BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481620 Length=2646 Score E Sequences producing significant alignments: (Bits) Value AT2G27228.1 | Symbols: CPuORF6 | conserved peptide upstream ope... 3731 0.0 AT2G27230.1 | Symbols: LHW | transcription factor-related | chr... 3334 0.0 > AT2G27228.1 | Symbols: CPuORF6 | conserved peptide upstream open reading frame 6 | chr2:11650358-11654143 FORWARD LENGTH=2706 Length=2706 Score = 3731 bits (2020), Expect = 0.0 Identities = 2442/2632 (93%), Gaps = 84/2632 (3%) Strand=Plus/Plus Query 56 TTTTATCGATGGCTGGTATTACTGGAATCTTAAAGCTTGAAGCTTGGAGCATCTTGTGAA 115 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 99 TTTTATCAATGGCTGGTGTTACTGGAATCTTAAAGCTTGAAGCTTGGAGCATCTTGTGAA 158 Query 116 CAAGA--AAC-Agtttctt-tcgtttttcttttct-ggtttttgagttttttttttctct 170 |||| ||| |||||||| | |||||||||||| || ||||||| ||||||||||||| Sbjct 159 GAAGATTAACTAGTTTCTTGT-ATTTTTCTTTTCTGGGGTTTTGAG-TTTTTTTTTCTCT 216 Query 171 tctttATTACCGGAAGTAATGGCATGTCGGAGTATGATCGCTTTTAGTTTAGATCCTGAA 230 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 217 TCCTTATTACCGGAAGTAATGGCATGTCGGAGTATGATCGCTTTTAGTTTAGATCCTGAA 276 Query 231 AGAAAACAAAGTGGAGGACTTAGAACAAAACAAGCTGGAAGAGGATCTTGCCGTGGAAGT 290 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 277 AGAAAACAAAGTGGAGGACTTAGGACAAAACAAGCTGGAAGAGGATCTTGCCGTGGAAGT 336 Query 291 TAGTCTTTGTTCAAATCCATTTTCCTCTCAATCTTCTTAAAGAATTTTGAAATTGCACTG 350 ||||||||||||||||||| || | || | |||||||||||||||||||||||||| Sbjct 337 TAGTCTTTGTTCAAATCCA--TT--T-TC---C-TCTTAAAGAATTTTGAAATTGCACTG 387 Query 351 TTGCAAGTGAAAAAGATTGTTCTTGTTGGAGCTT-----------AA-AG-AAGAGAAAA 397 ||||||||||||||| |||||||||||||||||| || || ||||||||| Sbjct 388 TTGCAAGTGAAAAAGTTTGTTCTTGTTGGAGCTTAAAGAAGAGAGAAGAGAAAGAGAAAA 447 Query 398 GCTATGGGAGTTTTACTAAGAGAAGCTTTGAGGTCTATGTGTGTTAATAATCAATGGTCT 457 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 448 GCTATGGGAGTTTTACTAAGAGAAGCTTTAAGGTCTATGTGTGTTAATAATCAATGGTCT 507 Query 458 TATGCTGTTTTCTGGAAAATTGGCTGTCAAAATTCTAGCTTGTTGATTTGGGAGGAATGC 517 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 TATGCTGTTTTCTGGAAAATTGGCTGTCAAAATTCTAGCTTGTTGATTTGGGAGGAATGT 567 Query 518 TATAATGAAACTGCATCGAGCTCGAATCCTCGAAGACTTTGTGGACTCGGTGTTGATACA 577 || |||||||| | |||||||||||||||| |||||||||||||||| |||||||||||| Sbjct 568 TACAATGAAACCGAATCGAGCTCGAATCCTAGAAGACTTTGTGGACTTGGTGTTGATACA 627 Query 578 