BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg480822
Length=3652
Score E
Sequences producing significant alignments: (Bits) Value
AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 | ch... 5160 0.0
AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 | ch... 1681 0.0
> AT2G19110.1 | Symbols: HMA4, ATHMA4 | heavy metal atpase 4 |
chr2:8278881-8286445 FORWARD LENGTH=3812
Length=3812
Score = 5160 bits (2794), Expect = 0.0
Identities = 3295/3539 (93%), Gaps = 25/3539 (1%)
Strand=Plus/Plus
Query 1 AAAATGGCGTCACaaaacaaagaagaagagaaaaagaaagtgaagaagttgcaaaagaGT 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 101 AAAATGGCGTTACAAAACAAAGAAGAAGAGAAAAAGAAAGTGAAGAAGTTGCAAAAGAGT 160
Query 61 TACTTCGATGTTCTCGGAATCTGTTGTACATCGGAAGTTCCTATCATCGAGAATATTCTC 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 161 TACTTCGATGTTCTCGGAATCTGTTGTACATCGGAAGTTCCTATAATCGAGAATATTCTC 220
Query 121 AAGTCACTTGACGGCGTTAAAGAATATTCCGTCATCGTTCCCTCGAGAACCGTGATCGTT 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 221 AAGTCACTTGACGGCGTTAAAGAATATTCCGTCATCGTTCCCTCGAGAACCGTGATTGTT 280
Query 181 GTTCACGACAGCCTCCTCATCTCTCCCTTCCAAATTGCTAAGGCATTGAACCAAGCTAGG 240
||||||||||| ||||||||||||||||||||||||||||||||| | ||| ||||||||
Sbjct 281 GTTCACGACAGTCTCCTCATCTCTCCCTTCCAAATTGCTAAGGCACTAAACGAAGCTAGG 340
Query 241 TTAGAAGCAAACGTGAGAGTAAACGGAGAAACAAACTTCAAGAACAAATGGCCAAGCCCT 300
||||||||||||||||| |||||||||||||| | |||||||||||||||||| ||||||
Sbjct 341 TTAGAAGCAAACGTGAGGGTAAACGGAGAAACTAGCTTCAAGAACAAATGGCCGAGCCCT 400
Query 301 TTCGCGGTGGTTTCCGGCATACTTCTCCTCCTCTCCTTCTTAAAGTTTGTCTACTCGCCT 360
||||| || ||||||||| ||||||||||||| |||||| ||||||||||||||||||||
Sbjct 401 TTCGCCGTAGTTTCCGGCTTACTTCTCCTCCTATCCTTCCTAAAGTTTGTCTACTCGCCT 460
Query 361 TTACGTTGGATTGCAGTCGCAGCAGTTGCCGCCGGTATATATCCGATACTTGCCAAAGCC 420
||||||||| | || || |||||||||||||||||||| |||||||| ||||||||||||
Sbjct 461 TTACGTTGGCTCGCCGTGGCAGCAGTTGCCGCCGGTATCTATCCGATTCTTGCCAAAGCC 520
Query 421 TTTGCTTCCATTAGAAGGCTTAGGCTCGACATCAACATATTGGTCATTATAACCGTGATA 480
||||||||||||| ||||| |||| |||||||||||||||||||||| |||||||||||
Sbjct 521 TTTGCTTCCATTAAAAGGCCTAGGATCGACATCAACATATTGGTCATAATAACCGTGATT 580
Query 481 GCAACACTTGCAATGCAAGATTTCATGGAGGCTGCAGCAGTTGTGTTCTTGTTCACCATA 540
|||||||||||||||||||||||||||||||| ||||||||||||||| | |||||||||
Sbjct 581 GCAACACTTGCAATGCAAGATTTCATGGAGGCAGCAGCAGTTGTGTTCCTATTCACCATA 640
Query 541 GCCGACTGGCTTGAAACAAGAGCTAGCTACAGGGCGAACTCGGTAATGCAGTCTCTGATG 600
|||||||||| ||||||||||||||||||| ||||| ||||||||||||||||||||||
Sbjct 641 TCCGACTGGCTCGAAACAAGAGCTAGCTACAAGGCGACCTCGGTAATGCAGTCTCTGATG 700
