BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481314 Length=1331 Score E Sequences producing significant alignments: (Bits) Value AT2G24580.1 | Symbols: | FAD-dependent oxidoreductase family p... 1969 0.0 > AT2G24580.1 | Symbols: | FAD-dependent oxidoreductase family protein | chr2:10444790-10446242 REVERSE LENGTH=1453 Length=1453 Score = 1969 bits (1066), Expect = 0.0 Identities = 1250/1339 (93%), Gaps = 12/1339 (1%) Strand=Plus/Plus Query 1 AAAGAGCAGCAACAACAACCACACGCTTCTCTAACAT-AAACCAAGCCTCTCTTTCACTT 59 |||||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct 1 AAAGAGCATCAACAACAACCACACGCTTCTCAAACATCAAACCAAGCCTCTCTTTCACTT 60 Query 60 CCTCATGGAATATTCCGGCGATGGCAGATTCGACGTGATTGTCGTCGGAGCAGGCGTTAT 119 ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||| ||||| Sbjct 61 CCTCATGGAATATTCCGACGACGGCAGATTCGACGTGATTGTCGTTGGAGCAGGAGTTAT 120 Query 120 GGGAAGCTCCGCCGCGTACCAGCTGGCGAAAAGAGGCCAGAAGACTCTCCTCTTAGAGCA 179 |||||||||||||||||| |||||||| |||||||||||||||||||| | |||||||| Sbjct 121 GGGAAGCTCCGCCGCGTATCAGCTGGCAAAAAGAGGCCAGAAGACTCTTTTGTTAGAGCA 180 Query 180 ATTCGATTTCCTCCACCACCGTGGCTCTTCTCACGGTGAGTCACGCACCATCCGTGCCAC 239 ||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||| Sbjct 181 ATTCGATTTCCTCCATCACCGTGGCTCTTCTCACGGCGAGTCACGCACCATACGTGCCAC 240 Query 240 TTACCCGGAGGATTACTACTACGCCATGGTTTCCGAGTCGACTAGGTTATGGGCTGAC-G 298 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||| | | Sbjct 241 TTACCCGGAGGATTACTACTACTCCATGGTTTCCGAGTCGACTCGGTTATGGGCTG-CGG 299 Query 299 CTCAGTCCGAGATCGGATACAAAGTCCATTTCCCAACTCAACAATTCGATATGGGTCCAG 358 ||||||||||||| ||||||||||| ||||| ||||||||||||||||| |||||||| | Sbjct 300 CTCAGTCCGAGATTGGATACAAAGTTCATTTTCCAACTCAACAATTCGACATGGGTCCGG 359 Query 359 CTGATCAGCAGAGTCTCCTCTCTGTTGTTGCCACTTGTCAAAAACACGCGCTAGCTCATC 418 | |||||||||||||||||||| ||||| ||||| ||||||||||||| ||||||||||| Sbjct 360 CAGATCAGCAGAGTCTCCTCTCCGTTGTGGCCACGTGTCAAAAACACGGGCTAGCTCATC 419 Query 419 GGGTTATGGACTCTCATGCTGTTTCCGAGCATTTCTCCGGGAGGATTAGTATCCCGGAGA 478 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 420 GGGTTATGGATTCTCATGCAGTTTCCGAGCATTTCTCCGGGAGGATTAGTATCCCGGAGA 479 Query 479 ATTGGATCGGAGTCTCGACGGAACTTGGTGGGGTTATTAAACCCACCAAGGCCGTCTCCA 538 ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||| Sbjct 480 ATTGGATCGGAGTTTCGACGGAACTTGGTGGGATTATCAAACCCACCAAGGCCGTCTCCA 539 Query 539 TGTTTCAGACGCTTGCGTTTGGACATGGCGCTGTCTTAAGAGACAACACCAAAGTTGCAA 598 ||||||||||||||||| |||||||||| || ||||||||||||||||||||||||||| Sbjct 540 TGTTTCAGACGCTTGCGATTGGACATGGTGCCATCTTAAGAGACAACACCAAAGTTGCAA 599 Query 599 ACATAAAGAGAGACGGTGAAAACGGGGAAGGGGTAATAGTTTGCACTGTGAAAGGAGATA 658 ||||||||||||| ||||||| ||||||||||||||||| ||||| ||||||||||||| Sbjct 600 ACATAAAGAGAGATGGTGAAAGTGGGGAAGGGGTAATAGTCTGCACGGTGAAAGGAGATA 659 Query 659 AGTTCTACGGTAAAAAATGCATTGTAACCGCGGGTGCATGGATAAGTAAGCTGGTGAAAA 718 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 660 AGTTCTACGGTAAAAAATGCATTGTAACCGCGGGTGCATGGATAAGTAAGCTGGTGAAAA 719 Query 719 CGGTGGCCGGGATAAATTTTCCGGTGGAGCCGCTTGAGACGACTGTTTATTATTGGAGAA 778 |||||||||||||| |||||||||||||||| |||||||| || || | ||||||||||| Sbjct 720 CGGTGGCCGGGATAGATTTTCCGGTGGAGCCCCTTGAGACTACGGTGTGTTATTGGAGAA 779 Query 779 TCAAAGAAGGCCACGAGGAGAAATTCACGATCGACGGAGAGTTTCCAACTTTTGCGTCAT 838 ||||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||| Sbjct 780 TCAAAGAAGGCCACGAGGAGAAATTCACGATAGACGGAGAGTTTCCGACTTTCGCGTCAT 839 Query 839 ACGGAGTTCCGTACGTGTACGGAACTCCGTCATTAGAGTATCCGGGACTGATCAAAGTGG 898 |||||| |||||| ||||||||||||||||| || ||||||||||||||||||||||||| Sbjct 840 ACGGAGCTCCGTATGTGTACGGAACTCCGTCTTTGGAGTATCCGGGACTGATCAAAGTGG 899 Query 899 CGGTTCACGGTGGTTATTGGTGTGATCCGGATAAGAGGCCATGGGGACCAGGAGTGAAGC 958 |||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 900 CGGTTCACGGTGGTTATTGGTGCGATCCGGATAAGAGGCCATGGGGGCCAGGAGTGAAGT 959 Query 959 TAGAGGAGCTTAAAGAGTGGATAAAGGAGAGATTTGGAGGGATGGTTGATTCGGAAGGAC 1018 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 960 TAGAGGAGCTTAAAGAGTGGATAAAGGAGAGATTTGGAGGGATGGTTGATTCCGAAGGAC 1019 Query 1019 CGGTGGCGACTCAGCTTTGTATGTATTCAATGACCCCGGACGAGGATTTCGTTATTGATT 1078 | |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||| Sbjct 1020 CCGTGGCGACTCAGCTTTGTATGTATTCGATGACACCGGACGAGGATTTCGTGATTGATT 1079 Query 1079 TTCTTGGAGGGGAGTTAGGGAGAGATGTTGTTGTGGGTGGAGGGTTTTCCGGTCATGGGT 1138 |||||||||||||||| ||||||||||| || || || || ||||||||||||||||| | Sbjct 1080 TTCTTGGAGGGGAGTTTGGGAGAGATGTGGTGGTAGGCGGCGGGTTTTCCGGTCATGGTT 1139 Query 1139 TTAAGATGGCGCCGGCAGTGGGGAGGATATTGGCGGATATGGCGATGGAAGGAG-AGGCC 1197 |||||||||||||||| |||||||||||| ||||||||||||||||||| || | ||||| Sbjct 1140 TTAAGATGGCGCCGGCGGTGGGGAGGATACTGGCGGATATGGCGATGGA-GGTGGAGGCC 1198 Query 1198 AGAGG---AGGAGTGGAGATGAAACAGTTTAGTCTCCGACGGTTTGAAGAGAATCCTAAA 1254 |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1199 GGAGGTGGAGGAGTTGAGATGAAACAGTTTAGTCTCCGACGGTTTGAAGATAATCCTAAA 1258 Query 1255 GGGAATGTAAAGGAGTATCCTGACCAAGTGATACTTGAT-TGCCCGTTGAAACATTAAA- 1312 || |||| ||||||||||||||||||||||||||||||| | ||| ||||||||||||| Sbjct 1259 GGAAATGCAAAGGAGTATCCTGACCAAGTGATACTTGATGT-CCCATTGAAACATTAAAC 1317 Query 1313 TTTGGTTACAAAATGTCAA 1331 |||| |||||||||||||| Sbjct 1318 TTTG-TTACAAAATGTCAA 1335 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 65511711225 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5