CAAGGGAATGAGAAAGTTCAGTTGCTTACGAACCGAATGATGTTGAACAATCGAATCATT 637 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 628 CAAGGGAATGAGAAAGTTCAGTTGCTTACAAACCGAATGATGTTGAACAATCGAATCATT 687 Query 638 TTGGTTGGTGAAGGACTAGTTGGCCGAGCTGCATTTACTGGACATCATCAATGGATTCTA 697 ||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 688 TTGGTAGGTGAAGGTCTAGTTGGCCGAGCTGCATTTACTGGACATCATCAATGGATTCTA 747 Query 698 GCTAATAGTTTCAACCGCGACGTTCATCCACCCGAGGTTATTAATGAGATGCTTCTCCAA 757 ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 748 GCTAACAGTTTTAACCGCGATGTTCATCCACCCGAGGTTATTAATGAGATGCTTCTCCAA 807 Query 758 TTCTCTGCTGGTATTCAGACTGTTGCAGTTTTCCCGGTTGTTCCTCACGGTGTTGTTCAA 817 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 808 TTCTCTGCTGGTATTCAGACTGTTGCAGTTTTTCCGGTTGTTCCTCACGGTGTTGTTCAG 867 Query 818 CTCGGTTCCTCTCTGCCTATTATGGAGAATTTGGGGTTTGTGAATGACGTGAAGGGTCTT 877 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 868 CTCGGTTCCTCTCTGCCTATTATGGAGAACTTGGGGTTTGTGAATGACGTGAAGGGTCTT 927 Query 878 ATCCTGCAACTCGGATGTGTTCCCGGAGCGCTCTTATCTGAAAACTACAGAACATATGAA 937 |||||||| |||||||||||||| || || |||||||||||||||||||||||||||||| Sbjct 928 ATCCTGCAGCTCGGATGTGTTCCGGGGGCTCTCTTATCTGAAAACTACAGAACATATGAA 987 Query 938 CCTGCTGCTGATTTTATTGGAGTGCCAGTGTCTCGGATAATACCTTCTCAAGGACACAAG 997 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 988 CCTGCTGCTGATTTTATTGGAGTGCCAGTGTCTCGGATAATACCTTCTCAAGGACATAAG 1047 Query 998 ATCCTCCAATCTTCGGCTTTCGTAGCTGAAACTAGCAAACAACACTTCAACTCTACTGGA 1057 |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| Sbjct 1048 ATCCTCCAATCTTCGGCTTTCGTAGCTGAAACTAGCAAACAACATTTCAACTCCACTGGA 1107 Query 1058 TCATCAGATCATCAAAATGATCAAATGGTTGAAGAAGCTCCGTGTAATCTCGTGGATGAA 1117 ||||||| ||| ||||||||||||||||| |||| |||||||| ||||||||| Sbjct 1108 TCATCAG---ATC------ATCAAATGGTTGAAGAATCTCCCTGTAATCTTGTGGATGAA 1158 Query 1118 CAGATCAAGCAAGGAGGATGGCAAAACACAACGGGTTTTCTAACAGCTGGGGAAGTTGCA 1177 | || | ||||||||||||||| |||||| || |||||||||||||| ||||||||| Sbjct 1159 C--AT---G-AAGGAGGATGGCAAAGCACAACAGGATTTCTAACAGCTGGAGAAGTTGCA 1212 Query 1178 GTACCTTCAAATCCAGATGCGTGGCTGAATCAAAACTTCTCTTGTATGTCTAATGTGGAT 1237 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 GTACCTTCAAATCCAGATGCGTGGCTGAATCAAAACTTCTCTTGTATGTCTAATGTGGAT 1272 Query 1238 GGAGC--AG-AGCAACAAATCCCATGCGAAGACATCAGTTCCAAACACTCGCTTGGAAGC 1294 | ||| || |||||||||||||||| |||||||||||||| |||| ||||||||||||| Sbjct 