Query 601 AGCTTAGCTCCACAGAAGGCAATAATAGCAGAGACTGGTGAAGAAGTTGAAGTAGATGAG 660
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 701 AGCTTAGCTCCACAAAAGGCTATAATAGCAGAGACTGGTGAAGAAGTTGAAGTAGATGAG 760
Query 661 GTTAAGATT-AGCACAGTTGTAGCGGTTAAAGCTGGTGAAACCATACCAATTGATGGAAT 719
|||||| || | ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 761 GTTAAGGTTGAT-ACAGTTGTAGCAGTTAAAGCTGGTGAAACCATACCAATTGATGGAAT 819
Query 720 TGTGGTGGATGGAAACTGTGAAGTAGACGAGAAAACCTTAACCGGCGAAGCATTTCCTGT 779
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 820 TGTGGTGGATGGAAACTGTGAGGTAGACGAGAAAACCTTAACGGGCGAAGCATTTCCTGT 879
Query 780 ACCTAAACAGAGAGATTCTACGGTTTGGGCTGGAACTATCAATCTAAATGGTTACATAAG 839
|||||||||||||||||||| |||||||||||||| || |||||||||||||||||| |
Sbjct 880 GCCTAAACAGAGAGATTCTACCGTTTGGGCTGGAACCATTAATCTAAATGGTTACATATG 939
Query 840 TGTGAAAACAACTTCTTTAGCGGGTGATTGCGTGGTTGCGAAGATGGCTAAGCTAGTAGA 899
|||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 940 TGTGAAAACAACTTCTTTAGCGGGTGATTGTGTGGTTGCGAAAATGGCTAAGCTAGTAGA 999
Query 900 AGAAGCTCAGAGCAGTAAAACCAAATCCCAAAGACTAATAGACAAATGTTCTCAGTACTA 959
||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||
Sbjct 1000 AGAAGCTCAGAGCAGTAAAACCAAATCTCAGAGACTAATAGACAAATGTTCTCAGTACTA 1059
Query 960 TACTCCAGCAATCATCGTAGTATCAGCTTGCGTCGCCATTGTCCCGGTTATTATGAAGGT 1019
|||||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 1060 TACTCCAGCAATCATCTTAGTATCAGCTTGCGTTGCCATTGTCCCGGTTATAATGAAGGT 1119
Query 1020 CCACAACCTTAAACATTGGTTCCACCTGGCATTAGTTGTGTTAGTCAGTGGCTGTCCCTG 1079
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1120 CCACAACCTTAAACATTGGTTCCACCTAGCATTAGTTGTGTTAGTCAGTGGTTGTCCCTG 1179
Query 1080 TGGTCTTATCCTCTCTACACCAGTTGCTACTTTCTGTGCACTTACTAAAGCAGCAACTTC 1139
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1180 TGGTCTTATCCTCTCTACACCAGTTGCTACTTTCTGTGCACTTACTAAAGCGGCAACTTC 1239
Query 1140 CGGGCTTCTGATCAAAAGTGCTGATTATCTTGACACTCTCTCAAAGATCAAAATCGCTGC 1199
||||||||||||||||||||||||||||||||||| |||||||||||||| || | |||
Sbjct 1240 AGGGCTTCTGATCAAAAGTGCTGATTATCTTGACACACTCTCAAAGATCAAGATTGTTGC 1299
Query 1200 TTTCGACAAAACCGGGACTATTACCAGAGGAGAGTTCATTGTCATAGATTTCAAGTCACT 1259
|||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1300 TTTCGATAAAACTGGGACTATTACAAGAGGAGAGTTCATTGTCATAGATTTCAAGTCACT 1359
Query 1260 CTCTAGAGATATAAGCCTACGCAGCTTGCTTTACTGGGTATCAAGTGTTGAAAGCAAATC 1319
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1360 CTCTAGAGATATAAACCTACGCAGCTTGCTTTACTGGGTATCAAGTGTTGAAAGCAAATC 1419
Query 1320 AAGTCATCCAATGGCTGCAACAATCGTGGACTACGCGAAATCCGTTTCTGTTGAGCCTAG 1379
||||||||||||||| |||||||||||||| || || ||||| |||||||||||||||||
