BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481615 Length=1808 Score E Sequences producing significant alignments: (Bits) Value AT2G27200.1 | Symbols: | P-loop containing nucleoside triphosp... 2630 0.0 AT1G08410.1 | Symbols: | P-loop containing nucleoside triphosp... 1295 0.0 > AT2G27200.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr2:11625417-11628189 FORWARD LENGTH=1876 Length=1876 Score = 2630 bits (1424), Expect = 0.0 Identities = 1643/1745 (94%), Gaps = 30/1745 (2%) Strand=Plus/Plus Query 1 AAGGTCTCAGCC-GAGAAGAAAATGGGGAAGAACGAGAAAACATCTCTAGGTCGAGCTTT 59 ||||| ||| || |||||||||||||||||||||||||||||||||||||||||||| || Sbjct 12 AAGGTTTCA-CCGGAGAAGAAAATGGGGAAGAACGAGAAAACATCTCTAGGTCGAGCCTT 70 Query 60 AGTGAAGCACCATAACCATATGATCCAAGAAACCAAGGAAAAAGGCAAATCCTACAAAGA 119 ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 71 AGTGAAGCACCATAACCATATGATCCAGGAAACCAAGGAAAAAGGCAAATCCTACAAAGA 130 Query 120 TCAACACAAGAAGGTTCTAGAATCTGTAACCGAAGTCAGCGACATCGATGCCATCATCGA 179 |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct 131 TCAACACAAGAAGGTTCTAGAATCCGTGACCGAAGTCAGCGACATCGATGCCATCATCGA 190 Query 180 ACAAGCCGAGGAAGCTGAACGGCTTTTCGCGATTCATCACGATTCCGCAACGCCTGTTCC 239 ||||||||| ||||||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct 191 ACAAGCCGAAGAAGCTGAACGTCTTTTCGCGATTCATCACGATTCCGCAACTCCTGTTCC 250 Query 240 TATCAATATGGACACAGGTTCGAGTTCAAGTGGTATAACAGCTAAAGAATGGAAAGACCA 299 |||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| || Sbjct 251 TATCAATATGGATACAGGTTCGAGTTCGAGTGGCATAACAGCTAAAGAATGGAAAGAGCA 310 Query 300 AAGGATGAGAGAAGAGGCTTTACATGCTAGTAGTCTTCAAGTTCCTCGAAGACCTCATTG 359 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 311 AAGGATGAGAGAAGAGGCTTTACATGCTAGTAGTCTTCAAGTTCCTCGTAGACCTCATTG 370 Query 360 GACACCTAAAATGAATGTGGA-ACAACTTGATGCTAATGAAAGACAAGCTTTTCTTACTT 418 ||||||||||||||||||||| | |||||||||||||||||| |||||||||||| |||| Sbjct 371 GACACCTAAAATGAATGTGGAGA-AACTTGATGCTAATGAAAAACAAGCTTTTCTCACTT 429 Query 419 GGCGACGGAAACTTGCGAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGA 478 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 430 GGCGACGGAAACTTGCGAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGA 489 Query 479 AGAACCTTGACATCTGGAGACAACTTTGGCGAGTGCTTGAACGAAGTGATTTGATTGTTA 538 |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 490 AGAACCTTGATATCTGGAGACAACTTTGGCGAGTGCTTGAACGTAGTGATTTGATTGTTA 549 Query 539 TGGTTGTTGATGCTAGAGATCCTCTGTTTTACCGTTGTCCTGATCTTGAGGCATATGCAC 598 |||||||||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct 550 TGGTTGTTGATGCTAGAGATCCTCTGTTTTACCGCTGCCCTGATCTTGAGGCATATGCAC 609 Query 599 AAGAAATTGATGAGCATaaaaaaaCAATGCTTCTGGTCAACAAGGCGGATTTGTTACCTT 658 |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| Sbjct 610 AAGAAATTGATGAGCATAAAAAAACAATGCTTCTGGTCAACAAGGCAGATCTGTTACCTT 669 Query 659 CTTATGTCAGGGAGAAATGGGCGGAATACTTCTCCCGCAACAATATTCTGTTCGTCTTCT 718 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 670 CTTATGTCAGGGAGAAATGGGCGGAATACTTCTCCCGCAACAATATTCTGTTTGTCTTCT 729 Query 719 GGTCAGCCAAAGCTGCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAG 778 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 730 GGTCAGCCAAAGCTGCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAG 789 Query 779 CACCTGATACCTCTCAGAAGACAGATAACCCAGCTGTGAAAGTATATGGAAGGGATGAGC 838 ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| || | Sbjct 790 CACCTGATACCACACAGAAGACAGATAACCCAGCTGTGAAAGTATATGGAAGGGACGACC 849 Query 839 TTTTGGCTCGATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAGGAG 898 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 850 TTTTGGATCGATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAGGAG 909 Query 899 TTTCCGCAACTGCTGCTGAATCACACCGCGAACAAGTTGTGGTTGGCTTTGTTGGGTACC 958 ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 910 TTTCCGCAACTTCTACTGAATCACACTGCGAACAAGTTGTGGTTGGCTTTGTTGGGTACC 969 Query 959 CGAATGTGGGAAAGAGTTCGACAATCAACGCGTTGGTAGGTCAGAAGCGAACAGGTGTCA 1018 |||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 970 CGAATGTGGGGAAGAGTTCGACAATCAACGCATTGGTAGGTCAGAAGCGAACTGGTGTCA 1029 Query 1019 CATCTACCCCCGGGAAAACGAAGCATTTCCAGACATTGATAATCTCCGAGGATCTAATGC 1078 ||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| Sbjct 1030 CATCTACCCCCGGGAAAACAAAGCATTTCCAGACATTGATAATCTCTGAGGATCTAATGC 1089 Query 1079 TCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATGATTG 1138 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1090 TCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATGGTTG 1149 Query 1139 CTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCGTGAAGCTATTAAGGTTGTGG 1198 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1150 CTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCTTGAAGCTATTAAGGTTGTGG 1209 Query 1199 CTGAACGTGTTCCTCGGCATGCCATTGAGGATGTGTACAACATCTCTCTACCTAAACCCA 1258 |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1210 CTGAACTTGTTCCTCGACATGCCATTGAGGATGTGTACAACATCTCTCTACCTAAACCCA 1269 Query 1259 AAAGCTATGAGCCTCAGTCACGCCCACCACTTGCATCAGAGCTTCTAAGAACTTACTGCC 1318 || |||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||| Sbjct 1270 AATCCTATGAACCTCAGTCCCGCCCACCTCTTGCCTCAGAGCTTCTAAGAACTTACTGCC 1329 Query 1319 TTTCTCGTGGCTATGTTGCCTCTAGTGGACTACCTGATGAGACAAGAGCAGCTAGGCAGA 1378 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1330 TCTCTCGTGGTTATGTTGCCTCTAGTGGACTACCTGATGAGACTAGAGCAGCTAGGCAGA 1389 Query 1379 TTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCCTCCAGAGATAACAC 1438 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1390 TTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCCTCCAGAGATAACCC 1449 Query 1439 GAGATGATGAAAACGAGACAGCGGATGATAATATGGGAGCCGAAACACGAGAAGGTTCAC 1498 |||||||||||||||||||||||||||| | | |||||||||||||| |||||||||||| Sbjct 1450 GAGATGATGAAAACGAGACAGCGGATGACACTTTGGGAGCCGAAACAAGAGAAGGTTCAC 1509 Query 1499 AGCCTGAGGAGGAAGGCAAAGAAGCTACTGGCCTTGGTCTTGGTCTTGATCAAGTTCTAG 1558 || ||||| || |||| |||||||| | | | | ||||||||||||||||||||||| Sbjct 1510 AGACTGAGAAGAAAGGTGAAGAAGCT-C---C-TAG-TCTTGGTCTTGATCAAGTTCTAG 1563 Query 1559 ATGATCTGAGCTCGTTTGATCTTGCAAATGGAATTGGGTCTAACAAAAAGAAACAGCACA 1618 ||||||| |||||||||||||||||||||||| ||| |||| ||||| ||||||||||| Sbjct 1564 ATGATCTTAGCTCGTTTGATCTTGCAAATGGACTTGTGTCTTCCAAAACGAAACAGCACA 1623 Query 1619 AGAAGTCACATAGAAAACCATGATTCGGTC--G------C-C-AGTGCTGAGAGGTTTCC 1668 ||||||||||||| |||| ||||||||||| | | | | | ||||||| ||||| Sbjct 1624 AGAAGTCACATAGGAAACAATGATTCGGTCTTGATGGAACGCCAATTCTGAGAGTTTTCC 1683 Query 1669 AGAAATCACAATGCATTGAACAACAAATGCTGGAATATATGATACAGTTGTGGATTTTTC 1728 |||| | | | || ||||||||||| |||||||||||||||||||||||||||| Sbjct 1684 TGAAA-C-C---G-AT----CAACAAATGCTCGAATATATGATACAGTTGTGGATTTTTC 1733 Query 1729 TTATT 1733 ||||| Sbjct 1734 TTATT 1738 > AT1G08410.1 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:2646189-2649379 FORWARD LENGTH=2161 Length=2161 Score = 1295 bits (701), Expect = 0.0 Identities = 1200/1436 (84%), Gaps = 54/1436 (4%) Strand=Plus/Plus Query 22 ATGGGGAAGAACGAGAAA-ACATC-TCTAGGTCGAGCTTTAGTGAAGCACCATAACCATA 79 |||||||||| ||| ||| || || | | || ||| | | ||||||||||| ||||||| Sbjct 119 ATGGGGAAGAGCGA-AAAGACGTCGT-TGGGGCGATCACTCGTGAAGCACCACAACCATA 176 Query 80 TGATCCAAGAAACCAAGGAAAAAGGCAAATCCTACAAAG-ATCAACACAAGAAGGTTCTA 138 |||| |||||| |||| || |||||||| | |||| ||| ||| ||| ||||| ||||| Sbjct 177 TGATACAAGAATCCAAAGACAAAGGCAAGTACTAC-AAGAATCTACAGAAGAAAGTTCTC 235 Query 139 GAATCTGTAACCGAAGTCAGCGACATCGATGCCATCATCGAACAAGCCGAGGAAGCTGAA 198 |||||||| || || ||||| |||||||| |||||||| || ||||| ||||| || || Sbjct 236 GAATCTGTGACTGAGGTCAGTGACATCGACGCCATCATTGAGCAAGCTGAGGAGGCAGAG 