1273 GCAGCAGAGCAGCAACAAATCCCATGTGAAGACATCAGTTCGAAACGCTCGCTTGGAAGC 1332 Query 1295 GATGACTTGTTTGATATGTTGGGTTTGGATGATAAGAACAAAGGTTGTGACAACAGTTGG 1354 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1333 GACGACTTGTTTGATATGTTGGGTTTGGATGATAAGAACAAAGGTTGTGACAACAGTTGG 1392 Query 1355 GGTGTTTCGCAGATGAGAACGGAAGTACTCACTAGGGAGTTATCCGACTTTCGGATCATT 1414 || ||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct 1393 GGAGTTTCACAGATGAGAACAGAAGTACTCACTAGAGAGTTATCCGACTTTCGGATCATT 1452 Query 1415 CAAGATATGGACCCTGAGTTTGGTTCTTCGGGGTATGAACTTTCAGGAACAGATCATCTG 1474 ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1453 CAAGAAATGGACCCTGAGTTCGGTTCTTCGGGGTATGAACTTTCAGGAACAGATCATCTG 1512 Query 1475 TTAGATGCCGTGGTCTCGGGTGCTTGCTCCTCCACAAAGCAGATCTCGGACGAAACATCT 1534 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct 1513 TTAGATGCCGTGGTCTCGGGTGCTTGCTCCTCCACAAAGCAGATCTCAGACGAAACTTCC 1572 Query 1535 GAGTCCTGCAAAACCACTTTGACTAAAGTTAGTAATTCTTCGGTTACCACGCCATCTCAC 1594 ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct 1573 GAGTCCTGCAAAACCACCTTGACTAAAGTTAGTAATTCTTCGGTTACCACGCCGTCTCAC 1632 Query 1595 AGTAGCCCTCAAGGTAACCAGTTATTTGAGAA-ACAACACGGGCAACCAGTGGGGCCATC 1653 |||||||||||||||| ||||||||||||||| | |||| ||||||||| |||||||||| Sbjct 1633 AGTAGCCCTCAAGGTAGCCAGTTATTTGAGAAGA-AACATGGGCAACCATTGGGGCCATC 1691 Query 1654 ATCGGTCTACGGGTCTCAGATCAGTTCTTGGGTTGAACAAGCACACAGCTTGAAGCGCGA 1713 ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || Sbjct 1692 ATCGGTCTACGGGTCTCAGATAAGTTCTTGGGTTGAACAAGCGCACAGCTTGAAGCGTGA 1751 Query 1714 GGGCAGTCCAAGGATGATGAATAACAATAAGAACGAAACTGCAAAACCGGCTAATAATCG 1773 |||||||||||||||| || ||| ||||| ||||||||||||||||||||||| || Sbjct 1752 GGGCAGTCCAAGGATGGTG---AAC---AAGAATGAAACTGCAAAACCGGCTAATAACCG 1805 Query 1774 TAAAAGACTTAAACCAGGAGAGAACCCAAGACCAAGGCCTAAAGATCGCCAGATGATCCA 1833 ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1806 GAAAAGGCTTAAACCAGGAGAGAACCCAAGACCAAGGCCTAAAGATCGCCAAATGATCCA 1865 Query 1834 AGATCGTGTCAAGGAGTTGCGTGAAATCATACCAAACGGAGCAAAATGTAGCATTGATGC 1893 |||||||||||| ||| |||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1866 AGATCGTGTCAAAGAGCTGCGTGAAATAATACCAAACGGTGCAAAATGTAGCATTGATGC 1925 Query 1894 ACTCCTGGAACGTACAATCAAGCACATGCTCTTCTTGCAAAATGTCTCGAAGCACTCTGA 1953 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| Sbjct 1926 ACTCCTTGAACGTACAATCAAGCACATGCTCTTCTTGCAAAATGTCTCCAAGCATTCTGA 1985 Query 