Sbjct 1420 AAGTCATCCAATGGCAGCAACAATCGTGGATTATGCAAAATCTGTTTCTGTTGAGCCTAG 1479
Query 1380 GCCTGAAGAGGTTGAAGATTACCAGAATTTTCCAGGTGAAGGAATCTACGGGAAGATTGA 1439
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1480 GCCTGAAGAGGTTGAGGATTACCAGAACTTTCCAGGTGAAGGAATCTACGGGAAGATTGA 1539
Query 1440 TGGGAACGATATCTACATCGGGAACAAAAGGATTGCTTCTCGAGCTGGTTGTTCAACCGT 1499
||| |||||||||| ||| |||||||||| ||| ||||||||||||||||||||||| ||
Sbjct 1540 TGGTAACGATATCTTCATTGGGAACAAAAAGATAGCTTCTCGAGCTGGTTGTTCAACAGT 1599
Query 1500 TCCAGAGACTGAAGTTGATACAAAAGGTGGAAAGACTGTTGGATACGTCTATGTAGGTGA 1559
|||||||| |||||||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct 1600 TCCAGAGATTGAAGTTGATACCAAAGGCGGGAAGACTGTTGGATACGTCTATGTAGGTGA 1659
Query 1560 AAGACTAGCGGGAGTTTTCAATCTTTCTGATGCTTGTAGATCCGGTGTATCTCAAGCAAT 1619
||||||||| ||| |||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1660 AAGACTAGCTGGATTTTTCAATCTTTCTGATGCTTGTAGATCTGGTGTTTCTCAAGCAAT 1719
Query 1620 GACGGAACTGAAATCTCTAGGCATCAAAACCGCAATGCTAACGGGAGATAGTCAAGCCGC 1679
| | ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1720 GGCAGAACTGAAATCTCTAGGAATCAAAACCGCAATGCTAACGGGAGATAATCAAGCCGC 1779
Query 1680 GGCAATGCATGCTCAAGAACAGCTAGGGAATGCTTTGGATGTTGTGCATGGAGAACTTCT 1739
|||||||||||||||||||||||||||||||| ||| |||||||| |||||||| |||||
Sbjct 1780 GGCAATGCATGCTCAAGAACAGCTAGGGAATGTTTTAGATGTTGTACATGGAGATCTTCT 1839
Query 1740 TCCTGAAGATAAATCCAAAATCATACAAGAGTTTAAGAAAGAAGGACCAACCGCAATGGT 1799
||| |||||||| |||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct 1840 TCCAGAAGATAAGTCCAGAATCATACAAGAGTTTAAGAAAGAGGGACCAACCGCAATGGT 1899
Query 1800 AGGGGACGGTGTGAATGATGCACCAGCTTTAGCTACAGCTGATATTGGTATCTCCATGGG 1859
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1900 AGGGGACGGTGTGAATGATGCACCAGCTTTAGCTACAGCTGATATTGGTATCTCCATGGG 1959
Query 1860 GATTTCTGGCTCTGCTCTTGCTACGCAGACTGGTCATATTATTCTAATGTCTAATGACAT 1919
|||||||||||||||||||| || || |||||| |||||||||| ||||||||||| ||
Sbjct 1960 AATTTCTGGCTCTGCTCTTGCAACACAAACTGGTAATATTATTCTGATGTCTAATGATAT 2019
Query 1920 AAGAAGGATACCACAAGCGGTAAAGCTAGCTAGAAGAGCTCGGCGCAAAGTTGTTGAAAA 1979
||||||||||||||||||||| |||||||| |||||||| || |||||||||||||||||
Sbjct 2020 AAGAAGGATACCACAAGCGGTGAAGCTAGCGAGAAGAGCACGACGCAAAGTTGTTGAAAA 2079
Query 1980 CGTGTTTCTTTCAATCGTTTTAAAAGCAGGAATACTAGCTTTGGCGTTTGCTGGTCATCC 2039
||||| ||| || ||| ||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 2080 CGTGTGTCTATCGATCATTTTAAAAGCAGGAATACTCGCTTTGGCATTTGCTGGTCATCC 2139
Query 2040 TTTAATTTGGGCAGCTGTTCTTGTTGATGTAGGGACTTGTCTTCTTGTGATTCTCAATAG 2099
||| |||||||| || |||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 2140 TTTGATTTGGGCTGCGGTTCTTGTTGATGTAGGGACTTGTCTGCTTGTGATTTTCAATAG 2199
