BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481085 Length=1244 Score E Sequences producing significant alignments: (Bits) Value AT2G22190.1 | Symbols: TPPE | Haloacid dehalogenase-like hydrol... 1906 0.0 AT5G10100.1 | Symbols: TPPI | Haloacid dehalogenase-like hydrol... 442 4e-123 > AT2G22190.1 | Symbols: TPPE | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:9433765-9436544 REVERSE LENGTH=1259 Length=1259 Score = 1906 bits (1032), Expect = 0.0 Identities = 1190/1262 (94%), Gaps = 27/1262 (2%) Strand=Plus/Plus Query 1 ACATTCAGTCTCATTTCCATCAAAATTATAACTTCATTTCA-AGTTTTGATTAATATCCT 59 ||||||| ||||||||||||||||||||||||||||||| | | |||||||||||||||| Sbjct 1 ACATTCACTCTCATTTCCATCAAAATTATAACTTCATTTTACA-TTTTGATTAATATCCT 59 Query 60 AAAATGGTTAGATTCGTCGAAGAGAATACTACTAAAATGTTGGAGACAAAGGTCATCTCA 119 ||||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||| Sbjct 60 AAAATGGTTAGATTCATCGAAGAAAATATTACTAAAATGTTGGAGACAAAGGCCATCTCA 119 Query 120 AACTCGGAGGTTTTATATGTCGGAAGAGACGACGGAGACACGTCACCATCGACGAAAGTT 179 |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| Sbjct 120 AACTCGGAGGTTTTATATGTCGGAGGAGACGACGGAGACACGTCACCAACGACGAAAGTT 179 Query 180 CTTCATGATTTTCAGATCAACGGCGGAGGAGGAGGAGGACTGATAAGATCATGGGTTGAT 239 |||||||||||||||||||| | | | |||||||||||||||||||||||||||||| Sbjct 180 CTTCATGATTTTCAGATCAA---C--A-GCGGAGGAGGACTGATAAGATCATGGGTTGAT 233 Query 240 TCCATGAGAGCTTGTTCTCCTACTCGTCCTAAATCCTTCAATAGCCAATCTTGTTGGATT 299 || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 234 TCTATGAGAGCTTGTTCTCCTACTCGCCCTAAATCCTTCAATAGCCAATCTTGTTGGATT 293 Query 300 AAGGAACATCCATCAGCTTTGAACATGTTCGAAGAAATACTTCATAAATCTAAAGGAAAA 359 |||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| Sbjct 294 AAGGAACATCCATCTGCTTTGAACATGTTCGAAGAAATACTTCATAAATCTGAAGGAAAA 353 Query 360 CAAATAGTTATGTTTCTTGATTATGATGGTACTCTCTCTCCCATTGTTGATGATCCTGAT 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 354 CAAATAGTTATGTTTCTTGATTATGATGGTACTCTCTCTCCCATTGTTGATGATCCTGAT 413 Query 420 CGAGCTTTCATGTCCAAGAAGATGCGAAATACAGTAAGGAAACTTGCAAAGTGTTTTCCA 479 |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| Sbjct 414 CGAGCTTTCATGTCCAAGAAGATGCGAAATACTGTGAGGAAACTTGCAAAGTGTTTTCCA 473 Query 480 ACAGCCATAGTTAGTGGGAGATGCAGAGAGAAGGTTTCTAGTTTTGTGAAATTAACTGAG 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 474 ACAGCCATAGTTAGTGGGAGATGCAGAGAGAAGGTTTCTAGTTTTGTGAAATTAACTGAG 533 Query 540 CTATACTACGCTGGAAGTCATGGCATGGACATCAAAGGACCAGAGCAAGGACCTAAATAC 599 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 534 TTATACTACGCTGGAAGTCATGGCATGGACATCAAAGGACCAGAGCAAGGATCTAAATAC 593 Query 600 AAGAAAGAAAATCAGTCTCTTCTTTGTCAACCCGCGACTGAGTTCCTCCCAGTGATCAAC 659 ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| ||| Sbjct 