1954 TAAGCTGAAGCAAACTGGGGAATCCAAGATTATGAAAGAGGACGGTGGAGGAGCAACATG 2013 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1986 TAAGCTGAAGCAAACCGGGGAATCCAAGATTATGAAAGAGGACGGTGGAGGAGCAACATG 2045 Query 2014 GGCTTTCGAAGTAGGGTCAAAGTCTATGGTGTGTCCAATTGTCGTAGAGGATATAAACCC 2073 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2046 GGCTTTCGAAGTAGGGTCAAAGTCTATGGTGTGTCCAATTGTCGTAGAAGATATAAACCC 2105 Query 2074 GCCTCGCATTTTCCAAGTTGAGATGTTGTGTGAACAACGAGGATTCTTCCTAGAAATCGC 2133 |||||||||||||||||| |||||||| || || |||||||||||||| ||||||||||| Sbjct 2106 GCCTCGCATTTTCCAAGTCGAGATGTTATGCGAGCAACGAGGATTCTTTCTAGAAATCGC 2165 Query 2134 GGATTGGATCAGGAGCTTAGGAATGACGATATTGAAGGGTGTCATCGAAACTCGACTTGA 2193 ||||||||||| |||||||| | ||||| |||||||| ||||||||||||||| | || Sbjct 2166 AGATTGGATCAGAAGCTTAGGGTTAACGATCTTGAAGGGAGTCATCGAAACTCGAGTAGA 2225 Query 2194 CAAGATATGGGCTCGCTTCACTGTTGAGGCGAATCGAGACATGACGAGAATGGAAATATT 2253 |||||| ||||||||||||||||||||||||| ||| ||| ||||||| ||||||||||| Sbjct 2226 CAAGATTTGGGCTCGCTTCACTGTTGAGGCGAGTCGCGACGTGACGAGGATGGAAATATT 2285 Query 2254 CATGCAACTGGTGAATATTTTGGAGCAGACAATGAAATGTGGAGGAAACTCTAAGACTAT 2313 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2286 CATGCAACTAGTGAATATTTTGGAGCAGACAATGAAATGTGGAGGAAACTCTAAGACTAT 2345 Query 2314 TTTGGATGGTATCAAAGCTACAATGCCTTTACCGGTTACTGGTGGCTGTTCAATGTAATG 2373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2346 TTTGGATGGTATCAAAGCTACAATGCCTTTACCGGTTACTGGTGGCTGTTCAATGTAATG 2405 Query 2374 ACACAAATTGTTAACCGTACCGGATTGCTCCGGTTTTAATAAACCGGTATCATTAAA-GC 2432 ||||||||| || ||||||||||||||||||||||| |||||||||| | ||||| || Sbjct 2406 ACACAAATTATTGACCGTACCGGATTGCTCCGGTTT-AATAAACCGGGCTGGTTAAAAGC 2464 Query 2433 TTGATTCATATAGAGGTTACGAGCGGACCGCTCTCAAGGATTT-AGGCTCGCTATGACTA 2491 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 2465 TTGATTCATATAGAGGTTACGAGCGGACCGCTCTCAAGGATTTTAGGCTCGCTATGACTA 2524 Query 2492 ACTTAAAAAGTCAGTCTAAAACAGAGATGATGATTTTTAAGTGt-ttttttttt-t---- 2545 ||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| | Sbjct 2525 ACT-AAAAAGTCAGTCTAAACCAGAGATGATGATTTTTAAGTGTGTTTTTTTTTCTCAAC 2583 Query 2546 t----gt-----acatta-t-gcgaattttcatttgtgtggaatttttactttttaaatt 2594 | || |||||| | ||||||||||||||||||||||||||| | || || Sbjct 2584 TTTATGTTTTGTACATTAGTTGCGAATTTTCATTTGTGTGGAATTTTT--T----AA-TT 2636 Query 2595 ttaattcagttttggactttgtaaaatttttagttaaattgtctaaaatTAT 2646 |||||||||||||||| || |||||| |||||||||||||| ||||||||| Sbjct 2637 TTAATTCAGTTTTGGAGTT-GTAAAAAATTTAGTTAAATTGTTTAAAATTAT 2687 > AT2G27230.1 | Symbols: LHW | transcription factor-related | chr2:11650358-11654116 FORWARD LENGTH=2641 Length=2641 Score = 3334 bits (1805), Expect = 0.0 Identities = 2174/2341 (93%), Gaps = 69/2341 (3%) Strand=Plus/Plus Query 332 GAATTTTGAAATTGCACTGTTGCAAGTGAAAAAGATTGTTCTTGTTGGAGCTT------- 384 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 332 GAA-TTTGAAATTGCACTGTTGCAAGTGAAAAAGTTTGTTCTTGTTGGAGCTTAAAGAAG 390 Query 385 ----AA-AG-AAGAGAAAAGCTATGGGAGTTTTACTAAGAGAAGCTTTGAGGTCTATGTG 438 || || |||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 391 AGAGAAGAGAAAGAGAAAAGCTATGGGAGTTTTACTAAGAGAAGCTTTAAGGTCTATGTG 450 Query 439 TGTTAATAATCAATGGTCTTATGCTGTTTTCTGGAAAATTGGCTGTCAAAATTCTAGCTT 498 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 451 TGTTAATAATCAATGGTCTTATGCTGTTTTCTGGAAAATTGGCTGTCAAAATTCTAGCTT 510 Query 499 GTTGATTTGGGAGGAATGCTATAATGAAACTGCATCGAGCTCGAATCCTCGAAGACTTTG 558 |||||||||||||||||| || |||||||| | |||||||||||||||| |||||||||| Sbjct 511 GTTGATTTGGGAGGAATGTTACAATGAAACCGAATCGAGCTCGAATCCTAGAAGACTTTG 570 Query 559 TGGACTCGGTGTTGATACACAAGGGAATGAGAAAGTTCAGTTGCTTACGAACCGAATGAT 618 |||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 571 TGGACTTGGTGTTGATACACAAGGGAATGAGAAAGTTCAGTTGCTTACAAACCGAATGAT 630 Query 619 GTTGAACAATCGAATCATTTTGGTTGGTGAAGGACTAGTTGGCCGAGCTGCATTTACTGG 678 |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct 631 GTTGAACAATCGAATCATTTTGGTAGGTGAAGGTCTAGTTGGCCGAGCTGCATTTACTGG 690 Query 679 ACATCATCAATGGATTCTAGCTAATAGTTTCAACCGCGACGTTCATCCACCCGAGGTTAT 738 |||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct 691 ACATCATCAATGGATTCTAGCTAACAGTTTTAACCGCGATGTTCATCCACCCGAGGTTAT 750 Query 739 TAATGAGATGCTTCTCCAATTCTCTGCTGGTATTCAGACTGTTGCAGTTTTCCCGGTTGT 798 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 751 TAATGAGATGCTTCTCCAATTCTCTGCTGGTATTCAGACTGTTGCAGTTTTTCCGGTTGT 810 Query 799 TCCTCACGGTGTTGTTCAACTCGGTTCCTCTCTGCCTATTATGGAGAATTTGGGGTTTGT 858 |||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| Sbjct 811 TCCTCACGGTGTTGTTCAGCTCGGTTCCTCTCTGCCTATTATGGAGAACTTGGGGTTTGT 870 Query 859 GAATGACGTGAAGGGTCTTATCCTGCAACTCGGATGTGTTCCCGGAGCGCTCTTATCTGA 918 ||||||||||||||||||||||||||| |||||||||||||| || || ||||||||||| Sbjct 871 GAATGACGTGAAGGGTCTTATCCTGCAGCTCGGATGTGTTCCGGGGGCTCTCTTATCTGA 930 