Query 2100 TATGTTGCTGCTGCGAGAGAAGAAAAAGATTGGGAACAAAAAGTGTTACAGGGCTTCTAC 2159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2200 TATGTTGCTGCTGCGAGAGAAGAAAAAGATTGGGAACAAAAAGTGTTACAGGGCTTCTAC 2259
Query 2160 ATCTATGTTGAATGGTAGGAAACTCGAAGGCGATGATGATGATGTTGTGGACTTAGAAGC 2219
||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct 2260 ATCTAAGTTGAATGGTAGGAAACTTGAAGGCGATGATGATTATGTTGTGGACTTAGAAGC 2319
Query 2220 AGGCTTGTTAAAAAAGAGCGGGAATGGTCAATGTAACTCAAGCTGTTGTGGAGATAAGAA 2279
||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2320 AGGCTTGTTAACAAAGAGCGGGAATGGTCAATGCAAATCAAGCTGTTGTGGAGATAAGAA 2379
Query 2280 AAATCAAGAGAAGGTTGTGATGATGAAACCAAGTAGTAAAACCAGTTCTGATCATTCTCA 2339
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2380 AAATCAAGAGAATGTTGTGATGATGAAACCAAGTAGTAAAACCAGTTCTGATCATTCTCA 2439
Query 2340 CCCTGGTTGTTGTGGCGATAAGAAGCAAGGCAATGTGAAGCCGCTTGTGAGAGATGGCGG 2399
||||||||||||||||||||||||| ||| || |||||||||||||||| ||||||| |
Sbjct 2440 CCCTGGTTGTTGTGGCGATAAGAAGGAAGAAAAAGTGAAGCCGCTTGTGAAAGATGGCTG 2499
Query 2400 TTGCAGTGAGGAAACTAGGAAAGCAGTGGGAGACATTGTTTCATTGAGCTCATGTAAGAA 2459
|||||||||| ||||||||||| ||| |||||| || |||||||||||||||||||||||
Sbjct 2500 TTGCAGTGAGAAAACTAGGAAATCAGAGGGAGATATGGTTTCATTGAGCTCATGTAAGAA 2559
Query 2460 GTCTAGTCATGTCAAACATGACTTGAAAATGAAAGGTGGTTCAGGTTGTTGTGCTAACAA 2519
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 2560 GTCTAGTCATGTCAAACATGACCTGAAAATGAAAGGTGGTTCAGGTTGTTGTGCTAGCAA 2619
Query 2520 AAGTGAGAA-GGTAGAGGGAGTAGTGGCAAAGAGCTGTTGTGAGAAACCAAAACAGCAAA 2578
|| |||||| || | ||| |||||||||||||||||||||||||||||| ||||||||
Sbjct 2620 AAATGAGAAAGGGA-AGGAAGTAGTGGCAAAGAGCTGTTGTGAGAAACCCAAACAGCAGG 2678
Query 2579 TGGAGAGTGCTGGAGACTGCAAATCTAGCCATTGCGAGGAA-AAGAAGCATGCTGAGGAA 2637
||||||||| |||||||||||| ||| | ||||||||| || |||||||| ||||| ||
Sbjct 2679 TGGAGAGTGTTGGAGACTGCAAGTCTGGTCATTGCGAG-AAGAAGAAGCAAGCTGAAGAC 2737
Query 2638 ATTGTTCTCCCGGTGCAGATGATTGGTCAGGCATTAACTGGTT-TGGAAATAGAGTTGCA 2696
|||||| ||||||||||||| |||||||| |||||||| | | |||| || ||||||||
Sbjct 2738 ATTGTTGTCCCGGTGCAGATTATTGGTCATGCATTAAC-GCATGTGGAGATCGAGTTGCA 2796
Query 2697 GACAAAGGAACCCTGCAAAACAAGCTGTTGTGACAATAAAGAGGAGAAGGTTAAGGAAAT 2756
|||||||||| |||||||||||||||||||||||| |||||| | ||||||||||| |
Sbjct 2797 GACAAAGGAAACCTGCAAAACAAGCTGTTGTGACAGTAAAGA--A-AAGGTTAAGGAGAC 2853
Query 2757 AGGTTTGTTGCTTGCTAGTGAGGACACATCTTACCTGGAGAAGGGAGTGCTGATTAAAGA 2816
||||||| ||||| |||||||| ||||| ||||||||||||| |||||||||||||||||
Sbjct 2854 AGGTTTGCTGCTTTCTAGTGAGAACACACCTTACCTGGAGAAAGGAGTGCTGATTAAAGA 2913