295 Query 199 CGGCTTTTCGCGATTCATCACGA-TTCCGCAACGCCTGTT-CCTATCAATATGGACACAG 256 || |||| | | ||| ||||| | ||| | || ||| || |||||||| | |||||| Sbjct 296 CGTCTTTACACCATTAATCAC-AGCTCCTCCACACCT-TTGTCTATCAATCTAGACACAA 353 Query 257 GTTCGAGTTCAAGTGGTATAACAGCTAAAGAATGGAAAGACCAA-AGGATGAGAGAAGAG 315 ||| || ||||||| |||| ||||| ||||||||| ||| ||| | || || ||| ||| Sbjct 354 ATTCTAGCTCAAGTGTTATAGCAGCTGAAGAATGGAGAGAGCAACA-GAAGATAGAGGAG 412 Query 316 GCTTTACATGCTAGTAGTCTTCAAGTTCCTCGAAGACCTCATTGGACACCTAAAATG-AA 374 |||||||| || |||||||||||||| ||||||||||||| ||||||||| ||||| | Sbjct 413 GCTTTACACGCCAGTAGTCTTCAAGTACCTCGAAGACCTCCGTGGACACCTGAAATGTCA 472 Query 375 TGTGGAACAACTTGATGCTAATGAAAGACAAGCTTTTCTTACTTGGCGACGGAAACTTGC 434 |||||| |||||||||||||||||| |||||||||||| | |||||| |||| |||| Sbjct 473 -GTGGAAGAACTTGATGCTAATGAAAAACAAGCTTTTCTAAATTGGCGCCGGATGCTTGT 531 Query 435 GAGCCTCGAGGAAAATGAAAAGCTTGTGTTGACACCATTCGAGAAGAACCTTGACATCTG 494 |||||| ||||||||||||||||| |||||||| |||||||| ||||||||||||||||| Sbjct 532 GAGCCTTGAGGAAAATGAAAAGCTAGTGTTGACTCCATTCGAAAAGAACCTTGACATCTG 591 Query 495 GAGACAACTTTGGCGAGTGCTTGAACGAAGTGATTTGATTGTTATGGTTGTTGATGCTAG 554 |||||| |||||| ||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 592 GAGACAGCTTTGGAGAGTGCTTGAACGCAGTGATTTGATTGTTATGGTAGTTGATGCTAG 651 Query 555 AGATCCTCTGTTTTACCGTTGTCCTGATCTTGAGGCATATGCACAAGAAATTGATGAGCA 614 |||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||||| Sbjct 652 AGATCCACTGTTTTACCGCTGCCCTGATCTTGAGGCATATGCTCAAGAAATTGATGAGCA 711 Query 615 TaaaaaaaCAATGCTTCTGGTCAACAAGGCGGAT-TTGTTACCTTCTTATGTCAGGGAGA 673 |||||||| ||||||||| || |||||||||||| || |||||| || |||||||||||| Sbjct 712 TAAAAAAATAATGCTTCTAGTGAACAAGGCGGATCTT-TTACCTACTGATGTCAGGGAGA 770 Query 674 AATGGGCGGAATACTTCTC-CCGCAACAATATTCTGTTCGTCTTCTGGTCAGCCAAAGCT 732 ||||||| ||||| ||| | || ||||| |||||||| || ||||||||||||| |||| Sbjct 771 AATGGGCAGAATATTTC-CGCCTTAACAACATTCTGTTTGTTTTCTGGTCAGCCATAGCT 829 Query 733 GCTACGGCTACCCTAGAAGGTAAACCCCTGAAAGAACAGTGGAGAGC-ACCTGATACCTC 791 ||||| |||||||||||||||||| | ||||||| || |||||| | ||| |||| || Sbjct 830 GCTACAGCTACCCTAGAAGGTAAAGTCTTGAAAGAGCAATGGAGA-CAACCCGATAACT- 887 Query 792 T-CAGAAGACAGATAACCCAG-CTGTGAAAG-TATATGGAAGGGATGAGCTTTTG-GCTC 847 | |||||||||||| | |||| | | | | ||||||| || || ||||| ||| | || Sbjct 888 TGCAGAAGACAGATGATCCAGAC-AT-TATGATATATGGCAGAGACGAGCTGTTGAG-TC 944 Query 848 GATTAAAACTTGAGGCTCTAGAGATAGTAAAAATGAGGAAATCTAGAG--G-A---GTTT 901 | || || ||||||||| |||||| || ||| | ||||| ||||||| | | || | Sbjct 945 