594 AAGAAAGAAAATCAGTCTCTTCTTTGTCAACCCGCAACTGAATTCCTCCCGGTGATAAAC 653 Query 660 GAGGTTTATAAAAAACTACTCGAGAAAAC-CAAATCGATTCCAGGAGCCAAAGTTGAGAA 718 |||||||||||||||||| ||||||| || ||| |||||||||||||| ||||||||||| Sbjct 654 GAGGTTTATAAAAAACTAGTCGAGAACACTCAA-TCGATTCCAGGAGCGAAAGTTGAGAA 712 Query 719 CAACAAATTTTGTGCGTCTGTTCACTTTCGATGCGTAGAAGAAAATAAATGGAGTGACTT 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 713 CAACAAATTTTGTGCGTCTGTTCACTTTCGATGCGTAGAAGAAAATAAATGGAGTGACTT 772 Query 779 GACCAATCAAGTTCGATCAGTCTTGAAGAACTACCCCAAGCTCATGCTTACCCAAGGAAG 838 | || ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 773 GGCCCATCAAGTTCGATCAGTCTTGAAGAATTACCCCAAGCTCATGCTTACCCAAGGAAG 832 Query 839 AAAAGTGTTGGAGATTCGTCCAATCATTAAGTGGGATAAAGGCAAAGCACTCGAGTTTTT 898 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 833 AAAAGTATTGGAGATTCGTCCAATCATTAAGTGGGATAAAGGCAAAGCACTCGAGTTTTT 892 Query 899 GTTAGAATCACTCGGATATAATAATTGTACTGATGTTTTTCCTATATATATTGGAGATGA 958 |||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||| Sbjct 893 GTTAGAATCACTAGGATATGATAATTGTACCGATGTTTTTCCTATATATATTGGAGATGA 952 Query 959 TCGTACCGACGAAGATGCCTTTAAGATATTGAGAGATAAAAAACAAGGTCTTGGAATTCT 1018 ||||||||||||||| |||||||||||| ||||||| ||||||||||||||||||||||| Sbjct 953 TCGTACCGACGAAGACGCCTTTAAGATACTGAGAGACAAAAAACAAGGTCTTGGAATTCT 1012 Query 1019 TGTGTCCAAATACGCAAAGGAGACTAATGCTTCTTATTCTTTGCAAGAGCCAGATGAGGT 1078 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 TGTGTCCAAATACGCAAAGGAGACTAATGCTTCTTATTCTTTGCAAGAGCCAGATGAGGT 1072 Query 1079 TATGGATTTTTTAGAACGTTTGGTGGACTGGAAACAATTAAGATGTGGGGCATGAAGAGT 1138 ||||| ||||||||||||||||||||| |||||||| | ||| ||||||||||||||||| Sbjct 1073 TATGGTTTTTTTAGAACGTTTGGTGGAATGGAAACAGTCAAGGTGTGGGGCATGAAGAGT 1132 Query 1139 TTACAAGTACAGGAGAA--T----Ctttttattttt-cttttt--tattt-GT-T----A 1183 ||||||||||||||||| | |||||| ||||| |||||| ||| | || | | Sbjct 1133 TTACAAGTACAGGAGAAACTTGTTCTTTTTCTTTTTTCTTTTTACTATGTAGTATTGGTA 1192 Query 1184 A-GATTCTAACGTATAAGAGAACGAGAATTATTTTGTTAAATATAACAAAAAGACAAATA 1242 | ||||||||||||||||||||||||||| | ||| |||| |||||||| |||||||||| Sbjct 1193 AAGATTCTAACGTATAAGAGAACGAGAATAAGTTTATTAA-TATAACAAGAAGACAAATA 1251 Query 1243 TT 1244 || Sbjct 1252 TT 1253 > AT5G10100.1 | Symbols: TPPI | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr5:3157980-3160445 FORWARD LENGTH=1280 Length=1280 Score = 442 bits (239), Expect = 4e-123 Identities = 611/786 (78%), Gaps = 43/786 (5%) Strand=Plus/Plus Query 353 AGGAAAACAAATAGTTATGTTTCTTGATTATGATGGTACTCTCTCTCCCATTGTTGATGA 412 ||| |||||||| || ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 327 AGGGAAACAAATCGTAATGTTTCTTGATTATGACGGTACTCTCTCTCCCATTGTTGATGA 386 Query 413 