Query 2817 TGAAGGAAACTGCAAGTCTGGCTGCGAGAACAAGGGGACAGTGACACAAAGGTGCCATGA 2876
|||||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||||
Sbjct 2914 TGAAGGAAACTGCAAGTCTGGCAGCGAGAACATGGGGACAGTGAAACAAAGCTGCCATGA 2973
Query 2877 GAAGTGCTGCAGTGATGAAAAACAAACCGGGGAAATAACTCTTGCTTCTGAGGAAGAGAC 2936
|||| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2974 GAAGGGCTGCAGCGATGAAAAACAAACCGGGGAAATAACTCTTGCTTCGGAGGAAGAGAC 3033
Query 2937 AGACGATCAAGATTGCTCCTCGGGATGTTGTGTGAATGAGGGGATAGTGAAACAAAGCTC 2996
||| |||||||||||||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct 3034 AGATGATCAAGATTGCTCCTCGGGATGTTGTGTGAACGAGGGAACAGTGAAACAAAGCTT 3093
Query 2997 CCATGAGAAGAAGCATGCTGTGTTGGTGGAGAAGGAAGGTTTGGACATGGAAACTGGTGT 3056
| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3094 CGATGAGAAGAAGCATTCTGTGTTGGTGGAGAAGGAAGGTTTGGACATGGAAACTGGTTT 3153
Query 3057 ATGTTGTGATGATCTCAAGTTGGTTTGTTGTGGAAACACAGAAGGGGAAGTGGAGGAGCA 3116
|||||||||| | |||| ||||||||||||||||||||||||| |||||| |||||||
Sbjct 3154 CTGTTGTGATG--C-CAAGCTGGTTTGTTGTGGAAACACAGAAGGTGAAGTGAAGGAGCA 3210
Query 3117 ATGT-GATCTGGAGATAAAGAATGAAGGACATTGCAAGTCTGGTTGCTGCAACGATGAAA 3175
|||| | ||||||||||||||| |||| |||||||||||||||||||||| ||| ||||
Sbjct 3211 ATGTCG-TCTGGAGATAAAGAAAGAAGAACATTGCAAGTCTGGTTGCTGCGGCGAGGAAA 3269
Query 3176 -AGCAAACAGCG-GAAATAACTCTGGCTTCTGAGGAAGAGACAGACAGCACGGATTGTTC 3233
| ||||| | | ||||| ||||||| ||| |||||||||||||| |||||| |||||||
Sbjct 3270 TA-CAAACCG-GAGAAATCACTCTGGTTTCAGAGGAAGAGACAGAGAGCACGAATTGTTC 3327
Query 3234 CTCGGGATGTTGTATGGACAAAGAAGAAGTGACACAAATCTG-CGGTGAGAAGCCTGTTA 3292
| |||| |||||| |||||||||||||||||||||||| ||| | ||||||||||| ||
Sbjct 3328 CACGGGTTGTTGTGTGGACAAAGAAGAAGTGACACAAACCTGTCA-TGAGAAGCCTGCTA 3386
Query 3293 GCTTGGTGCTAGCTGACTTGCAAGTGAAGAAGGATGAGCATTGTGAGAGCTCACACGGAG 3352
|||||||| || | | |||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 3387 GCTTGGTGGTATCAGGCTTGGAAGTGAAGAAGGATGAGCATTGTGAGAGCTCACACAGAG 3446
Query 3353 CCGTCAAGGTAGAGACCTGTTGCAAAGTGAAGATTCCAGAGGCTTGTGCACCAAAATGTA 3412
|||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct 3447 CCGTCAAGGTAGAGACCTGTTGCAAAGTGAAGATTCCAGAGGCTTGCGCATCAAAATGTA 3506
Query 3413 AGGAAAAAGAGAAGCGTCACAGTGGTAAAAGCTGTTGCAGGAGTTATGCAAAAGAGTTTT 3472
||| | || |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 3507 GGGACAGAGCGAAGCGTCACAGTGGTAAAAGCTGTTGCAGGAGTTATGCAAAAGAGTTAT 3566
Query 3473 GCAGccaccgccaccatcatcaccaccaccaccatcaccatcaccatGTGAGTGCTTGA 3531
||||||||||||| |||||||||||||||||||| | | ||||||||||||||||||||
Sbjct 3567 GCAGCCACCGCCATCATCATCACCACCACCACCA-C-C-ATCACCATGTGAGTGCTTGA 3622
> AT4G30110.1 | Symbols: HMA2, ATHMA2 | heavy metal atpase 2 |
