BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480480
Length=3107
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19930.1 | Symbols: | RNA-dependent RNA polymerase family p... 4678 0.0
AT2G19910.1 | Symbols: | RNA-dependent RNA polymerase family p... 2158 0.0
AT2G19920.1 | Symbols: | RNA-dependent RNA polymerase family p... 1977 0.0
> AT2G19930.1 | Symbols: | RNA-dependent RNA polymerase family
protein | chr2:8607340-8612441 REVERSE LENGTH=3127
Length=3127
Score = 4678 bits (2533), Expect = 0.0
Identities = 2914/3092 (94%), Gaps = 49/3092 (2%)
Strand=Plus/Plus
Query 22 GCTTCTACGAGG-TCAAGGATCGCTCTTTCGGGTCGGATTGAAACAGCTTTAGAGAATAT 80
|||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10 GCTTCTTCGAGGAT-AAGGATCGCTCTTTCGGGTCGGATTGAAACAGCTTTAGAGAATAT 68
Query 81 CTACAGAAAATTTAATCTTACTCCGATTAATGATGAGACGAGACAGAGACTGTCTTCCAT 140
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 69 CTACAGAAAACACAATCTTACTCCGATTAATGATGAGACGAGACAGAGACTGTCTTCGAT 128
Query 141 TCCTGAGAATTTGGGTTTTGAGTTGGTCAGGAACGTTTTTAGTTTGCAGGCTGGTTTGAT 200
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 129 TCCTGAGAATTTGGGTTTTGAGTTGGTCAGGAAAGTTTTTAGTTTGCAGGCTGGTTTGAT 188
Query 201 ATACAATCTCGACAGCTTCATCGTTTCTAAAGTTAACCAATCCGTTAATTTTACTGGCTA 260
|||||| ||||||||||||||||||||||| ||||||||| |||||| ||||||||||||
Sbjct 189 ATACAACCTCGACAGCTTCATCGTTTCTAAGGTTAACCAAGCCGTTAGTTTTACTGGCTA 248
Query 261 TCCACGGCTGAGCTCAGGTGTGTCTCCGGCGAACTCTCGTAGTCCCTCTGGAAGACACGT 320
| | | | || | ||||||||||||| ||| |||||||||||||||||
Sbjct 249 T---C--C--A---CA-----G---CCGGCGAACTCTCTTAGCCCCTCTGGAAGACACGT 290
Query 321 GTGCAGGGTTCTTCAAGAAGAGATGTCTGTTGATTCTGATGCTCCTTCTCCTAAGTCTTT 380
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 291 GTCCAGGGTTCTTCAAGAAGAGATGTCTGTTGATTCTGATGCTCCTTCTCCTAAGTCTTT 350
Query 381 GAAAAGTGAAGA-AAATGGAGGATCTCTGCACATTCCACAGCTGGTAGCTTTGGGTGAAC 439
|||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct 351 GAAAAGTGAAGACAAA-GGAGGATCTCTGCACATTCCCCAGCTGGTAGCTTTGGGTGAAC 409
Query 440 TTGAATTTAAGAAGGCGTTTTTGTTACTTAGCTATATTCCAGGGCAACAACTGGGCCAGG 499
||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||
Sbjct 410 TTGAATTTAAGAAGGTGTTTTTGTTACTTAGCTATATTCCAGGGCAACATGTGGGCCAGG 469
Query 500 TTACAACTGCTGATGAGATTCGACTATGGAAAGATTTGCCAATGGTTGCATATGAAGCAG 559
||| |||||||||||||||| |||| |||||||||||||||||||||| |||||||||||
Sbjct 470 TTATAACTGCTGATGAGATTAGACTGTGGAAAGATTTGCCAATGGTTGAATATGAAGCAG 529
Query 560 CCGTTTGGGACCGTTTGGGCCGGCATTATTGTCCTCAGACA-GACCGAAGAGTGTTGCAA 618
| ||||||||||| |||||||||||||||||||| || | | ||||||||| ||||||||
Sbjct 530 CGGTTTGGGACCGCTTGGGCCGGCATTATTGTCCCCA-AAAGGACCGAAGAATGTTGCAA 588
Query 619 TGGGATAGTGGCAAGACCCATTACTATCAGTGTCATGTTGCTCCCGATGGTAGCTACACA 678
|||||||| || ||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct 589 TGGGATAGCGGGAAGACCCATTACTATCAGTGTAATGTTGCTCCCAATGGTAGCTACACA 648
Query 679 TTCAAGG--------G-----C----CCC-CTTCTTGAACACACTGGAACACACTTGCAC 720
||||||| | | ||| ||||||||||||||||||||||||||||||
Sbjct 649 TTCAAGGTTCTTTCAGCTCTTCAAGGCCCTCTTCTTGAACACACTGGAACACACTTGCAC 708
Query 721 AAGGTCTTGGGTGATGAAAATGTTTTAACTGTCAAATTCGCGGATGTCCCGAAAAACTCA 780
||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| |||
Sbjct 709 AAGGTCTTGGGTGATGATAATGTTTTAACCGTCAAATTCGCGGATGTCCAGAAAAGTTCA 768
Query 781 TCAACATATAGCAATGACCGTTATTTTACATACAAAGAAATTGCCAAGAACGGTATCATG 840
||||||||||||| ||||| ||| ||||||||||||| |||||||||||||||||||||
Sbjct 769 TCAACATATAGCATTGACCATTACTTTACATACAAAGGGATTGCCAAGAACGGTATCATG 828
Query 841 ATTGGTTTACGTCGTTATCAGTTTTTTGTTTTCAAAGATGGAGGAAAAGAGGAAAAGAAG 900
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 829 ATTGGTTTACGTCGTTATCAATTTTTTGTTTTCAAAGATGGAGGAAAAGAGGAAAAGAAG 888
Query 901 AAAGATCTTTCTACAAAGAAAGTGAAATGCTACTTTATACGCACGGGCTCTACAGCTTCT 960
|||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| |