TCCTGATCGA-GCTTTCATGTCCAAG-AAGATGCGAA-ATACAGT-AAGGAAACTTGCAA 468 ||| || | | ||||||||||| ||| |||||| ||| | ||||| || ||||| || | Sbjct 387 TCCAGA-CAAAGCTTTCATGTC-AAGCAAGATGAGAAGA-ACAGTGAAA-AAACTGGCTA 442 Query 469 AGTGTTTTCCAACAGCCATAGTTAGTGGGAGATGCAGAGAGAAGGTTTCTAGTTTTGTGA 528 ||||||| || || || ||||||| ||| ||||||| ||| ||||| | || ||||||| Sbjct 443 AGTGTTTCCCCACTGCTATAGTTACTGGTAGATGCATAGACAAGGTGTATAACTTTGTGA 502 Query 529 AA-TTAACTGAGCTATACTACGCTGGAAGTCATGGCATGGACATCAAAGGACCAG-AGCA 586 | || ||||||| || || |||||||| |||||||||||||| ||||| |||| | | Sbjct 503 AGCTTG-CTGAGCTGTATTATGCTGGAAGCCATGGCATGGACATTAAAGGTCCAGCAA-A 560 Query 587 AGGAC--CTA-A-ATACAAGAAAGA-AAATCAGTCTCTTCTTTGTCAACCCGCGACTGAG 641 ||| | || | | |||||| | ||| ||||||||||| | ||||| || | ||| Sbjct 561 AGG-CTTCTCCAGACACAAGAGGGTTAAA-CAGTCTCTTCTGTACCAACCAGCTAATGAC 618 Query 642 T-TCCTCCCAGTGATCAACGAGGTTTATAAAAAACTACTCG-AGAAAACCAAATCGATTC 699 | || ||||| ||||| | || ||||||| | |||| || | | ||||| ||||||| || Sbjct 619 TATCTTCCCA-TGATCGATGAAGTTTATAGACAACT-CTTGGAAAAAACAAAATCGACTC 676 Query 700 CAGGAGCCAAAGTTGAGAACAACAAATTTTGTGCGTCTGTTCACTTTCGATGCGTAGAAG 759 ||||||||||||| || ||| |||| |||||||| ||||| |||||||| ||||| || | Sbjct 677 CAGGAGCCAAAGTAGAAAACCACAAGTTTTGTGCTTCTGTGCACTTTCGCTGCGTCGATG 736 Query 760 AAAATAAATGGAGTGA-CTTGACCAATCAAGTTCGATCAGTCTTGAAGAACTACCCCAAG 818 | || |||||||| || || | | | || ||||| || || || ||||| | ||| | | Sbjct 737 AGAAGAAATGGAGCGAACTGGTTCTA-CAGGTTCGGTCGGTATTAAAGAAATTCCCTACG 795 Query 819 CT-CATGCTTACCCAAGGAAGAAAAGTGTTGGAGATTCGTCCAATCATT-AAGTGGGATA 876 || || || |||||||| | || || || || || |||||||| ||| || ||||||| Sbjct 796 CTGCAA-CTGACCCAAGGTCGGAAGGTTTTCGAAATCCGTCCAATGATTGAA-TGGGATA 853 Query 877 AAGGCAAAG-CACTCGAGTTTTTGTTAGAATCACTCGGATATAATAATTGTA-CTGATGT 934 |||| |||| | || ||||| |||||||||||||| |||| | || || | |||| Sbjct 854 AAGG-AAAGGCTCTTGAGTTCTTGTTAGAATCACTTGGATTTGGGAACACTAACA-ATGT 911 Query 935 TTTTCCTATATATATTGGAGATGATCGTACCGACGAAGATGCCTTTAAGATATTGA-GAG 993 ||| || | |||||||| || ||||| || ||||||||||| |||||||| | | ||| Sbjct 912 TTTCCCGGTTTATATTGGTGACGATCGAACTGACGAAGATGCATTTAAGATGCT-ACGAG 970 Query 994 ATAAAAAAC-AAGGTCTT-GGAATTCTTGTGTCCAAATA-CGCAAAGGAGACTAATGCTT 1050 | | | | |||| ||| || |||||||| ||||| | | ||| ||| ||| |||||| Sbjct 971 ACAGAGG-CGAAGG-CTTTGGCATTCTTGTCTCCAAGTTTCCCAA-GGATACTGATGCTT 1027 Query 1051 CTTATTCTTTGCAAGAGCCAGATGAGGTTATGGATTTTTTA-GAACGTTTGGTGGACTGG 1109 | |||||||||||||| ||| ||||| |||||||| ||| || || |||||||| ||| Sbjct 1028 CGTATTCTTTGCAAGATCCATCCGAGGTGATGGATTTCTTACGA-CGATTGGTGGAATGG 1086 Query 1110 AAACAA 1115 |||||| Sbjct 1087 AAACAA 1092 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 61144263810 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5