BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481030 Length=974 Score E Sequences producing significant alignments: (Bits) Value AT2G21620.2 | Symbols: RD2 | Adenine nucleotide alpha hydrolase... 1338 0.0 > AT2G21620.2 | Symbols: RD2 | Adenine nucleotide alpha hydrolases-like superfamily protein | chr2:9248573-9250256 FORWARD LENGTH=1028 Length=1028 Score = 1338 bits (724), Expect = 0.0 Identities = 927/1017 (91%), Gaps = 45/1017 (4%) Strand=Plus/Plus Query 1 AAATCAAATTCTCTACACGCAACTTTCTTTCAAAT------CC-A--ATCTCGATTCATT 51 ||||||||||||||||||||||||||||||||||| || | |||||||||||| Sbjct 13 AAATCAAATTCTCTACACGCAACTTTCTTTCAAATACAAAACCAATCATCTCGATTCATC 72 Query 52 GAACCCGTGAAGACCCAGAAACCGAAATCGAAGACCCAACGAAACCCATTAA-TCAAAAT 110 |||||| ||||||||||||||| |||||||||||||||| ||||||| || || |||| Sbjct 73 CAACCCGCGAAGACCCAGAAACCAAAATCGAAGACCCAACAAAACCCA-CAAGTCGAAAT 131 Query 111 CTCGAAATCCGTTGAAAGTTTGTTCC--TTTTTG---G-TCGGAGATGGAGGCTTTACCG 164 ||||||||||||||| |||||||||| |||||| | ||||||||||||||||| ||| Sbjct 132 CTCGAAATCCGTTGAGAGTTTGTTCCTTTTTTTGTTTGCTCGGAGATGGAGGCTTTGCCG 191 Query 165 GAGGATGAAGAGTACAGTTTCAGGGAAGTGGTGTTGCCGTCGTTGATTCCGGTAGTACAG 224 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| | | Sbjct 192 GAGGATGAAGAGTACAGTTTCAGGGAAGTAGTGTTGCCGTCTTTGATTCCGGTAGTGCCG 251 Query 225 GAGCCGGAACTagagagagagagcggagagagaagaagaggaagagaTGTAATCGTAGCC 284 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct 252 GAGCCGGAACTTGAGAGAGAGAGCGGAGAGAGGAGAAGAGGAAGAGATGTTATCGTAGCC 311 Query 285 GTTGATCATGGTCCCAATAGCAAACACGCCTTTGATTGGGCTCTCGTTCACTTCTGTCGT 344 ||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| Sbjct 312 GTTGATCATGGTCCCAATAGCAAACACGCTTTTGATTGGGCTCTTGTTCATTTCTGTCGT 371 Query 345 CTCGCCGATACTCTCCACCTAGTCCACGCCGTCTCAAGTTCGTTCTCTCTTCAATGTGTT 404 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 372 CTCGCCGATACTCTCCATCTTGTCCACGCCGTCTCAAGTTCGTTCTCTCTTCAATGTGTT 431 Query 405 AAGAACGATGTTGTGTATGAGACGAGCCAAGCTCTCATGGAGAAACTAGCTATTGAGGCG 464 |||||||||||||||||||||||||||||||| |||||||||||||| ||| |||||||| Sbjct 432 AAGAACGATGTTGTGTATGAGACGAGCCAAGCCCTCATGGAGAAACTTGCTGTTGAGGCG 491 Query 465 TATCAAGTTGCCATGGTAAAGAGTGTGGCTCGTGTTGTTGAAGGCGATGCTGGTAAAGTA 524 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 492 TATCAAGTTGCCATGGTAAAGAGTGTGGCTCGTGTTGTTGAAGGCGATGCTGGTAAAGTA 551 Query 525 ATCTGCAAGGAAGCAGAGAAAGTGAAGCCTGCTGCTGTAATTTTGGGCACACGAGGCAGG 584 |||||||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| Sbjct 552 ATCTGCAAGGAAGCAGAGAAAGTGAAGCCTGCTGCTGTGATTGTAGGCACACGAGGCAGG 611 Query 585 AGCTTAGTAAGAAGCGTGCTACAAGGGAGCGTAAGCGAGTATTGTTTCCACAATTGCAAA 644 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 612 AGCTTAGTAAGAAGCGTGCTACAGGGGAGCGTAAGCGAGTATTGTTTCCACAATTGCAAA 671 Query 645 TCCGCTCCCGTCATAATCGTTCCTGGGAAAGAAGCTGGAGACGAGTCGATTGTGGACTGG 704 || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||| Sbjct 672 TCTGCTCCTGTCATAATCGTTCCTGGAAAAGAAGCTGGAGACGAGTCGATCGTGGACTGG 731 Query 705 ACACGTTCAGAAGATCCAAAACCCTGAAGAAAA-GTTCAACTATT-T--CCACGAAGACT 760 ||||| ||||||||||| ||||||||||||||| |||||| | || | ||||||||||| Sbjct 732 ACACGCTCAGAAGATCCTAAACCCTGAAGAAAAAGTTCAAGTGTTGTTTCCACGAAGACT 791 Query 761 GTTTTGTTTTTCATCTTTCTTTCGCTATTGTTGCAGTCTTTGTTTCTGTATG-C--T--- 814 |||||||||||||||||||| |||||| |||||||||||||||||||||||| | | Sbjct 792 GTTTTGTTTTTCATCTTTCTGTCGCTACTGTTGCAGTCTTTGTTTCTGTATGTCCCTAAA 851 Query 815 --TCTT------CTTCGTCT-C-T-T-T--GTGTGTGTATGTGTTTTGATTTGGGTTTT- 859 |||| |||| ||| | | | | ||||||||||||||||||||||||||||| Sbjct 852 AATCTTAGATTGCTTCTTCTTCGTCTCTCTGTGTGTGTATGTGTTTTGATTTGGGTTTTT 911 Query 860 GTAGTTTCAAA-TTTCTGTATAAAACCTTTGCTCAGGAATGAAAT-TATTGTATGCAGTG 917 ||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||| || Sbjct 912 GTAGTTTCAAAATTTCTGTATAAAACCTTTGCTCAGGAATGAA-TGTATTGTATGCAATG 970 Query 918 GTGTCATGTGTTTCAGACTTTTCACTAAACAAATCTATAGCAGAAACTATTTCTTTT 974 |||| ||||||||||||||||||| ||||||| |||||||||| |||||||||||| Sbjct 971 GTGTGATGTGTTTCAGACTTTTCAGTAAACAAGCCTATAGCAGACACTATTTCTTTT 1027 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 47672205503 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5