Sbjct 889 AAAGATCTTTCTACAAAGAAAGTGAAATGCTACTTTATACGCACGGACTCAACAGCTTTT 948
Query 961 TGTGATATGGAAAATCCCTATATTTTTACTGGAAAGTCAATTCACGAAGCTCGTATGCAT 1020
| ||||||| |||||||||||||||| || |||||||||||| | |||||||||||||||
Sbjct 949 TATGATATGCAAAATCCCTATATTTTAACCGGAAAGTCAATTTATGAAGCTCGTATGCAT 1008
Query 1021 TTTATGCACGTGCATCGAGCACCAACTTTGGCGAATTATATGGCAAGGTTTTCCTTAATT 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1009 TTTATGCACGTGCATCGAGCACCAACTTTGGCGAATTATATGGCAAGGTTTTCCTTAATT 1068
Query 1081 CTCTCAAAGACTAAAACGCTTGAAGTTGACATGACTGGGATTACCTTTGATCCAATTGAT 1140
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1069 CTGTCAAAGACTAAAACGCTTGAAGTTGACATGACTGGGATTACCTTTGATCAAATTGAT 1128
Query 1141 GATATACACTGCCATGATCAAGATGGGAAAGATGTTCTTGACAAGAACAAAAAACCTTGT 1200
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 GATATACACTGCCATGATCAAGATGGGAAAGATGTTCTTGACAAGAACAAAAAACCTTGC 1188
Query 1201 ATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCCCTAAAT 1260
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1189 ATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTGGCTCGGATGTGTCCCCTAAAT 1248
Query 1261 ATATTTAAAGGGAAATGTCTCAGAAGTGAAAATATTCAGGAAGCTTGTAACCAAGACCCG 1320
||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||||
Sbjct 1249 ATATTTAAAGGGAAATGTCTCAGAAGTGAAAGTATTCAGGAAGCATGTTACCAAGACCCG 1308
Query 1321 CCTCTTTTGATCCAGTTTCGGATGTTTTATGATGGCTATGCTGTTAAGGGAACTTTTCTC 1380
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1309 CCTCTTTTGATCCAGTTTCGGATGTTTTATGATGGTTATGCTGTTAAGGGAACTTTTCTC 1368
Query 1381 TTAAACAAGAAACTTTGTCCTCGGACTGTCCAGGTTCGACCTTCGATGATCAAGGTGTCT 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1369 TTAAACAAGAAACTTTGTCCTCGGACTGTCCAGGTTCGACCTTCGATGATCAAGGTGTCT 1428
Query 1441 AAAGATCCCTCATTGTCAAATTTTAGCACCTTTAACGCTTTGGAGGTAGTAACTACAAGT 1500
|||||||| || ||||| |||||||||||||||||||| ||||| |||||||| ||||||
Sbjct 1429 AAAGATCCATCCTTGTCCAATTTTAGCACCTTTAACGCCTTGGAAGTAGTAACCACAAGT 1488
Query 1501 AATCCACCAAGAAGAACAAAGCTATCAAAAAATTTGGTTGCGCTGCTTAGCTATGGAGGA 1560
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1489 AATCCACCAAAAAGAACAAAGCTATCAAAAAATTTGGTTGCGCTGCTTAGCTATGGAGGA 1548
Query 1561 ATCCCTAATGAATTCTTTTTGGATATATTGCTCAACACGCTGGAAGAGTCTAAAAGCATA 1620
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1549 ATCCCTAATGAATTCTTTTTGGATATATTGCTCAACACGTTGGAAGAGTCTAAAAGCATA 1608
Query 1621 TTCTACAACAAACATGCTGCGCTTAATGTTGCTCTTAATTATGGGGAAATGGACGACCAG 1680
||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 1609 TTCTACAACAAACGTGCTGCACTTAATGCTGCTCTTAATTATGGGGAAATGGACGACCAG 1668
Query 1681 AACGCCGCACAGATGATATTGGTTGGTATCCCCCTTGACGAACCACACTTGAAGAATCAT 1740
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||
Sbjct 1669 AACGCCGCACAGATGATATTGGTTGGTATCCCCCTTGATGAACCACACTTGAAGAATTAT 1728
Query 1741 CTGTCTATTCTTCTAAAGACAGAGAAAAATGATCTCAAAGCAGGAAGACTTCCTGTGACC 1800
|||||||| ||| ||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1729 CTGTCTATACTTTTAAAGACAGAGAAAAATGATCTCAAAGCAGGAAAACTTCCTGTGACC 1788
Query 1801 GAATCATACTATCTCATGGGGACAGTGGATCCCACTGGAGAGCTAAAGGAAGATGAAGTC 1860
|||||||||||||| ||||| |||||||||||||| |||| |||||||||||||||||||
Sbjct 1789 GAATCATACTATCTTATGGGAACAGTGGATCCCACCGGAGCGCTAAAGGAAGATGAAGTC 1848
Query 1861 TGTGTAATCCTTGAGTCTGGGCAAATTTCGGGAGAAGTGTTAGTTTATAGAAATCCTGGA 1920
|||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 1849 TGTGTAATTCTTGAGTCTGGGCAAATTTCGGGAGAAGTTTTAGTGTATAGAAATCCTGGA 1908
Query 1921 TTACATTTTGGAGACATACATATTCTCAAGGCTACATATGTTAAGGCCTTGGAAGAGTAT 1980
|||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||||
Sbjct 1909 TTACATTTTGGAGACATACATATTCTTAAGGCCACATATGTCAAGGCCTTGGAAGAGTAT 1968
Query 1981 GTTGGAAATTCCAAGTATGCTGTGTTCTTCCCTCAGAAAGGTCCAAGATCCTTGGGCGAC 2040
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1969 GTTGGAAATTCCAAGTTTGCTGTGTTCTTCCCTCAGAAAGGTCCAAGATCCTTGGGGGAC 2028
