BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg480538 Length=580 Score E Sequences producing significant alignments: (Bits) Value AT2G19310.1 | Symbols: | HSP20-like chaperones superfamily pro... 845 0.0 > AT2G19310.1 | Symbols: | HSP20-like chaperones superfamily protein | chr2:8369794-8370406 REVERSE LENGTH=613 Length=613 Score = 845 bits (457), Expect = 0.0 Identities = 542/583 (93%), Gaps = 6/583 (1%) Strand=Plus/Plus Query 1 AGAGTAGAGAAGAAGAAGATGTCAATAATTCCGATCAGCAATCGCCGGAGACTCTCTCCC 60 ||| ||||||||||||||||||| || |||||||||||||||||||||||||| |||||| Sbjct 9 AGAATAGAGAAGAAGAAGATGTCGATGATTCCGATCAGCAATCGCCGGAGACTATCTCCC 68 Query 61 AGCGACAGAATCTGGGAACCATTTGAACTCATGAACACCTTTCTTGATTTCCCATCACCA 120 |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 69 GGCGATAGAATCTGGGAACCATTTGAACTCATGAACACCTTTCTTGATTTCCCATCACCA 128 Query 121 TCTCTCTTTCTTTCTCACCACTTTCCCTCACTTTCTCGAGAAATATTCCCATCAT-CTTC 179 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 129 GCTCTCTTTCTTTCTCACCACTTTCCCTCACTTTCTCGAGAAATATTCCCA-CAAACTTC 187 Query 180 ATCAACAACCGTCAAGACGCAGCTTAATTGGACTGAGACTCCGACGGCTCACGTTTTCAA 239 |||| | |||||||| |||||||| |||||||| |||||||||||||||||||||||||| Sbjct 188 ATCATCCACCGTCAATACGCAGCTCAATTGGACCGAGACTCCGACGGCTCACGTTTTCAA 247 Query 240 AGCGTATCTTCCGGGAGTGGCTCAAGACGAAGCGATAGTGTTCGTAGACGACGAAGGATA 299 |||||||||||||||||||| ||||||||||| ||| | ||||||||| || |||||||| Sbjct 248 AGCGTATCTTCCGGGAGTGGATCAAGACGAAGTGATTGCGTTCGTAGATGAAGAAGGATA 307 Query 300 TCTCCAGATCTGTACTGGCGACAACAAGTTCATGAGCAGATTTGAA-CTTCCTAACAACG 358 ||| ||||||||||||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 308 TCTTCAGATCTGTACTGGCGACAACAAGTTCATGAGCAGATTT-AAGCTTCCTAACAACG 366 Query 359 CCTTGAAGGATCAGGTCACGGCGTGGATGGAGGATGGGTTTCTTGTCGTGTTCGTTGCGA 418 |||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| || Sbjct 367 CCTTGACGGATCAGGTCACGGCGTGGATGGAGGACGAGTTTCTTGTCGTGTTCGTTGAGA 426 Query 419 AAGATGGTTCTTCTTCGCCGCCACCGCTACCGGAGATAGAGGAGAATCGTAACGTGAGAG 478 |||||| |||||| |||||||||| ||| |||||||| |||||||||||||||||||||| Sbjct 427 AAGATGCTTCTTCGTCGCCGCCACAGCTGCCGGAGATTGAGGAGAATCGTAACGTGAGAG 486 Query 479 TTGTGGAAATCACCGGCGATGATGATTAATCAAGTGTTAAATGTTGTCGAGATATGTATG 538 |||||||||||||||||||||||||||||| |||||||| ||||||||||||||| | || Sbjct 487 TTGTGGAAATCACCGGCGATGATGATTAATTAAGTGTTACATGTTGTCGAGATATATGTG 546 Query 539 AATTAAAGTGAAACTTACAAGTTTTA-TGTACTAAATGAACAA 580 |||||||| |||||||| |||||| | |||||||||||||||| Sbjct 547 AATTAAAGGGAAACTTAAAAGTTT-AGTGTACTAAATGAACAA 588 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 27879951585 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5