BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481501 Length=1640 Score E Sequences producing significant alignments: (Bits) Value AT2G26440.1 | Symbols: | Plant invertase/pectin methylesterase... 2300 0.0 > AT2G26440.1 | Symbols: | Plant invertase/pectin methylesterase inhibitor superfamily | chr2:11247383-11249493 FORWARD LENGTH=1754 Length=1754 Score = 2300 bits (1245), Expect = 0.0 Identities = 1468/1577 (93%), Gaps = 10/1577 (1%) Strand=Plus/Plus Query 69 TTCTCTAAAACCTAATCAAACCTCT-CTAACAAGTTTCTGCATGAACACACCATATCCAA 127 ||||||||| ||| || |||| ||| || ||||||||||||| ||||||||||||||| Sbjct 108 TTCTCTAAACCCTCATGAAACTTCTGCT-ACAAGTTTCTGCAAAAACACACCATATCCAG 166 Query 128 ATGCATGTTTCGA-CTCCTTAAAACTTTCCATCTCCATCAACATAAGCCCCAACATTCTC 186 |||||||||| | |||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 167 ATGCATGTTT-TACCTCCTTAAAACTATCCATCTCCATCAACATAAGCCCCAACATTCTC 225 Query 187 TCTTTCCTCCTTCAAACCCTCCAAACAGCTCTTTCCGAGGCCGGAAAACTCACCGATCTT 246 ||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||| Sbjct 226 TCTTTCCTCCTCCAAACCCTCCAAACAGCTCTTTCCGAGGCTGGGAAACTCACCGATCTC 285 Query 247 CTTTCCGGAGCTGGAATCTCCAACAACCTCGTTGAGGGGCAACGTGGCTCTCTTCAAGAC 306 ||||| || ||||| ||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 286 CTTTCTGGCGCTGGGGTCTCCAACAACCTAGTTGAGGGACAACGTGGCTCTCTTCAAGAC 345 Query 307 TGCAAAGATCTTCACCAGATCACTTCTTCCTTCTTAAAACGATCCATCTCCAAGATCCAA 366 ||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||||||||| Sbjct 346 TGCAAAGATCTTCACCACATCACTTCTTCTTTCTTGAAACGATCAATCTCCAAGATCCAA 405 Query 367 GACGGTGTTAACGATTCAC-GAAAGCTAGCTGACGCTAGAGCGTACCTGAGCGCCGCTCT 425 ||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||||||||| Sbjct 406 GACGGTGTTAACGATTCACGGAAA-CTAGCCGACGCTAGAGCGTACCTAAGCGCCGCTCT 464 Query 426 CACCAACAAGATCACTTGCTTGGAAGGTCTTG-ATACAGCCTCTGGTCCTCTAAAGCCAA 484 ||||||||||||||| |||||||||||||||| || ||||||| ||||| || ||||||| Sbjct 465 CACCAACAAGATCACATGCTTGGAAGGTCTTGAAT-CAGCCTCAGGTCCACTCAAGCCAA 523 Query 485 AGCTCGTGACCTCCTTCACGGA-AACTTACAAACACGTAAGCAACTCCCTCTCTGCTCTA 543 ||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| Sbjct 524 AGCTCGTGACCTCCTTCAC-GACCACTTACAAACACATAAGCAACTCCCTCTCTGCTCTT 582 Query 544 CCAAAACAGGGAAGAGCCACAAATCTGAAAACCGACGGCAAGACTAAGAACCGCCGGTTA 603 ||||||||| ||||| ||||||||| ||||||| ||| || |||||||||||||||||| Sbjct 583 CCAAAACAGAGAAGAACCACAAATCCAAAAACCGGCGGAAACACTAAGAACCGCCGGTTA 642 Query 604 TTTGGGTTATTACCTGACTGGGTCTCTAAGAAAGATCACCGGTTTTTAGAGGATTCTAGT 663 |||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||| Sbjct 643 CTTGGGTTATTTCCTGACTGGGTCTATAAGAAAGATCACCGGTTTTTAGAAGATTCTAGC 702 Query 664 GACGGGTATGATGAGTACGACCCGAGTGAGATCATCGTGGTTGCTGCCGATGGAACAGGG 723 ||||||||||||||||| ||||||||||||| | ||||||| |||||||||||||||||| Sbjct 703 GACGGGTATGATGAGTATGACCCGAGTGAGAGCCTCGTGGTCGCTGCCGATGGAACAGGG 762 Query 724 AATTTTTCGACCATTAACGAGGCCATAAGCTTTGCTCCGGATATGAGTAACGACAGGGTA 783 ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 763 AATTTTTCGACTATTAACGAGGCCATAAGCTTTGCTCCTAATATGAGTAACGACAGGGTG 822 Query 784 CTGATATATGTAAGGGAAGGTGTGTATGACGAGAACATTGAGATTCCGATCTACAAGACT 