Query 2041 GAGATTGCAGGTGGTGACTTTGATGGTGATATGTATTTCATATCAAGAAACCCTGAGCTG 2100
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2029 GAGATTGCAGGTGGTGACTTTGATGGTGATATGTATTTCATATCAAGAAACCCTGAGCTA 2088
Query 2101 CTTGAACACTTCAAACCAAGTGAACCGTGGGTGAGTTTGACTCCTCCCAGTAAAAGTAAC 2160
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2089 CTTGAAAACTTCAAACCAAGTGAACCGTGGGTGAGTTTGACTCCTCCCAGTAAAAGTAAC 2148
Query 2161 TCTGGTAGAGCGCCAAGCCAGCTTTCACCAGAAGAGTTGGAAGAAGAACTTTTCGAAATG 2220
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2149 TCTGGTAGAGCGCCAAGCCAGCTTTCCCCAGAAGAGTTGGAAGAAGAACTTTTCGAAATG 2208
Query 2221 TTCCTGAAGGCAGGATTTCATGCCAGCAATGTTATAGGGATAGCTGCAGATAGCTGGTTA 2280
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2209 TTCCTGACTGCAGGATTTCATGCCAGCAATGTTATAGGGATAGCTGCAGATAGCTGGTTA 2268
Query 2281 ACAATAATGGACCGCTTCCTAATACTAGGAGATGAGAGAGCTGAGGAAAAAGCTGAAATG 2340
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct 2269 ACAATAATGGACCGCTTCCTCATACTAGGAGATGACAGGGCTGAGGAAAAAGCTGAAATG 2328
Query 2341 AAGAAGAAAATGCTAAAGCTGATTGATATATACTATGATGCTCTTGATGCACCAAAGAAA 2400
|||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2329 AAGAAGAAGATGCTTGAGCTGATTGATATATACTATGATGCTCTTGATGCACCAAAGAAA 2388
Query 2401 GGGGATAAGGTCTATCTTCCAAACGAGCTGAGGCCCGACATCTTTCCACATTACATGGAG 2460
|||||||| ||||| || |||||| |||||| ||| ||||||||||||||||||||||||
Sbjct 2389 GGGGATAAAGTCTACCTCCCAAACAAGCTGAAGCCTGACATCTTTCCACATTACATGGAG 2448
Query 2461 CGGGAGAAAAAGTTCAAGTCCACTTCTATTCTTGGATTAATCTATGACTTTGTTAAATCA 2520
||||| ||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2449 CGGGATAAAAAATTCCAGTCCACTTCTATTCTTGGATTAATCTTTGACTTTGTTAAATCA 2508
Query 2521 CAGACAACAGAGGAACCCACACCATCATCTGAGATCAGTAAACTCCCCTGTTTCGAAGAT 2580
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 2509 CAGACAACAGAGGAACCCTCACCATCATCTGAGATCAGTAAACTCCCGTGTTTCGAAGAT 2568
Query 2581 GAGCCGGTCTCAGAGTTTCATATGGAGAAATGTAGACGGTGGTATGATAATTACAGAACT 2640
||||||||||| |||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 2569 GAGCCGGTCTCCGAGTTTCATATGCAGAAATGTAGACTGTGGTATGATAATTACAGAACT 2628
Query 2641 GAGATGACCCAGGCGATGAAAACTGATAAGGATGAATCAGCCAATGAAGTTATTCAGAGA 2700
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2629 GAGATGACACAGGCGATGAAGACTGATAAGGATGAATCAGCCAATGAAGTTATTCAGAGA 2688
Query 2701 TACAAGCAGGAGTTCTATGGTGCTGCAGGGTTTGAAGACAGCAAGAAAAGTCTGGAAGAA 2760
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2689 TACAAGCAGGAGTTCTATGGCGCTGCAGGGTTTGAAGACAGCAAGAAAAGTCTGGAAGAA 2748
Query 2761 CTCTATCCGCAAGCCCTCGCACTGTACAAGATCGTTTACGATTATGCCATTCATGCAGGT 2820
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2749 CTCTATCCGCAAGCTCTCGCACTCTACAAGATCGTTTACGATTATGCCATTCATGCAGGT 2808
Query 2821 GTTTCGAAATGTGGGTTTGTCTGGAAGGTAGCAGGACCGGTACTGTGCAGATTCTATCTA 2880
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2809 GTTTCGAAATGCAGGTTTGTCTGGAAGGTAGCAGGACCGGTACTGTGCAGATTCTATCTA 2868
Query 2881 A-TGAAGAAAATGCAGGAGAAATCTTTAGTGTGTGCACCATCTGTGCTTAAAGAGCTTTG 2939
| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2869 AAT-AAGAAAATGCAGGAGAAATGTTTAGTGTGTGCACCATCTGTGCTTAAAGAGCTTTG 2927
Query 2940 GGGTTGAAGAATACAAGCCTTTGTTGTTGCTTCAGTGTCTAATAA---GAAGCGTATGAG 2996
||||||||||||||||||||||||||||||| || |||||||||| ||||||||||||
Sbjct 2928 GGGTTGAAGAATACAAGCCTTTGTTGTTGCTACA-TGTCTAATAATAAGAAGCGTATGAG 2986
Query 2997 GCAAGTAACTTAACTAATAGAAGCCAAGATGTGTGTATTGTAGTGCCTTT-GGTTTGGTT 3055
|||||||| ||||||||||| |||||||||||||| ||||||||||||| |||||||||
Sbjct 2987 GCAAGTAAGTTAACTAATAGGTGCCAAGATGTGTGTGTTGTAGTGCCTTTTGGTTTGGTT 3046
Query 3056 TTAATGTAGATTTGTTCTCTAATGAATATTTT 3087
||||||||||||| | |||| ||||||||||
Sbjct 3047 TTAATGTAGATTTCTCCTCTGGTGAATATTTT 3078
> AT2G19910.1 | Symbols: | RNA-dependent RNA polymerase family
protein | chr2:8595820-8600757 REVERSE LENGTH=2979