chr4:14720241-14724584 REVERSE LENGTH=2875
Length=2875
Score = 1681 bits (910), Expect = 0.0
Identities = 1726/2113 (82%), Gaps = 83/2113 (4%)
Strand=Plus/Plus
Query 42 gaagaagttgca-aaagaGTTACTTCGATGTTCTCGGAATCTGTTGTACATCGGAAGTTC 100
||||||| || | |||||||||||||||||||| ||||| || ||||||||||| ||||
Sbjct 16 GAAGAAGATG-ACCAAGAGTTACTTCGATGTTCTTGGAATTTGCTGTACATCGGAGGTTC 74
Query 101 C-TATCATCGAGAATATTCTCAAGT-CACTTGACGGCGTTAAAGAATAT-TCCGTCATCG 157
| | | ||||||||||||||||| | || | ||||| |||||||||| | || || || |
Sbjct 75 CGT-TGATCGAGAATATTCTCAATTCCA-TGGACGGTGTTAAAGAAT-TCTCTGTTATTG 131
Query 158 TTCCCTCGAGAACCGTGATCGTTGTTCACGACAGCCTCCTCAT-CTCTC-C-CTTCCAAA 214
|||| || |||||||| ||||| || ||||||| || ||||| ||||| | |||||||
Sbjct 132 TTCCGTCAAGAACCGTCATCGTCGTCCACGACA--CT-CTCATCCTCTCGCAGTTCCAAA 188
Query 215 TTGCTAAGGCATTGAACCAAGCTA-GGTTAGAAGCAAACGTGAGAGTAAACGGAGAAACA 273
| | ||| ||| |||||||||| | |||||||||||| ||||| |||| |||||||||
Sbjct 189 TCGTTAAAGCACTGAACCAAGC-ACAGTTAGAAGCAAATGTGAGGGTAACCGGAGAAACC 247
Query 274 AACTTCAAGAACAAATGGCCAAG-CCCTTTCGCGGTGGTTTCCGGCATACTTCTCCTCCT 332
|| |||||||| ||||||||||| |||||| |||||||||||||||||||||||||||||
Sbjct 248 AATTTCAAGAATAAATGGCCAAGTCCCTTT-GCGGTGGTTTCCGGCATACTTCTCCTCCT 306
Query 333 CTCCTTCTT-AAAGTTTGTCTACTCGCCTTTACGTTGGATTGCAGTCGCAGCAGTTGCCG 391
||||||||| ||| | | ||||| || || |||||| | || |||||||| |||| ||
Sbjct 307 CTCCTTCTTCAAA-TACCTTTACTCTCCCTTCCGTTGGCTCGCTGTCGCAGCCGTTGTCG 365
Query 392 CCGGTATATATCCGATACTT-GCCAAAGCCT-TTGCTTC-CATTAG-AAGGCTTAGGCTC 447
| || || ||||||||| || ||||||| || | || || | || | |||| |||| ||
Sbjct 366 CTGGCATTTATCCGATA-TTAGCCAAAG-CTGTAGCATCTC-TT-GCAAGGTTTAGAATC 421
Query 448 GACATCAACA-TATTGGTCATTATAACCGTGATAGCAACACTT-GCAATGCAAGATTTCA 505
|||||||||| | || || || |||||||| ||||||| || || |||||||||| ||
Sbjct 422 GACATCAACATTCTT-GTTGTTGTAACCGTGGGAGCAACAATTGGC-ATGCAAGATTACA 479
Query 506 TGGAGGCTGCAGCAGTTGTGTTCTTGTTCACCATAGCCGACTGGCTTGAAACAAGAGCTA 565
|| ||||||| |||||| ||||||||||| || || || ||||| || | |||||||
Sbjct 480 CAGAAGCTGCAGTAGTTGTCTTCTTGTTCACAATCGCTGAATGGCTCCAATCTAGAGCTA 539
Query 566 GCTACAGGGCGAACT-CGGTAATGCAGTCTCTGATGAGCTTAGCTCCACAGAAGGCAATA 624
|||| | ||| || | | || ||||||||| ||||||| ||||||||||| ||||| |
Sbjct 540 GCTATAAGGC-AAGTGCAGTGATGCAGTCTTTGATGAGTTTAGCTCCACAAAAGGCCGTG 598
Query 625 ATAGCAGAGACTGGTGAAGAAGTTGAAGTAGATGAGGTTAAGATTAGCACAGTTGTAGCG 684
|| ||||||||||| |||||||||||||| ||||| | |||| || ||||||| ||||
Sbjct 599 ATTGCAGAGACTGGAGAAGAAGTTGAAGTGGATGAACTCAAGACTAACACAGTTATAGCT 658
Query 685 GTTAAAGCTGGTGAAACCATACCAATTGATGGAATTGTGGTGGATGGAAACTGTGAAGTA 744
|| |||||||||||||||||||||||||||||| |||| || |||||||||||||||||