843 ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 823 CTGATATATGTAAAGGAAGGTGTGTATGACGAGAACATTGATATTCCGATCTACAAGACT 882 Query 844 AATATTGTTCTGATCGGAGATGGATCCGATGTTACATTTATTACCGGAAACCGAAGTGTA 903 ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 883 AATATTGTTTTGATAGGAGATGGATCCGATGTTACATTTATTACCGGAAACCGAAGTGTC 942 Query 904 GGAGATGGATGGACCACTTTCCGATCTGCTACTCTTGCGGTTTCGGGCGAAGGATTCTTG 963 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 943 GGAGATGGATGGACCACTTTCCGATCTGCTACTCTTGCGGTTTCCGGCGAAGGATTCTTG 1002 Query 964 GCGAGGGACATGATGATAACGAACACAGCGGGACCCGAGAAGCATCAAGCGGTTGCGTTA 1023 |||||||| || |||||||| |||||||| |||||||||||||| ||||||||||| || Sbjct 1003 GCGAGGGATATAATGATAACAAACACAGCAGGACCCGAGAAGCACCAAGCGGTTGCACTA 1062 Query 1024 CGTGTGAACGCGGATTTTGTGGCCTTATATCGATGTGTCATTGATGGTTACCAGGACACA 1083 || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1063 CGAGTGAACGCGGATTTTGTGGCCTTATACCGATGTGTCATTGATGGTTACCAGGACACA 1122 Query 1084 CTTTACACCCACTCATTCCGACAATTCTACCGCGAATGCGATATTTATGGAACCATTGAT 1143 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1123 CTTTACACCCACTCATTCCGACAATTCTACCGTGAATGCGATATTTATGGAACCATTGAT 1182 Query 1144 TATATCTTTGGGAACGCGGCCGTGGTCTTCCAGGGATGCAACATCGTTTCAAAGTTGCCT 1203 ||||||||||| ||||| ||||| |||||||| || || ||||||||||||||||||||| Sbjct 1183 TATATCTTTGGAAACGCAGCCGTTGTCTTCCAAGGCTGTAACATCGTTTCAAAGTTGCCT 1242 Query 1204 ATGCCAGGACAATTCACTGTAGTAACTGCTCAATCACGGGACAGTCCCGACGAAGACACC 1263 ||||||||||||||||| ||| | |||||||| ||||| |||| || |||||||| ||| Sbjct 1243 ATGCCAGGACAATTCACGGTAATTACTGCTCAGTCACGAGACACTCAGGACGAAGATACC 1302 Query 1264 GGGATCTCGATGCAAAACTGCTCCATTCTTGCATCGGATGATTTATTTAACAGCTCAAAT 1323 |||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct 1303 GGGATCTCGATGCAAAACTGCTCCATCCTTGCGTCGGAGGATTTATTTAATAGCTCAAAT 1362 Query 1324 AGAGTAAAGAGCTACTTGGGACGTCCGTGGAGAGGATTTTCAAGAACAGTTCTAATGGAA 1383 | ||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1363 AAAGTGAAGAGCTACTTGGGACGTCCGTGGAGAGAATTTTCAAGAACAGTTGTAATGGAA 1422 Query 1384 TCTTATATTGATGAGTTTATTGACGGTTCGGGTTGGAGCAAATGGAACGGTAGGGAAGGA 1443 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct 1423 TCTTATATTGATGAGTTTATTGACGGTTCGGGTTGGAGCAAATGGAACGGTGGGGAAGCA 1482 Query 1444 CTTGATACCCTTTACTATGGCGAGTATAACAATAACGGGCCGGGTTCTGAAACGGGTAAA 1503 |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||| Sbjct 1483 CTTGATACCCTTTACTATGGCGAGTATAACAATAACGGTCCGGGTTCTGAAACGGTTAAA 1542 Query 1504 CGGGTTAACTGGCCGGGTTTTCACATTATGGGTTACGAAGATGCCTTTAACTTCACGGCA 1563 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1543 CGGGTTAACTGGCCGGGTTTTCACATTATGGGTTACGAAGATGCCTTTAACTTCACGGCA 1602 Query 1564 ACAGAGTTTATCACCGGTGATGGTTGGTTGGGTAGTACTTCGTTCCCTTATGATAATGGA 1623 |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1603 ACAGAGTTTATCACTGGTGATGGTTGGTTGGGAAGTACTTCGTTCCCTTATGATAATGGA 1662 Query 1624 ATTTAACAACttttttt 1640 |||||||| ||||||| Sbjct 1663 ATTTAACATTTTTTTTT 1679 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81023679630 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5