Length=2979
Score = 2158 bits (1168), Expect = 0.0
Identities = 2218/2709 (82%), Gaps = 135/2709 (5%)
Strand=Plus/Plus
Query 322 TGCAGGG-TTCTTCAAGAAGAGATGTCTGTTGATTCT-GATGCTCCTTCTCCTAAG-TCT 378
||||||| ||| ||||| | | ||||| |||||| | || |||| ||||||||| ||
Sbjct 322 TGCAGGGCTTC-TCAAG-A-TG-TGTCTCTTGATT-TGGAAACTCCCTCTCCTAAGTTC- 375
Query 379 TTGAAAAGTGAAGAAAATGGAGGATCTCTGCACATTCCACAGCTGGTAGCTTTGGGTGAA 438
||||||| ||||||||||| |||||| | ||||||| | ||| ||||||||||||||
Sbjct 376 ATGAAAAGAGAAGAAAATGGTGGATCTAAGTACATTCCTCCGCTTTTAGCTTTGGGTGAA 435
Query 439 CTTGAATTTAAGAAGGCGTTTTTGTTACTTAGCTATATTCCAGGGCAA-CAAC-TG--G- 493
|||||||| |||||||||||| |||| |||||||||||| |||| || | | || |
Sbjct 436 CTTGAATTCAAGAAGGCGTTTCTGTTGCTTAGCTATATTGGAGGGGAATC-CCTTGTTGA 494
Query 494 GCCAGGTTACAACTGCTGATGAGATTC-GACTATGGAAAGATTTGCCAATGGTTGCATAT 552
| |||||| | ||| |||| ||| || || |||||| ||||||||||||||| |||||
Sbjct 495 G-GAGGTTATATCTGGTGATCAGA-TCAGAAAATGGAAGGATTTGCCAATGGTTTCATAT 552
Query 553 GAAGCAGCCGTTTGGGACCGTTTGGGCCGGCATTATTG-T-CCTCAGACAGACCGAAG-A 609
|||||||| |||||| |||| ||||| | || |||||| | || || | || ||||| |
Sbjct 553 GAAGCAGCGGTTTGGAACCGGTTGGGACAGCGTTATTGTTCCCCCA-A-GGAGCGAAGAA 610
Query 610 -G--TGTTGCAATGGGATAGTGGCAAGACCCATTACTATCAGTGTCATGTTGCTCCCGAT 666
| ||| || |||||||||| | ||||||||||||||| |||||||||||| |||||
Sbjct 611 GGCCACTTG-AAGGGGATAGTGGGATGACCCATTACTATCAATGTCATGTTGCTACCGAT 669
Query 667 GGTAGCTACACATTCAAGGGCCCCCTTCTTGA-ACACACTGGAACACACTTGCACAAGGT 725
||||| |||| ||||||||| | ||||| || | |||||||||||||| ||||||||||
Sbjct 670 GGTAGTTACAAATTCAAGGGTCATCTTCTGGAGA-ACACTGGAACACACCTGCACAAGGT 728
Query 726 CTTGGGTGATGAAAATGTTTTAACTGTCAAATTCGCGGATGTCCCGAAAAAC-TCATCAA 784
||||||||||| || ||| ||||||||||||| | | || | | | | ||
Sbjct 729 TTTGGGTGATGATAACGTTCTAACTGTCAAATTTGATAAAGT---GTTAGGCGT-GGAAA 784
Query 785 CATATAGCAATGACCGTTATTTTACATACAAAGAAATTGCCAAGAACGGTATCATGATTG 844
| ||| | ||||||| ||| | ||||||||||| ||||| ||||| ||||||||| |||
Sbjct 785 CCTATTGTAATGACCTTTACTCTACATACAAAGGGATTGCTAAGAATGGTATCATGGTTG 844
Query 845 GTTTACGTCGTTATCAG-TTTTTTGTTTTCAAAGATGGAGGAAAAGAGGAAAAGAAGAAA 903
| ||||| ||||||| | ||||||||||||||||||||||| ||||| || |||||||||
Sbjct 845 GGTTACGCCGTTATC-GATTTTTTGTTTTCAAAGATGGAGGGAAAGAAGAGAAGAAGAAA 903
Query 904 GATCTTTCTACAAAGAAAGTGAAATGCTACTTTATACGCACGGGCTCTACAGCTTC-TTG 962
||| ||||||||||| ||| |||||||||||||||||||| | ||| |||||||| |
Sbjct 904 GATGTTTCTACAAAGGGAGTTAAATGCTACTTTATACGCACAGACTCGACAGCTTCAAT- 962
Query 963 TGATATGGAAAATCCCTATATTTTTACTGGAAAGTCAATTCACGAAGCTCGTATGCATTT 1022
||||||| ||||||||||||| || | ||||||||||| || ||||| |||||||||||
Sbjct 963 TGATATGCAAAATCCCTATATCTTCGCCGGAAAGTCAATGCATGAAGCACGTATGCATTT 1022
Query 1023 TATGCACGTGCAT-CGAGCACCAACTTTGGCGAATTATATGGCAAGGTTTTCCTTAATTC 1081
|||||| ||| || | || ||||| | || |||||| |||||||||| |||||||
Sbjct 1023 TATGCATGTGAATAC-TTTGTCATCTTTGCCCAACTATATGTCAAGGTTTTCTTTAATTC 1081
Query 1082 TCTCAAAGACTAAAACGCTTGAAGTTGACATGACTGGGATTACCTTTGATCCAATTGATG 1141
| ||||||||||||||||| ||||||||||||||||| ||||||||||| | ||| ||||
Sbjct 1082 TGTCAAAGACTAAAACGCTCGAAGTTGACATGACTGGAATTACCTTTGAGCAAATCGATG 1141
Query 1142 ATATACACTGCCATGATCAAGATGGGAAAGATGTTCTTGACAAGAACAAAAAACCTTGTA 1201
|||||||||||||||||||||||| || ||||||||||||||||| ||||||||||
Sbjct 1142 ATATACACTGCCATGATCAAGATGATAAGGATGTTCTTGACAAGAATGGGAAACCTTGTA 1201
Query 1202 TACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCCCTAAATA 1261
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1202 TACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCAGTTAATA 1261
Query 1262 TATTTAAAGGG-AA---AT-----GT--C-----TC--AG-AAG--TGAAAATATT-CAG 1299
| ||||||||| || || || | || || ||| | |||| || ||
Sbjct 1262 TTTTTAAAGGGAAATCTATGAGAAGTAACAATATTCAGAGTAAGAATTTAAATTTTGAAG 1321
Query 1300 GA-A--G--CTTGTAACCAAGACCCGCCTCTTTTGATCCAGTTTCGGATGTTTTATGATG 1354