Query 919 AAACTACAGAACATATGAACCTGCTGCTGATTTTATTGGAGTGCCAGTGTCTCGGATAAT 978 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 931 AAACTACAGAACATATGAACCTGCTGCTGATTTTATTGGAGTGCCAGTGTCTCGGATAAT 990 Query 979 ACCTTCTCAAGGACACAAGATCCTCCAATCTTCGGCTTTCGTAGCTGAAACTAGCAAACA 1038 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 991 ACCTTCTCAAGGACATAAGATCCTCCAATCTTCGGCTTTCGTAGCTGAAACTAGCAAACA 1050 Query 1039 ACACTTCAACTCTACTGGATCATCAGATCATCAAAATGATCAAATGGTTGAAGAAGCTCC 1098 ||| |||||||| ||||||||||||| ||| ||||||||||||||||| |||| Sbjct 1051 ACATTTCAACTCCACTGGATCATCAG---ATC------ATCAAATGGTTGAAGAATCTCC 1101 Query 1099 GTGTAATCTCGTGGATGAACAGATCAAGCAAGGAGGATGGCAAAACACAACGGGTTTTCT 1158 |||||||| |||||||||| || | ||||||||||||||| |||||| || ||||| Sbjct 1102 CTGTAATCTTGTGGATGAAC--AT---G-AAGGAGGATGGCAAAGCACAACAGGATTTCT 1155 Query 1159 AACAGCTGGGGAAGTTGCAGTACCTTCAAATCCAGATGCGTGGCTGAATCAAAACTTCTC 1218 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1156 AACAGCTGGAGAAGTTGCAGTACCTTCAAATCCAGATGCGTGGCTGAATCAAAACTTCTC 1215 Query 1219 TTGTATGTCTAATGTGGATGGAGC--AG-AGCAACAAATCCCATGCGAAGACATCAGTTC 1275 |||||||||||||||||||| ||| || |||||||||||||||| |||||||||||||| Sbjct 1216 TTGTATGTCTAATGTGGATGCAGCAGAGCAGCAACAAATCCCATGTGAAGACATCAGTTC 1275 Query 1276 CAAACACTCGCTTGGAAGCGATGACTTGTTTGATATGTTGGGTTTGGATGATAAGAACAA 1335 |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1276 GAAACGCTCGCTTGGAAGCGACGACTTGTTTGATATGTTGGGTTTGGATGATAAGAACAA 1335 Query 1336 AGGTTGTGACAACAGTTGGGGTGTTTCGCAGATGAGAACGGAAGTACTCACTAGGGAGTT 1395 ||||||||||||||||||||| ||||| ||||||||||| |||||||||||||| ||||| Sbjct 1336 AGGTTGTGACAACAGTTGGGGAGTTTCACAGATGAGAACAGAAGTACTCACTAGAGAGTT 1395 Query 1396 ATCCGACTTTCGGATCATTCAAGATATGGACCCTGAGTTTGGTTCTTCGGGGTATGAACT 1455 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct 1396 ATCCGACTTTCGGATCATTCAAGAAATGGACCCTGAGTTCGGTTCTTCGGGGTATGAACT 1455 Query 1456 TTCAGGAACAGATCATCTGTTAGATGCCGTGGTCTCGGGTGCTTGCTCCTCCACAAAGCA 1515 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1456 TTCAGGAACAGATCATCTGTTAGATGCCGTGGTCTCGGGTGCTTGCTCCTCCACAAAGCA 1515 Query 1516 GATCTCGGACGAAACATCTGAGTCCTGCAAAACCACTTTGACTAAAGTTAGTAATTCTTC 1575 |||||| |||||||| || ||||||||||||||||| ||||||||||||||||||||||| Sbjct 1516 GATCTCAGACGAAACTTCCGAGTCCTGCAAAACCACCTTGACTAAAGTTAGTAATTCTTC 1575 Query 1576 GGTTACCACGCCATCTCACAGTAGCCCTCAAGGTAACCAGTTATTTGAGAA-ACAACACG 1634 |||||||||||| |||||||||||||||||||||| ||||||||||||||| | |||| | Sbjct 1576 GGTTACCACGCCGTCTCACAGTAGCCCTCAAGGTAGCCAGTTATTTGAGAAGA-AACATG 1634 Query 1635 GGCAACCAGTGGGGCCATCATCGGTCTACGGGTCTCAGATCAGTTCTTGGGTTGAACAAG 1694 |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1635 GGCAACCATTGGGGCCATCATCGGTCTACGGGTCTCAGATAAGTTCTTGGGTTGAACAAG 1694 Query 1695 CACACAGCTTGAAGCGCGAGGGCAGTCCAAGGATGATGAATAACAATAAGAACGAAACTG 1754 | |||||||||||||| |||||||||||||||||| || ||| ||||| ||||||| Sbjct 1695 CGCACAGCTTGAAGCGTGAGGGCAGTCCAAGGATGGTG---AAC---AAGAATGAAACTG 1748 Query 1755 CAAAACCGGCTAATAATCGTAAAAGACTTAAACCAGGAGAGAACCCAAGACCAAGGCCTA 1814 |||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||| Sbjct 1749 CAAAACCGGCTAATAACCGGAAAAGGCTTAAACCAGGAGAGAACCCAAGACCAAGGCCTA 1808 Query 1815 AAGATCGCCAGATGATCCAAGATCGTGTCAAGGAGTTGCGTGAAATCATACCAAACGGAG 1874 |||||||||| |||||||||||||||||||| ||| |||||||||| ||||||||||| | Sbjct 1809 AAGATCGCCAAATGATCCAAGATCGTGTCAAAGAGCTGCGTGAAATAATACCAAACGGTG 1868 Query 1875 CAAAATGTAGCATTGATGCACTCCTGGAACGTACAATCAAGCACATGCTCTTCTTGCAAA 1934 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1869 CAAAATGTAGCATTGATGCACTCCTTGAACGTACAATCAAGCACATGCTCTTCTTGCAAA 1928 Query 1935 ATGTCTCGAAGCACTCTGATAAGCTGAAGCAAACTGGGGAATCCAAGATTATGAAAGAGG 1994 ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1929 ATGTCTCCAAGCATTCTGATAAGCTGAAGCAAACCGGGGAATCCAAGATTATGAAAGAGG 1988 Query 1995 ACGGTGGAGGAGCAACATGGGCTTTCGAAGTAGGGTCAAAGTCTATGGTGTGTCCAATTG 2054 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1989 ACGGTGGAGGAGCAACATGGGCTTTCGAAGTAGGGTCAAAGTCTATGGTGTGTCCAATTG 2048 Query 2055 TCGTAGAGGATATAAACCCGCCTCGCATTTTCCAAGTTGAGATGTTGTGTGAACAACGAG 2114 ||||||| ||||||||||||||||||||||||||||| |||||||| || || ||||||| Sbjct 2049 TCGTAGAAGATATAAACCCGCCTCGCATTTTCCAAGTCGAGATGTTATGCGAGCAACGAG 2108 Query 2115 GATTCTTCCTAGAAATCGCGGATTGGATCAGGAGCTTAGGAATGACGATATTGAAGGGTG 2174 ||||||| ||||||||||| ||||||||||| |||||||| | ||||| |||||||| | Sbjct 2109 GATTCTTTCTAGAAATCGCAGATTGGATCAGAAGCTTAGGGTTAACGATCTTGAAGGGAG 2168 Query 2175 TCATCGAAACTCGACTTGACAAGATATGGGCTCGCTTCACTGTTGAGGCGAATCGAGACA 2234 |||||||||||||| | |||||||| ||||||||||||||||||||||||| ||| ||| Sbjct 2169 TCATCGAAACTCGAGTAGACAAGATTTGGGCTCGCTTCACTGTTGAGGCGAGTCGCGACG 2228 Query 2235 TGACGAGAATGGAAATATTCATGCAACTGGTGAATATTTTGGAGCAGACAATGAAATGTG 2294 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 2229 