Sbjct 659 GTCAAAGCTGGTGAAACCATACCAATTGATGGAGTTGTTGTTGATGGAAACTGTGAAGTT 718
Query 745 GACGAGAAAACCTTAACCGGCGAAGCATTTCCTGTACCTAAACAGAGAGATTCTACGGTT 804
|| |||||||| || ||||| |||||||| || || ||||||| || |||||| ||||||
Sbjct 719 GATGAGAAAACTTTGACCGGTGAAGCATTCCCCGTGCCTAAACTGAAAGATTCGACGGTT 778
Query 805 TGGGCTGGAACTATCAATCTAAATGGTTACATAAGTGTGAAAACAACTTCTTTAGC-GGG 863
||||||||||| |||||||||||||||||||||| |||||| || ||| || |||| | |
Sbjct 779 TGGGCTGGAACCATCAATCTAAATGGTTACATAACTGTGAACACCACTGCTCTAGCTGAG 838
Query 864 TGATTGCGTGGTTGCGAAGATGGCTAAGCTAGTAGAAGAAGCTCAGAGCAGTAAAACC-A 922
||||||||||||||||||||||| || || |||||||||||||||| ||| |||||| |
Sbjct 839 -GATTGCGTGGTTGCGAAGATGGCAAAACTTGTAGAAGAAGCTCAGAACAGCAAAACCGA 897
Query 923 AATCCCAAAGACTAATAGACAAATGTTCTC-AGTACTATACTCCAGCAATCATCGTAG-T 980
|| | || ||| | ||||| |||||||| | |||||||||||||||| |||||| | | |
Sbjct 898 AA-CTCAGAGATTTATAGATAAATGTTC-CAAGTACTATACTCCAGCGATCATCCT-GAT 954
Query 981 ATC-AGCTTGCGTCGCCATTGTCCCGGTTAT-TA-TGAAGGTCCACAACCTTAAACATT- 1036
||| | | || | | | |||| || | | ||||||| |||||||| |||||||
Sbjct 955 ATCAATC-TGTTTTGTGGCTATCCC-ATT-TGCATTGAAGGTTCACAACCTGAAACATTG 1011
Query 1037 GGTTCCACCTGGCATTAGTTGTGTTAGTCAGTGGC-TGTCCCTGTGGTCTTATCCTCTCT 1095
|||| ||| | ||| ||||||||||||| ||| || ||||| ||||| |||||||||||
Sbjct 1012 GGTT-CACTTAGCACTAGTTGTGTTAGTAAGT-GCTTGTCCTTGTGGACTTATCCTCTCC 1069
Query 1096 ACACCAGTTGCTACTTTCTGTGCACTTACTAAA-GCAGCAACTTCCGGGCTTCTGATCAA 1154
|||||||| || |||||||||||||| || ||| ||||| || || || ||| |||||||
Sbjct 1070 ACACCAGTAGCCACTTTCTGTGCACTCAC-AAAGGCAGCCACATCAGGACTTTTGATCAA 1128
Query 1155 AAGTGCTGATTATCTTGACA-CTCTCTCAAAGATCAAAATCGCTGCTTTCGACAAAACCG 1213
| | |||||||| ||||| | || | | |||||||| || | |||||| || |||||||
Sbjct 1129 AGGAGCTGATTACCTTGAAACCT-TAGCCAAGATCAAGATTGTTGCTTTTGATAAAACCG 1187
Query 1214 GGACTATTACCAGAGGAGAGTTCATTGTCATAGATTTCAAGTCACTCTCTAG-AGATATA 1272
||||||| || ||||| |||||||| ||||| |||||| ||||||| ||| | |||||||
Sbjct 1188 GGACTATCACTAGAGGTGAGTTCATCGTCATGGATTTCCAGTCACTTTCT-GAAGATATA 1246
Query 1273 AGCCTACGCAG-CT-TGCTTTACTGGGTATCAAGTGTTGAAAGCAAATCAAGTCATCCAA 1330
||||| |||| | ||||||||||||||||||| ||| ||||| ||||| |||||||
Sbjct 1247 AGCCT--GCAGAGTCTGCTTTACTGGGTATCAAGCACTGAGAGCAAGTCAAGCCATCCAA 1304
Query 1331 TGGCTGCAACAATCGTGGACTACGCGAA-ATCCGTTTCTGTTGAGCCTAGGCCTGAAGAG 1389
||||||| || | |||||||| || || ||| || |||||||| |||| |||||||| |
Sbjct 1305 TGGCTGCTGCAGTTGTGGACTATGC-AAGATCTGTCTCTGTTGAACCTAAGCCTGAAGCG 1363
Query 1390 GTTGAAGATTACCAGAATTTTCCAGGTGAAGGAATCTACGGGAAGATTGATGGGAACGAT 1449
|| ||||| |||||||| |||||||| ||||| || || |||||||||||||| || ||