|| | | | ||| |||||| |||||||| |||||||||||||||| |||||| |||
Sbjct 1322 GACAGGGACCATGTGGCCAAGAGCCGCCTCTGCTGATCCAGTTTCGGATTTTTTATAATG 1381
Query 1355 GCTATGCTGTTAAGGGAACTTTTCTCTTAAACAAGAAACTTTGTCCTCGGACTGTCCAGG 1414
|||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 1382 GCTATGCTGTTAAGGGAACTTTTCTCACAAACAAGAAACTTCCTCCTCGGACTGTCCAGG 1441
Query 1415 TTCGACCTTCGATGATCAAGGTGTCTAAAGATCCCTCATTGTCAAATTTTAGCACCTTTA 1474
|||||||||| ||||||||||||| | |||||| | ||||||||| |||| |||||||
Sbjct 1442 TTCGACCTTCTATGATCAAGGTGTATGAAGATCGAACCTTGTCAAATCTTAGTACCTTTA 1501
Query 1475 ACGCTTTGGAGGTAGTAACTACAAGTAATCCACCAAG-AAGAACAAAGCTATCAAAAAAT 1533
|| | ||||||||||| |||||||||||||||||||| ||| | | |||||||| ||||
Sbjct 1502 ACTCCTTGGAGGTAGTCACTACAAGTAATCCACCAAGAAAG-GCGAGGCTATCAAGAAAT 1560
Query 1534 TTGGTTGCGCTGCTTAGCTATGGAGGAATCCCTAATGAATTCTTTTTGGATATATTGCTC 1593
||||| ||||| ||||| ||||||||| |||||||||| ||||||||| ||||||||| |
Sbjct 1561 TTGGTGGCGCTACTTAGTTATGGAGGAGTCCCTAATGACTTCTTTTTGAATATATTGCGC 1620
Query 1594 AACACGCTGGAAGAGTCTAAAAGCATATTCTACAACAAACATGCTGCGCTTAATGTTGCT 1653
||||||||||||||||| |||| ||||||||||| ||| ||||||| |||| | |||
Sbjct 1621 AACACGCTGGAAGAGTCCAAAACCATATTCTACAGTGAACGTGCTGCGTTTAAAGCTGC- 1679
Query 1654 C-TTAATTATGGGGAAATGGACGACCAGAACGCCGCACAGATGATATTGGTTGGTATCCC 1712
| |||||||| || |||||||||| || | ||| | ||||| ||||||||||||||
Sbjct 1680 CATTAATTAT--GG----GGACGACCAGTACACTGCAGATATGATCTTGGTTGGTATCCC 1733
Query 1713 CCTTGACGAACCACACTTGAAGAATCATCTGTC-TATTCTTC-TAAAGACAGAGAAAAAT 1770
||||| |||||| |||||||| ||| ||| || || || || |||||||||||| |||
Sbjct 1734 TCTTGATGAACCATACTTGAAGGATCGTCTTTCTTA-TC-TCTTAAAGACAGAGAGGAAT 1791
Query 1771 GATCTCAAAGCAGGAAGACTTCCT-GTGACCGAATCATACTATCTCATGGGGACAGTGGA 1829
| ||||||||||||||| ||||| ||| ||||||||||||| ||||||| ||||||||
Sbjct 1792 GCTCTCAAAGCAGGAAGGTTTCCTATTGA-CGAATCATACTATATCATGGGCACAGTGGA 1850
Query 1830 TCCCACTGGAGAGCTAAAGGAAGATGAAGTCTGTGTAATCCTTGAGTCTGGGCAAATTT- 1888
|||||| || ||||| |||||| ||||| ||||||| ||||| | ||||| |||||||
Sbjct 1851 TCCCACCGGGGAGCTTAAGGAAAATGAAATCTGTGTCATCCTCCATTCTGGCCAAATTTC 1910
Query 1889 CGGGAGAAGTGTTAGTTTATAGAAATCCTGGATTACATTTTGGAGACATACATATTCTCA 1948
|||| || ||||||||||| ||||||||||||||||||||||||||||||||| | || |
Sbjct 1911 CGGG-GATGTGTTAGTTTACAGAAATCCTGGATTACATTTTGGAGACATACATGTACTTA 1969
Query 1949 AGGCTACATATGTTAAGGCCTTGGAAGAGTATGTTGGAAATTCCAAGTATGCTGTGTTCT 2008
||||||| |||||||||||||| ||||| |||||||||||| |||||| |||||||||||
Sbjct 1970 AGGCTACCTATGTTAAGGCCTTAGAAGACTATGTTGGAAATGCCAAGTTTGCTGTGTTCT 2029
Query 2009 TCCCTCAGAAAGGTCCAAGATCCTTGGGCGACGAGATTGCAGGTGGTGACTTTGATGGTG 2068
||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |
Sbjct 2030 TCCCTCAGAAAGGTCCAAGATCCTTGGGCGATGAGATTGCTGGTGGTGACTTTGATGGCG 2089
Query 2069 ATATGTATTTCATATCAAGAAA-CCCTGAGCTGCTTGAACACTTCAAACCAAGTGAACCG 2127
|||||||||||||||| ||||| ||| |||| || ||||||||||| |||||||||||
Sbjct 2090 ATATGTATTTCATATCCAGAAATCCCA-AGCTACTGGAACACTTCAAGCCAAGTGAACCA 2148
Query 2128 TGGGTGAGTT-TGACTCCTCCCAGTAAAAGTAACTCTGGTAGAGCGCCAAGCCAGCTTTC 2186
|||||||||| | || || ||||||| | ||| ||| ||| |||||| | || ||
Sbjct 2149 TGGGTGAGTTCTT-CTAAACCTAGTAAAATTTACTGTGGAAGAAAGCCAAGTGAACTATC 2207
Query 2187 ACCAGAAGAGTTGGAAGAAGAACTTTTCGAAATGTTCCTGAAGGCAGGATTTCATGCCAG 2246
| |||||||||||||||||| || ||| |||||||| | || ||| ||||| | ||
Sbjct 2208 AGAAGAAGAGTTGGAAGAAGAGCTATTCAAAATGTTCTTAAAAGCAAGATTTTGTAAGAG 2267
Query 2247 CA-ATGTTATAGGGATAGCTGCAGATAGCTGGTTAACAATAATGGACCGCTT-CCTAATA 2304
| | ||||||||||| ||||||||| ||||| || ||||||||||| ||| ||| |
Sbjct 2268 -AGACGTTATAGGGATGGCTGCAGATTGCTGGCTAGGAATAATGGACC-CTTTCCTCAC- 2324
Query 2305 CT-AGGAGATGAGAGAGCTGAGGAAAAAGCTGAAATGAAGAAGAAAATGCTAAAGCTGAT 2363
|| |||||||||||| ||| |||||||| ||||| ||||||||| || || ||| ||||
Sbjct 2325 CTTAGGAGATGAGAGTGCTAAGGAAAAATATGAAAGGAAGAAGAATATTCTTAAGTTGAT 2384
Query 2364 TGATATATACTATGATGCTCTTGATGCACCAAAGAAAGGGGA-TAAGGTCT-ATCTTCCA 2421
