTGTGCCATATCTTATGGGGTGTAATATCAGTG 830 |||||||||||| | |||||||||||||||| || |||||||||||||||||||| ||| Sbjct 776 GCTTTGTGCCGCGATGTAAACCTCGTGTTGTTCCGTATCTTATGGGGTGTAATATTGGTG 835 Query 831 ATAATAGTAACATGGATGGTATGAATGAAGATGAAACAATTCTCTATAGAGGTAACTGTT 890 |||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||| Sbjct 836 ATAACAGTAACATGGATGGTTTGAATGAAGATGAAACTATTCTCTATAGAGGTAACTGTT 895 Query 891 ATAGTA---ACCCAAGAGAG---TCTTCCTTGATGGTTTCGAAGTTTCATAACGAGTATA 944 |||||| | ||||||||| |||||||||||||||||| |||||| ||| ||||||| Sbjct 896 ATAGTAGTGATCCAAGAGAGTCTTCTTCCTTGATGGTTTCGCAGTTTCGTAATGAGTATA 955 Query 945 GTAGCAGCGCAATGTCGTGTTGGCCATCTAATTCAGGCGAGTCTTTGGCATATCCTCCTC 1004 ||||| | | |||||||||||||||||||||||||||||||||| |||||| ||||||| Sbjct 956 GTAGCGGTGTAATGTCGTGTTGGCCATCTAATTCAGGCGAGTCTATGGCATGTCCTCCTT 1015 Query 1005 CTGGTCACCTTGAGTCCACCATGTGGGTAGCGCCGGGAGATTTAAACGGTTTGAAGGGAC 1064 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1016 CAGGTCACCTTGAGTCCACCATGTGGGTAGCGCCGGGAGATTTAAACGGTTTGAAGGGGC 1075 Query 1065 AGCTTGTGAAGCTGCTAGAGCTCTCAGGTGGATGTATTCCTCTCAAGCGTATTCCTTCTG 1124 |||| ||||||||||||||||| |||||||||||||||||||| | |||| ||||||||| Sbjct 1076 AGCTCGTGAAGCTGCTAGAGCTTTCAGGTGGATGTATTCCTCTTATGCGTGTTCCTTCTG 1135 Query 1125 AATACCAAAGGAATTTCAGTAAACCGCTTTTTGTATCGGACTACGGGGTG-CACAAGCTT 1183 |||||||| |||| |||||||||||||||||||||||||| || |||||| | ||||||| Sbjct 1136 AATACCAACGGAAATTCAGTAAACCGCTTTTTGTATCGGATTATGGGGTGGC-CAAGCTT 1194 Query 1184 GTGGATCTGTTCAAAAAGATGAGTGATGTGATTGCAGTGGATAGTAAAGGCAACAAGAGA 1243 |||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||| Sbjct 1195 GTGGATCTGTTCAAAAAGATGAGTGATGTGATTGTAGTTGATGGTAAAGGCAACAAGAGA 1254 Query 1244 ATTGTTTACCTGCGCAACTCCAAACCGAACGTCATCTCTCCGTCTCCCCCTGTGGTTCTA 1303 ||||||||||||||||||| ||||||||| | |||||||| ||| |||||||||||||| Sbjct 1255 TTTGTTTACCTGCGCAACTCGAAACCGAACATTATCTCTCCTTCTTCCCCTGTGGTTCTA 1314 Query 1304 CTGAGAAGAGAGAAGAAAGGAAAAGCGCCTAACGGGGAAACTACCAATGGAGGAGTCTCC 1363 ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct 1315 CTGAGAAGAGAGAGGAAAGGAAAAGAGCCTAACGGGGTAACTACCAATGGAGGAGTCTCC 1374 Query 1364 TCTGATGAAATCTCAGACACGGGCTCGGTTCAGAGCGAGAGGAACCTCGAAGAGTTCAAA 1423 ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 1375 TCTGATGAAATGTCAGACACAGGCTCGGTTCAGAGCGAGAGGAACCTAGAAGAGTTCAAA 1434 Query 1424 TTCGAGCTACAAGACATTTTGGTGAGCTATTGTTGTGAGGTACAGATGGATTGTTTTGAG 1483 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| || Sbjct 1435 TTCGAGCTACAAGACATTTTGGTGAGCTATTGTTGTCAGGTACAGATGGATTGTTTCGAA 1494 Query 1484 GCGATATACAAGCTAAGGTACAAGAGGCCATTGCCCTACAAAAAGATGGGCGTGAATCAC 1543 ||||||||||||||||||||||| ||||||||| |||||| ||| ||||||||||||||| Sbjct 1495 GCGATATACAAGCTAAGGTACAAAAGGCCATTGGCCTACACAAATATGGGCGTGAATCAC 1554 Query 1544 TTGGAGCAGCTCTTTGACAAGTTCAGGGATGTTGTTGCCATATATGAAGATCCAGCTACA 1603 ||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||| Sbjct 1555 TTGGAGCAGCTCTTTGACAAGTTAAGGGATGTTGTTGCCATACATGAAGATCCTGCTACA 1614 Query 1604 GGGAGGAAACTCATCAACCCGGTTTAGGGGAGCCTAACTCAG-GTTCATATAAGATCAGA 1662 |||||||||||||||| ||||||||| |||||||||||||| || |||||||||||||| Sbjct 1615 GGGAGGAAACTCATCAGCCCGGTTTAAAGGAGCCTAACTCAGAGT-CATATAAGATCAGA 1673 Query 1663 CTTCAGACGGTGCGTTTGTGAGCCGTTTCTATGCGTTCTCTATCACTCACTGGGGACAAG 1722 | | | ||||||||||||| |||| || ||||||||||||||| ||||||||| Sbjct 1674 C----G--G-TGCGTTTGTGAGCTGTTTATAAGCGTTCTCTATCACT----GGGGACAAG 1722 Query 1723 CAATGTAAGCTCCTTGCCTGAGAAGCTCTCAGTATTAATGTATATGCTCTCTACTCTTTC 1782 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1723 CAATGTAAGCTCCTTGCCTAAGAAGCTCTCAGTATTAATGTATATGCTCTCTACTCTTTC 1782 Query 1783 CTTAGGACAAAATGTTTACACGGAAGCTTTGATTCTGCATTGCAAGCATTTCACTTCTGT 1842 ||| ||||||||||||| | |||||||| ||||||||||||||||||||||||||||||| Sbjct 1783 CTTGGGACAAAATGTTTTCGCGGAAGCTATGATTCTGCATTGCAAGCATTTCACTTCTGT 1842 Query 1843 TACTTTCGAGAAATTGGAAAGAAGTCAGACGGAACGTTTTATG 1885 |||||||||| ||||||||| |||||||||||| ||||||||| Sbjct 1843 TACTTTCGAGCAATTGGAAATAAGTCAGACGGAGCGTTTTATG 1885 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 95230433865 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5