Sbjct 1364 GTCGAAGACTACCAGAACTTTCCAGGAGAAGGGATTTATGGGAAGATTGATGGTAAAGA- 1422
Query 1450 A-TCTACATCGGGAACAAAAGGATTGCTTCTCGAGCTGGTTGTTCAACCGTTCCAGAGAC 1508
| |||| ||||| |||||||||||||||||| ||||||| |||| | | |||||||| |
Sbjct 1423 AGTCTATATCGGTAACAAAAGGATTGCTTCTAGAGCTGGGTGTTTATCAGTTCCAGATAT 1482
Query 1509 TGAAGTTGATACAAAAGGTGGAAAGACTGTTGGATACGTCTATGTAGGTGAAAGACTAGC 1568
||| |||||||| ||||| |||||||| ||||||| || ||||| || |||| ||||||
Sbjct 1483 TGATGTTGATACTAAAGGAGGAAAGACAATTGGATATGTATATGTTGGAGAAACACTAGC 1542
Query 1569 GGGAGTTTTCAATCTTTCTGATGCTTGTAGATCCGGTGTATCTCAAGCAATGACGGAACT 1628
|| ||||||||||| || |||||||||||||| |||||| ||||||| |||| |||||
Sbjct 1543 TGGTGTTTTCAATCTCTCAGATGCTTGTAGATCTGGTGTAGCTCAAGCCATGAAAGAACT 1602
Query 1629 GAAATC-TCTAGGCATCAAAACCGCAATGCTAACGGGAGATAGTCAAGCCGCGGCAATGC 1687
|||||| | | || || || | |||||||| || ||||||| ||| ||||| |||||||
Sbjct 1603 GAAATCGT-TGGGAATTAAGATTGCAATGCTTACCGGAGATAATCATGCCGCTGCAATGC 1661
Query 1688 ATGCTCAAGAACAGCTAGGGAATGCTTTGGATGTTG-T-GCATGGAGAACTTCTTCCTGA 1745
||||||||||||||||||| |||||| ||||| ||| | | | | ||| |||||||| ||
Sbjct 1662 ATGCTCAAGAACAGCTAGGAAATGCTATGGATATTGTTAG-A-GCAGAGCTTCTTCCAGA 1719
Query 1746 AGATAAATCCAAAATCATACAAGAGTT-TA-AGA-AAGAAGGACCAACCGCAATGGTAGG 1802
||||||||| |||||||| || |||| | ||| ||||||| ||||| || ||||||||
Sbjct 1720 AGATAAATCTGAAATCATAAAACAGTTAAAGAGAGAAGAAGGGCCAACGGCTATGGTAGG 1779
Query 1803 GGAC-GGTGTGAATGATGCACCAGCTTTAGCTACAGCTGATATTGGTATCTCCATGGG-G 1860
|||| ||| |||||||||||||||||||||||||||| |||||||||||||| ||||| |
Sbjct 1780 GGACGGGT-TGAATGATGCACCAGCTTTAGCTACAGCGGATATTGGTATCTCAATGGGTG 1838
Query 1861 ATTTCTGGCTCTGCTCTTGCTAC-GCAGACTGGTCATATTATTCTAATGTCTAATGACAT 1919
|||| |||||||| ||||| || | |||||||| |||| ||||| ||||| ||||| ||
Sbjct 1839 -TTTCCGGCTCTGCACTTGCAACAG-AGACTGGTAATATAATTCTGATGTCCAATGATAT 1896
Query 1920 AAGAAGGATACCACAAGCGGTAAAGCTAGCTAGAAGAGCTCGGCGCAAAGTTGTTGAAAA 1979
||||| ||||| || ||| ||||||| || | |||||| | ||||| || || ||
Sbjct 1897 CAGAAGAATACCGCAGGCGATAAAGCTTGCAAAAAGAGCGAAAAGGAAAGTGGTGGAGAA 1956
Query 1980 CGTGTTTCTT-TCAATCGTTTTAAAAGCAGGAATACTAGCTTTGGCGTTTGCTGGTCATC 2038
||| | | | |||||| | | |||| || || || || ||||| |||||||||||||
Sbjct 1957 TGTGGT-CATATCAATCACTATGAAAGGAGCTATTCTTGCATTGGCATTTGCTGGTCATC 2015
Query 2039 CTTTAATTTGGGCAGCTGTTCTTGTTGATGTAGGGACTTGTCTTCTTGTGATTCTCAATA 2098
| | ||||||||||||||||||| |||||||| |||||||| |||||||| || ||||
Sbjct 2016 CGCTGATTTGGGCAGCTGTTCTTGCAGATGTAGGAACTTGTCTGCTTGTGATCCTTAATA 2075
Query 2099 GTATGTTGCTGCT 2111
| |||||| ||||
Sbjct 2076 GCATGTTGTTGCT 2088
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 181855168375
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5