TGACGAGGATGGAAATATTCATGCAACTAGTGAATATTTTGGAGCAGACAATGAAATGTG 2288 Query 2295 GAGGAAACTCTAAGACTATTTTGGATGGTATCAAAGCTACAATGCCTTTACCGGTTACTG 2354 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2289 GAGGAAACTCTAAGACTATTTTGGATGGTATCAAAGCTACAATGCCTTTACCGGTTACTG 2348 Query 2355 GTGGCTGTTCAATGTAATGACACAAATTGTTAACCGTACCGGATTGCTCCGGTTTTAATA 2414 |||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||| Sbjct 2349 GTGGCTGTTCAATGTAATGACACAAATTATTGACCGTACCGGATTGCTCCGGTTT-AATA 2407 Query 2415 AACCGGTATCATTAAA-GCTTGATTCATATAGAGGTTACGAGCGGACCGCTCTCAAGGAT 2473 |||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2408 AACCGGGCTGGTTAAAAGCTTGATTCATATAGAGGTTACGAGCGGACCGCTCTCAAGGAT 2467 Query 2474 TT-AGGCTCGCTATGACTAACTTAAAAAGTCAGTCTAAAACAGAGATGATGATTTTTAAG 2532 || ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||| Sbjct 2468 TTTAGGCTCGCTATGACTAACT-AAAAAGTCAGTCTAAACCAGAGATGATGATTTTTAAG 2526 Query 2533 TGt-ttttttttt-t----t----gt-----acatta-t-gcgaattttcatttgtgtgg 2575 ||| ||||||||| | | || |||||| | |||||||||||||||||||| Sbjct 2527 TGTGTTTTTTTTTCTCAACTTTATGTTTTGTACATTAGTTGCGAATTTTCATTTGTGTGG 2586 Query 2576 aatttttactttttaaattttaattcagttttggactttgtaaaatttttagttaaattg 2635 ||||||| | || |||||||||||||||||| || |||||| ||||||||||||| Sbjct 2587 AATTTTT--T----AA-TTTTAATTCAGTTTTGGAGTT-GTAAAAAATTTAGTTAAATTG 2638 Query 2636 t 2636 | Sbjct 2639 T 2639 Score = 355 bits (192), Expect = 1e-96 Identities = 224/238 (94%), Gaps = 7/238 (3%) Strand=Plus/Plus Query 56 TTTTATCGATGGCTGGTATTACTGGAATCTTAAAGCTTGAAGCTTGGAGCATCTTGTGAA 115 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 99 TTTTATCAATGGCTGGTGTTACTGGAATCTTAAAGCTTGAAGCTTGGAGCATCTTGTGAA 158 Query 116 CAAGA--AAC-Agtttctt-tcgtttttcttttct-ggtttttgagttttttttttctct 170 |||| ||| |||||||| | |||||||||||| || ||||||| ||||||||||||| Sbjct 159 GAAGATTAACTAGTTTCTTGT-ATTTTTCTTTTCTGGGGTTTTGAG-TTTTTTTTTCTCT 216 Query 171 tctttATTACCGGAAGTAATGGCATGTCGGAGTATGATCGCTTTTAGTTTAGATCCTGAA 230 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 217 TCCTTATTACCGGAAGTAATGGCATGTCGGAGTATGATCGCTTTTAGTTTAGATCCTGAA 276 Query 231 AGAAAACAAAGTGGAGGACTTAGAACAAAACAAGCTGGAAGAGGATCTTGCCGTGGAA 288 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 277 AGAAAACAAAGTGGAGGACTTAGGACAAAACAAGCTGGAAGAGGATCTTGCCGTGGAA 334 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 131387223717 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5