||||||||||||||||||||||||||||||||| ||||||| |||||| | |||| ||
Sbjct 2385 TGATATATACTATGATGCTCTTGATGCACCAAA-AAAGGGGGCTAAGGT-TGATCTCCCG 2442
Query 2422 AACGAGCT-GAGGCCCGACATCTTTCCACATTACATGGAGCGGGAGA--AA-A-AG-TT- 2474
||| || ||| | | || |||||||||||||||||||| || || | || ||
Sbjct 2443 CCCGATCTAGAGATCAAAAAT-TTTCCACATTACATGGAGCGTGACCCTAAGAGAGATTT 2501
Query 2475 CAAGTCCACTTCTATTCTTGGATTAATCTATGACTTTGTTAAATCACAGACAA-CAGAGG 2533
|| |||||||||||||||||||||||||| |||| ||| | || || | | ||||||
Sbjct 2502 CAGGTCCACTTCTATTCTTGGATTAATCTTTGACACTGTGGATTCTCATA-ATGCAGAGG 2560
Query 2534 AACCCACACCATCATCTGAGATCAGTAAACTCCCCTGTTTCGAAGATGAGCCGGTCTC-A 2592
||||| ||||||| | || |||||||||||| | ||| |||||||| |||||| | |
Sbjct 2561 AACCCCCACCATC-T--GAAATCAGTAAACTCTGGTATTTTGAAGATGAACCGGTCCCTA 2617
Query 2593 GAGTTTCATATGGAGAAATGTAGA-CGGTGGTATGATAATTACAGAACTGAGATGACCCA 2651
||| ||| ||||| |||| || | | ||||| || |||||| ||| ||| ||| ||||
Sbjct 2618 -AGTCTCACATGGATAAATTTACATCC-TGGTACGAGAATTACCGAAGTGAAATGTCCCA 2675
Query 2652 GGCGATGA---AAACTGATAAGGAT--GA--A-TCAG----CCAATGAAGTTATTCAGAG 2699
||||||| |||||||||||| | || | ||| ||||||||||||| |||||
Sbjct 2676 AGCGATGATGGAAACTGATAAGGTTAAGAGGAATCAATTAACCAATGAAGTTATCCAGAG 2735
Query 2700 ATACAAGCAGGAGTTCTATGGTGCTGCAGGGTTTGAAGACAGCAAGAAAAGTCTGGAAGA 2759
||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 2736 GTACAAGCAGGATTTCTATGGCGCTGCAGGGTTTGAAGACAGCAATAAAAGTCTGGAAGA 2795
Query 2760 ACTCTATCCGCAAGCCCTCGCACTGTACAA-GATCGTTTACGATTATGCCATTCATGCAG 2818
|||||| || |||||| | ||||| ||||| | |||||||||||||||||||||| | ||
Sbjct 2796 ACTCTACCCCCAAGCCTTGGCACTCTACAACG-TCGTTTACGATTATGCCATTCAGGAAG 2854
Query 2819 GTGTTTCGAAATGTGGGTTTGTCTGGAAGGTAGCAGGACCGGTACTGTGCAGATTCTATC 2878
||||| |||||||| |||| |||||| || ||||||||||| ||||||| ||| || |
Sbjct 2855 GTGTTGCGAAATGTACATTTGCCTGGAATGTTGCAGGACCGGTCCTGTGCAAATTTTACC 2914
Query 2879 TAATGAAGAAAATGCAGGAGAAATCTTTAGTGTG-TGCACCATCTGTGCTTAAAGAGCTT 2937
| | ||||||| | |||| ||||| ||||| | | || | |||||||||||| |||||
Sbjct 2915 T--T-AAGAAAACGAAGGATAAATCAGTAGTG-GCTTCAACGTCTGTGCTTAAAAAGCTT 2970
Query 2938 TGGGGTTGA 2946
| |||||||
Sbjct 2971 TTGGGTTGA 2979
> AT2G19920.1 | Symbols: | RNA-dependent RNA polymerase family
protein | chr2:8602222-8606887 REVERSE LENGTH=2784
Length=2784
Score = 1977 bits (1070), Expect = 0.0
Identities = 2056/2517 (82%), Gaps = 128/2517 (5%)
Strand=Plus/Plus
Query 322 TGCAGGG-TTCTTCAAGAAGAGATGTCTGTTGATTC-TGATGCTCCTTCTCCTAAG-TCT 378
||||||| ||| ||||| |||| ||||| |||| || ||| | ||| ||||||||| ||
Sbjct 337 TGCAGGGCTTC-TCAAGCAGAGGTGTCTCTTGA-TCGTGAAGATCCGTCTCCTAAGTTC- 393
Query 379 TTGAAAAGTGAAGAAAATGGAGGATCTCTGCACATTCCACAGCTGGTAGCTTTGGGTGAA 438
|||| | | || |||||||||| |||| ||||||| | | || ||||||||||||||
Sbjct 394 TTGAGAGGAGATGAAAATGGAGAATCTAAGCACATTTCTCTTCTATTAGCTTTGGGTGAA 453
Query 439 CTTGAATTTAAGAAGGCGTTTTTGTTACTTAGCTATATTCCAGGGCAA-CAACTGGGCCA 497
|||||||| ||||||||||||||||| |||| |||| || |||| || | ||||| |
Sbjct 454 CTTGAATTCAAGAAGGCGTTTTTGTTGCTTACCTATCTTGGAGGGAAATC-TCTGGGTGA 512
Query 498 GGTTACAACTGCTGATGAGATTC-GACTATGGAAAGATTTGCCAATGGTTGCATATG-AA 555
||||| | ||| |||||||| || ||| |||||| |||||||||||||||||||||| ||
Sbjct 513 GGTTATATCTGGTGATGAGA-TCAGACAATGGAAGGATTTGCCAATGGTTGCATATGAAA 571
Query 556 GCAGCCGTTTGGGAC-CGTTTGGGCCGGCATTATTGTCCTCAGACAGACCGAA-G-AGTG 612
| ||| || ||| | | ||||| | || | | || || ||| | ||
Sbjct 572 G-AGCAGTGTGGTTCAAG-TTGGG-C--CA--A-----AAC-GA-GGAAAGAATGCAG-C 616
Query 613 TTGCAATGGGATAGTGGCAAGACCCATTACTATCAGTGTCATGTTGCTCCCGATGGTAGC 672
||| ||| |||||| || ||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 617 TTG-AATCGGATAGCGGGAAGACTCATTACTATCAATGTCATGTTGCTCCCGATGGTAGC 675
Query 673 TACACATTCAAGGGCCCCCTTCTTGA-ACACACTGGAACACACTTGCACAAGGTCTTGGG 731
|||| ||| ||||| |||| || | |||||||||||||| |||||||||| |||||
