BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg481183

Length=818
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G23096.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-depen...  1173    0.0  


> AT2G23096.1 | Symbols:  | 2-oxoglutarate (2OG) and Fe(II)-dependent 
oxygenase superfamily protein | chr2:9834766-9836235 
REVERSE LENGTH=825
Length=825

 Score = 1173 bits (635),  Expect = 0.0
 Identities = 770/832 (93%), Gaps = 22/832 (3%)
 Strand=Plus/Plus

Query  1    ATGAGATCATATGGCAAAGAGAAGAAGTTAGGGTTTCCTTACgttttc-ttggcgtgttg  59
            ||||||||||||||||||||||||||||||| |||||| ||||||||| || ||||||||
Sbjct  1    ATGAGATCATATGGCAAAGAGAAGAAGTTAGTGTTTCCGTACGTTTTCATT-GCGTGTTG  59

Query  60   cttcttcttggccatcttcggtttctgtttcttcaatcttctt-tctCAGATAATAAGTT  118
            |||||||||||||||||||||||||||||||||||||||| || ||||||  ||| ||||
Sbjct  60   CTTCTTCTTGGCCATCTTCGGTTTCTGTTTCTTCAATCTT-TTCTCTCAGGGAATTAGTT  118

Query  119  TCAGTGAGATTTCGAC-GC--GAAGATCTGTAAACGAAGAAACTGAATCTTTGGATCATG  175
            ||||||||||| ||||  |  |||||||||| ||||| |||||||| |||||||||||||
Sbjct  119  TCAGTGAGATTCCGACAACAAGAAGATCTGTTAACGATGAAACTGATTCTTTGGATCATG  178

Query  176  G---TTCTGTCTCTAACATTCCTTTTCATGGTTTAAGCTGGAATCCTCGAGTTTTTTACT  232
            |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  179  GTTCTTCTGTCTCTAACATTCCTTTTCATGGTTTAAGCTGGAATCCTCGAGTTTTTTACT  238

Query  233  TGCCGAATTTCGCAACTAAACAACAATGTGAAGCCGTTATCGATATGGCAAAGCCTAAGC  292
            |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct  239  TGCCGAATTTCGCAACGAAACAACAATGTGAAGCCGTTATCGATATGGCAAAGCCTAAGC  298

Query  293  TTAAGCCTTCT-CTGCTTGCTTTAAGGAAAGGCGAAACCGCAGAAACCACTCAAAACGTT  351
            ||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||  |
Sbjct  299  TTAAGCCTTCTAC-GCTTGCTTTAAGGAAAGGTGAAACCGCAGAAACCACTCAAAAC--T  355

Query  352  AGAAC-AAG-GTT-A-AAGAAAACTGATGAAGATGAATCCGGGCTTTTAACTGCCATCGA  407
              | |  ||  || |  || | || |||||||| ||||||||| ||||| ||||||||||
Sbjct  356  --ACCGGAGTCTTCATCAGCACACCGATGAAGACGAATCCGGGGTTTTAGCTGCCATCGA  413

Query  408  AGAGAAAATAGCTTTAGCCACGAGAATCCCTATAGATTATTACGAATCATTCAACATCTT  467
            ||||||||||||||||||||| ||| |||| | |||||||||||||||||||||||||||
Sbjct  414  AGAGAAAATAGCTTTAGCCACAAGATTCCCCAAAGATTATTACGAATCATTCAACATCTT  473

Query  468  GAGGTATCAGCTTGGCCAGAAATATGATTCACATCACGATGCTTTCCATCCAGCAGTGTA  527
            ||||||||||||||||||||| |||||||||||| | |||||||||||| |||||| |||
Sbjct  474  GAGGTATCAGCTTGGCCAGAAGTATGATTCACATTATGATGCTTTCCATTCAGCAGAGTA  533

Query  528  TGGTCCCC-AGATAAGCCAAAGGGTCGTGACTTTCCTATTGTTCTTATCGAGTGTCGAAG  586
            |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  534  TGGTCCCCTA-ATAAGCCAAAGGGTCGTGACTTTCCTATTGTTCTTATCGAGTGTCGAAG  592

Query  587  AAGGTGGAGAGACGATGTTCCCATTCGAGAATGGGAGAAACATGAATGGAAGTTATGATT  646
            |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct  593  AAGGTGGAGAGACGATGTTCCCATTCGAGAATGGGAGAAATATGAATGGAAGATATGATT  652

Query  647  ATGAGAAGTGTATTGGTCTGAGAGTAAAACCGCGACAAGGAGACGCCATTTTCTTCTACA  706
            ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||
Sbjct  653  ATGAGAAGTGTGTTGGTCTGAAAGTAAAGCCGCGACAAGGAGACGCCATTTTCTTCTACA  712

Query  707  ATTTGCTCCCAAATGGAACGATCGATCAGACATCTCTCCATGGAAGCTGTCCTGTTATCA  766
            ||||| | |||||||||||||||||||| |||||||| ||||||||||||||||||||||
Sbjct  713  ATTTGTTTCCAAATGGAACGATCGATCAAACATCTCTACATGGAAGCTGTCCTGTTATCA  772

Query  767  AGGGTGAGAAATGGGTTGCCACCAAATGGATAAGAGACCAAACATATGATTG  818
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  773  AGGGTGAGAAATGGGTTGCCACCAAATGGATAAGAGACCAAACATATGATTG  824



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 39835678571


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5