BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481185 Length=417 Score E Sequences producing significant alignments: (Bits) Value AT2G23120.1 | Symbols: | Late embryogenesis abundant protein, ... 440 5e-123 > AT2G23120.1 | Symbols: | Late embryogenesis abundant protein, group 6 | chr2:9842043-9842634 FORWARD LENGTH=592 Length=592 Score = 440 bits (238), Expect = 5e-123 Identities = 323/361 (89%), Gaps = 17/361 (5%) Strand=Plus/Plus Query 26 ACGACGGAGAAGAAAACAGAGCAAGTGAAAGACAACGACTTACCAACCAATAGCCCTTAC 85 ||||||||||||||||| ||||||||||||||||||||||| || ||| ||||||||||| Sbjct 96 ACGACGGAGAAGAAAACGGAGCAAGTGAAAGACAACGACTTGCCGACCGATAGCCCTTAC 155 Query 86 ATGGCCACAGGTACTTTGGAAGATTACAAACTGAAAGCTTATGGAGCCGAAGGTCACCAA 145 ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 156 ATGGCGACGGGTACTTTGGAAGATTACAAATTGAAAGCTTATGGAGCCGAAGGTCACCAA 215 Query 146 GAACCTACGCCTGGTCTTGGAGGTGGCTCCACCGATGCTCCTACTCCTTCTGGCGACAAA 205 || ||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 216 GAGCCTACTCCTGGTCTTGGAGGTGGCTCCACCGATGCTCCTACTCCTTCTGGCGACGCA 275 Query 206 CCCGCCGCCACCACCACTGGA-GCCAAAGCTCCGTGAAAAATAA-AA-GACTATAATAAT 262 ||||||||||| ||||| | | || |||||||||||||||| || || |||||||||||| Sbjct 276 CCCGCCGCCACTACCACCG-ATGCGAAAGCTCCGTGAAAAAAAAGAAAGACTATAATAAT 334 Query 263 GAACGGGTTTTGTGGATCTTCGGaaaaaaagaaaaaaaCCCAAAATTGTAGTATTGTTCA 322 |||||||||||||||||| |||||||| || | |||| ||||||||||| ||||| Sbjct 335 GAACGGGTTTTGTGGATCGTCGGAAAACAA-A------CCCATAATTGTAGTAT-GTTCA 386 Query 323 ATAACTGATCCAGCTTCTTTTTATTTCTTAACGTTTTTATGGTTTGACTAAAAATGTATT 382 ||||||||||||||||| ||| ||||||||||||||||||| | |||||||||||| Sbjct 387 ATAACTGATCCAGCTTCGTTT-----CTTAACGTTTTTATGGTTTAATTAAAAATGTATT 441 Query 383 T 383 | Sbjct 442 T 442 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 19755225357 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5