Sbjct 676 TACAGATTAAAGGGTTATTTTCTGGAGA-ACACTGGAACACACCTGCACAAGGTTTTGGG 734
Query 732 TGATGAAAATGTTTTAACTGTCAAATTCG--CGGATGTCCCGAAAAACTCA-TCAACATA 788
|||||| ||||||||||| || | ||||| | || | || ||| | ||||||||
Sbjct 735 TGATGATAATGTTTTAACCGTTAGATTCGATC-AAT-TACC---AAA-GGAGTCAACATA 788
Query 789 -TAGCAATGACCGTTATTTTACATACAAAGAAATTGCCAAGAACGGTATCATGATTGGTT 847
| | | ||| ||| | || ||||||||| ||||| ||||| ||||||||| ||||||
Sbjct 789 CT-GTGACAACCCTTACTCTAAATACAAAGAGATTGCTAAGAATGGTATCATGGTTGGTT 847
Query 848 TACGTCGTTATCAGTTTTTTGTTTTCAAAGATGGA-GGAAA--AGAGGAAAAGAAGAAAG 904
||||||||||||| |||||||| |||||||||||| ||||| |||| |||||||| ||
Sbjct 848 TACGTCGTTATCAATTTTTTGTCTTCAAAGATGGAGGGAAAGCAGAGAAAAAGAAG--AG 905
Query 905 ATCTTTCTACAAAGAAAGTGAAATGCTACTTTATACGCACGGGCTCTACAGCTTCTTGTG 964
| |||||||||| |||||||||||||||| ||||||||||| |||||||| || |||
Sbjct 906 A-AATTCTACAAAGCAAGTGAAATGCTACTTCATACGCACGGGTTCTACAGCATCCAGTG 964
Query 965 ATATGGAAAATCCCTATAT-TTTTACTGGAAAGTCAATTCACGAAGCTCGTATGCATTTT 1023
||||||| ||||| ||||| ||| | || | ||||||||| ||||||||||||||||||
Sbjct 965 ATATGGAGAATCCTTATATCCTTT-CCGGGATGTCAATTCATGAAGCTCGTATGCATTTT 1023
Query 1024 ATGCACGTGCAT-CGAGCACCAACTTTGGCGAATTATATGGCAAGGTTTTCCTTAATTCT 1082
||||| |||||| | | || || || || ||||||||||||||||| ||||||||
Sbjct 1024 ATGCATGTGCATAC-ATTGCCTTCTCCCGCCAACTATATGGCAAGGTTTTCTTTAATTCT 1082
Query 1083 CTCAAAGACTAAAACGCTTGAAGTTGACATGACTGGGATTACCTTTGAT-CCAATTGATG 1141
|||||||| |||| |||||||||||||||||||| ||||||| | || | ||| ||||
Sbjct 1083 GTCAAAGACAAAAAAGCTTGAAGTTGACATGACTGAGATTACC-GTCATGCAAATCGATG 1141
Query 1142 ATATACACTGCCATGATC-AAGATGGGAAAGATGTTCTTGACAAGAACAAAAAACCTTGT 1200
|||||||||||||||||| ||| | || ||||||||||| ||||| |||||| ||
Sbjct 1142 ATATACACTGCCATGATCAAAG-TAATAATGATGTTCTTGATAAGAATGGGAAACCTCGT 1200
Query 1201 ATACATTCAGATGGAACTGGCTACATCTCTGAGGACCTTGCTCGGATGTGTCCCCTAAAT 1260
||||| |||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1201 ATACACTCAGATGGAACTGGATACATCTCTGAGGACCTTGCTCGGATGTGTCCATTAAAT 1260
Query 1261 ATATTTAAAGGGAAATGTCTCAGAAGTGAA-AATATTCA-GGAAGCTTGTAACCAAGACC 1318
|| ||||||||||||| | | |||||| || |||||||| |||| | ||| |||||| |
Sbjct 1261 ATTTTTAAAGGGAAATCTATGAGAAGT-AACAATATTCAGGGAA-CCTGTGTCCAAGAGC 1318
Query 1319 CGCCTCTTTTGATCCAGTTTCGGATGTTTTATGATGGCTATGCTGTTAAGGGAACTTTT- 1377
||||||| ||||||| ||||||||||| ||||||||| |||||||||||||| ||||
Sbjct 1319 CGCCTCTGCTGATCCAAATTCGGATGTTTAATGATGGCTCTGCTGTTAAGGGAA-TTTTC 1377
Query 1378 CTCTTAAACAAGAAACTTTGTCCTCGGACTGTCCAGGTTCGACCTTCGATGATCAAGGTG 1437
|| ||||||||||| ||| ||| | ||| ||||||||||||||||| ||||||||||||
Sbjct 1378 CTATTAAACAAGAACCTTCCTCCACAGACCGTCCAGGTTCGACCTTCTATGATCAAGGTG 1437
Query 1438 TCTAAAGATCCCTCA-TTGTCAAATTTTAGCACCTTTAACGCTTTGGAGGTAGTAACTAC 1496
| ||||||| | ||||||||||||||||| |||||| | |||||||||| |||||
Sbjct 1438 TATAAAGAT-AAAAATTTGTCAAATTTTAGCACGTTTAACTCCCTGGAGGTAGTCACTAC 1496
Query 1497 AAGTAATCCACCAAGAAGAACAAAGCTATCAAAAAATTTGGTTGCGCTGCTTAGCTATGG 1556
|||||||||||||| |||| | |||||||| || ||||| || |||||||| ||||||||
Sbjct 1497 AAGTAATCCACCAAAAAGAGCGAAGCTATCGAAGAATTTAGTCGCGCTGCTGAGCTATGG 1556
Query 1557 AGGAATCCCTAATGAATTCTTTTTGGATATATTGCTCAACACGCTGGAAGAGTCTAAAAG 1616
|||| | || ||||| ||||||||||||||||||||||||||| ||||| || ||||
Sbjct 1557 AGGAGTGCCAAATGATTTCTTTTTGGATATATTGCTCAACACGTTGGAAAAGAAGAAAAC 1616
Query 1617 CATATTCTACAACA-AACATGCTGCGCTTAATGTTGCTCTTAATTATGGGGAA-ATGGAC 1674
|||||||| ||| | || ||| ||| ||| | ||| ||| ||||| ||||| ||||||
Sbjct 1617 CATATTCTTCAA-AGTACGTGCAGCGGGTAAAGCTGCACTTCATTAT-GGGAATATGGAC 1674
Query 1675 GACCAGAACGCCGCACAGATGAT-ATTGGTTGGTATCCCCCTTGACGAACCACACTTGAA 1733
|| ||||||| ||| ||||| | ||| ||||||||||||||| || ||| | |||||
Sbjct 1675 GATAAGAACGCTTTACAAATGATCA-TGGCTGGTATCCCCCTTGATGAGCCATATTTGAA 1733
Query 1734 GAATCATCTGTCTATTCTTC-TAAAGACAGAGAAAAATGATCTCAAAGCAGGAAGACTTC 1792
| || ||||||||| | || ||||| ||||||| |||||||||||||||||| |||||