GTTTGCAATTTGAGGCTCAAGAGATTGTCAAAGTAAGGAATTCTAGAGCAGCATCCGTAT 1004 Query 902 C--CGCA-AC-T-G-CTGCTGAATCA-CACCGCGAACAAGTTGTGGTTGGCTTTGTTGGG 954 | | || | | | ||| ||||| | || || || |||| |||||||| ||||||||| Sbjct 1005 CATCACAGTCATGGACTGGTGAAT-ATCAACGTGATCAAGCCGTGGTTGGATTTGTTGGG 1063 Query 955 TACCCGAATGTGGGAAAGAGTTCGACAATCAACGCGTTGGTAGGTCAGAAGCGAACAGGT 1014 ||||| ||||| ||||||||||| |||||||| || ||||| |||||||||||||||||| Sbjct 1064 TACCCAAATGTTGGAAAGAGTTCTACAATCAATGCATTGGTGGGTCAGAAGCGAACAGGT 1123 Query 1015 GTCACATCTACCCCCGGGAAAACGAAGCATTTCCAGACATTGATAATCTCCGAGGATCTA 1074 ||||| |||||||| || ||||| |||||||||||||| ||||| ||||| || || || Sbjct 1124 GTCACCTCTACCCCAGGAAAAACAAAGCATTTCCAGACTTTGATCATCTCTGATGAGCTT 1183 Query 1075 ATGCTCTGCGATTGCCCTGGTTTAGTCTTCCCTTCATTCTCAAGCTCAAGATATGAAATG 1134 ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1184 ATGCTATGCGATTGCCCTGGTTTAGTCTTCCCTTCGTTCTCAAGCTCAAGATATGAAATG 1243 Query 1135 ATTGCTTCTGGAGTTCTTCCAATAGACCGGATGACCGAGCACCGTGAAGCTATTAAGGTT 1194 ||||||||||| || ||||| || ||||||||||| |||||||||||||||||| |||| Sbjct 1244 ATTGCTTCTGGTGTACTTCCGATTGACCGGATGACGGAGCACCGTGAAGCTATTCAGGTG 1303 Query 1195 GTGGCTGA-ACGTGTTCCTCGGCATGCCATTGAG-GATGTGTACAACATCTCTCTACCTA 1252 |||||||| | | || ||||| | || |||||| | |||||||||||| ||||| |||| Sbjct 1304 GTGGCTGACAAG-GTCCCTCGCCGTGTAATTGAGAG-TGTGTACAACATTTCTCTTCCTA 1361 Query 1253 AACCCAAAAGCTATGAGCCTCAGTCACGCCCACCACTTGCAT-CAGAGCTTCT-AAGAAC 1310 ||||||||| |||||||| |||||| ||||| || | ||| | ||||||| || || || Sbjct 1362 AACCCAAAACCTATGAGCGTCAGTCCCGCCCGCCTCATGC-TGCAGAGCT-CTTAAAAAG 1419 Query 1311 TTACTGC-CTTTCTCGTGGCTATGTTGCCTCTAGTGGACTACCTGATGAGAC-AAGAGCA 1368 |||||| ||| ||||||||||||||||||| ||||||||||| ||||| || || ||| Sbjct 1420 TTACTGTGCTT-CTCGTGGCTATGTTGCCTCGAGTGGACTACCGGATGAAACGAA-AGCT 1477 Query 1369 GCTAGGCAGATTCTGAAAGATTACATTGAAGGTAAGCTTCCACATTTTGCAATGCC 1424 || |||| |||||||||||||||||||| ||||||||| ||||||| ||||||||| Sbjct 1478 GCAAGGCTGATTCTGAAAGATTACATTGGAGGTAAGCTGCCACATTATGCAATGCC 1533 Score = 69.4 bits (37), Expect = 1e-10 Identities = 73/90 (81%), Gaps = 4/90 (4%) Strand=Plus/Plus Query 1536 TCTTGGTCTTGATCAAGTTCTAGATGATCTGAGCTCGTTTGATCTTGCAAATGGAATTGG 1595 || |||| ||||| | || ||||||||||||||||||||||||||||| ||||| || Sbjct 1654 TCCTGGTATTGATGATGTGCTAGATGATCTGAGCTCGTTTGATCTTGCCAATGGGCTTAA 1713 Query 1596 GTCTAACAAA-AA-GAAACAGCACAAGAAG 1623 |||| |||| || | |||||| |||||| Sbjct 1714 GTCTT-CAAAGAAAGTGACAGCA-AAGAAG 1741 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 89457371190 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5