Sbjct 1734 GCATTATCTGTCTAAAC-TCTTAAAGTTAGAGAAAGATGATCTCAAAGCAGGAAAACTTC 1792
Query 1793 CT-GTGACCGAATCATACTATCTCATGGGGACAGTGGATCCCACTGGAGAGCTAAAGGAA 1851
|| ||| |||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1793 CTATTGA-CGAATCATACTATCTCATGGGGACAGTGGATCCCACCGGAGAGCTAAAGGAA 1851
Query 1852 GATGAAGTCTGTGTAATCCTTGAGTCTGGGCAAATTTCGGGAGAAGTGTTAGTTTATAGA 1911
|||||||||| | | |||||| ||||| || ||| ||| ||||||| ||
Sbjct 1852 GATGAAGTCTC-G--------G-GTCTGGCCAAATCTCAGGAT--GTGCTAGTTTACAGG 1899
Query 1912 AATCCTGGATTACATTTTGGAGACATACATATTCTCAAGGCTACATATGTTAAGGCCTTG 1971
||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 1900 AATCCTGGACTACATTTTGGAGACATACATATTCTAAAGGCTACATATGTTAAATCCTTG 1959
Query 1972 GAAGAGTATGTTGGAAATTCCAAGTATGCTGTGTTCTTCCCTCAGAAAGGTCCAAGATCC 2031
||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct 1960 GAACAGTATGTTGGAAATTCCAAGTATGGTGTGTTCTTCCCTCAAAAAGGTCCAAGATCT 2019
Query 2032 TTGGGCGACGAGATTGCAGGTGGTGACTTTGATGGTGATATGTATTTCATATCAAGAAA- 2090
||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct 2020 TTGGGAGACGAAATTGCAGGTGGTGACTTTGATGGCGATATGTATTTCATATCCAGAAAT 2079
Query 2091 CCCTGAGCTGCTTGAACACTTCAAACCAAGTGAACCGTGGGTGAGTT-TGACTCCTCCCA 2149
||| |||| ||||| |||| ||| |||||||||||||||||||||| | |||| | |
Sbjct 2080 CCCA-AGCTACTTGAGCACTACAAGCCAAGTGAACCGTGGGTGAGTTCTT-CTCCACGTA 2137
Query 2150 GTAAAAGTAACTCTGGTAGAGCG-CCAAGCCAGCTTTCACCAGAAGAGTTGGAAGAAGAA 2208
|||||| | || |||||||| | ||||| | |||||||| ||| |||||||||||||
Sbjct 2138 GTAAAATTTACACTGGTAGA-CAACCAAGTGAACTTTCACCCGAACAGTTGGAAGAAGAG 2196
Query 2209 CTTTTCGAAATGTTCCTGAAGGCAGGATTTCA-TGCCAGCA-ATGTTATAGGGATAG-CT 2265
|||||| |||| ||| | ||| |||||||| | | ||||| | |||||||| | || ||
Sbjct 2197 CTTTTCAAAATCTTCTTAAAGACAGGATTT-AGTCCCAGCTCA-GTTATAGG-ACAGGCT 2253
Query 2266 GCAGATAGCTGGTTAACAATAATGGACCGCTTCCTAATACT-AGGAGATGAGAGA-GCTG 2323
|||||||||||| || ||||||||||||| ||||| | || ||||||||||| | | |
Sbjct 2254 GCAGATAGCTGGCTAGCAATAATGGACCGGTTCCTCAC-CTTAGGAGATGAGA-ATGTTA 2311
Query 2324 AGGAAAAAGCTGAAATGAAGAAGAAAATGCTAAAGCTGATTGATATATACTATGATGCTC 2383
||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 2312 AGGAAAAAGCTGAAATGAAGAAGAAAATGCTAAAGTTGACTGATATATACTATGATGCTA 2371
Query 2384 TTGATGCACCAAAGAAAGGGGA-TAAGGTCTATCTTCCAA-ACGA-GCTGA-GGCCCGA- 2438
||||||||||||| || ||||| | ||||| |||| || | || | | | || | ||
Sbjct 2372 TTGATGCACCAAA-AACGGGGACTGAGGTCAATCTCCCGTTA-GACG-TAAAGGTC-GAT 2427
Query 2439 CATCTTTCCACATTACATGGAGCGGGAGAAAA-AGTTCAAGTCCACTTCTATTCTTGGAT 2497
| | ||||||||||| |||||| || | |||| | |||||||||||||||||||||||||
Sbjct 2428 CTT-TTTCCACATTATATGGAGAGGAATAAAACA-TTCAAGTCCACTTCTATTCTTGGAT 2485
Query 2498 TAATCTATGACTTTGTTAAATCACAGACAA-CAGAGGA-ACCCACACCATCATCTGAGAT 2555
|||||| |||| ||| | | || | | ||||||| ||| |||||||| | || ||
Sbjct 2486 TAATCTTTGACACTGTGGATTTTCATA-ATGCAGAGGACACC-ACACCATC-TG-GA-AT 2540
Query 2556 CAGTAAACTCCCCTGTTTCGAAGATGAGCCGGTCTCAGAGTTTCATATGGAGAAATGTAG 2615
||||||||| | ||||| ||||||||||||||||| |||||| | |||||||||||||
Sbjct 2541 CAGTAAACTTCAGTGTTTTGAAGATGAGCCGGTCTCTGAGTTTGACATGGAGAAATGTAA 2600
Query 2616 ACGGTGGTATGATAATTACAGAACTGAGATGACCCAGGCGATGAAAACTGATAAGGATGA 2675
|| ||| | | ||||||||| |||||| || |||||||| | ||| | |||||
Sbjct 2601 ACTCTGGCACAAGGATTACAGAAAGGAGATGTGTCAAGCGATGAACTCAGATGATGATGA 2660
Query 2676 ATCA-GCCAATGAAGTTATTCAGAGATACAAGCAGGAGTTCTATGGTGCTGCAGGGTTTG 2734
|| | ||||||||||| |||| |||||||||||||||||| ||||||||||||||
Sbjct 2661 TTCCTGT-AATGAAGTTATCCAGAAATACAAGCAGGAGTTCTACAGTGCTGCAGGGTTTA 2719
Query 2735 AAGACAGCAAGAAAAGTCTGGAAGAACTCTATCCGCAA-G-CCCTCGCACTGTACAA 2789
|||| |||||||||| ||| ||||||||||| || ||| | |||| ||||| |||||
Sbjct 2720 AAGAAAGCAAGAAAATTCTAGAAGAACTCTA-CC-CAAAGGCCCTTGCACTTTACAA 2774
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 154514184440
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5