BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481760 Length=764 Score E Sequences producing significant alignments: (Bits) Value AT2G28500.1 | Symbols: LBD11 | LOB domain-containing protein 11... 1131 0.0 > AT2G28500.1 | Symbols: LBD11 | LOB domain-containing protein 11 | chr2:12186569-12188142 REVERSE LENGTH=765 Length=765 Score = 1131 bits (612), Expect = 0.0 Identities = 717/767 (93%), Gaps = 9/767 (1%) Strand=Plus/Plus Query 1 ATCAGATAAGTCCCCAAAATATTTTGAGAATCATGCTAAAGATGGAGATTACCGGTGGGG 60 |||| ||||| |||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1 ATCAAATAAGCCCCCAAAATATTTTGAGAATCATGCTAAAGATGGAGATTAACGGTGGGG 60 Query 61 TTGCTACACCTACTGCTTCCGTCGTCGCCGTCGCCACCGTGGCAGAAACCAAAACTCCTG 120 | |||||||||||||| | || ||||||||||| ||| ||||||||| ||||| | Sbjct 61 TCGCTACACCTACTGC-T---TC--CGCCGTCGCCAAGGTGACAGAAACCACCACTCCCG 114 Query 121 TTACCTCTCCTTCTCCTACCTCTTCACCTCCACCGCCACCTTCCCCGCAGCAGCCAACAC 180 ||| |||||||||||| || ||||||||||| ||||| ||||| ||||| ||||| ||| Sbjct 115 TTAACTCTCCTTCTCCCACTTCTTCACCTCCGCCGCCTCCTTCGCCGCAACAGCCGCCAC 174 Query 181 CACCGCCGGTGGTACTAAGCCCTTGTGCGGCTTGCAAGATTTTGAGGCGCCGGTGCGCCG 240 ||| ||||| ||||||||||||||||||||||||||||||||| |||| |||||||||| Sbjct 175 AACCACCGGTTGTACTAAGCCCTTGTGCGGCTTGCAAGATTTTGCGGCGGCGGTGCGCCG 234 Query 241 AGAAATGTGTTTTGGCACCGTACTTTCCTCCGACGGATCCGGCGAAGTTCACTATCGCTC 300 | ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||| Sbjct 235 ATAAATGTGTTTTGGCACCGTACTTTCCTCCTACGGACCCGGCGAAGTTCACAATCGCTC 294 Query 301 ACCGTGTCTTCGGAGCTAGCAACATTATTAAGTTCTTGCAGGAACTCCCGGAATCGCAAA 360 |||||||||| ||||||||||||||||||||||||||||||||||| || |||||||||| Sbjct 295 ACCGTGTCTTTGGAGCTAGCAACATTATTAAGTTCTTGCAGGAACTTCCAGAATCGCAAA 354 Query 361 GAACTGATGCTGTTAATAGCATGGTCTATGAAGCCGGAGCTAGGATGAGAGATCCGGTTT 420 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 355 GAACAGATGCTGTTAATAGCATGGTCTATGAAGCCGGAGCTAGGATGAGAGATCCGGTTT 414 Query 421 ACGGATGTGCGGGTGCAATTTACCATTTGCAGAGACAAGTGAGCGAGCTTCAAGCACAAC 480 |||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 415 ACGGATGTGCGGGTGCAATTTATCATTTGCAGAGACAAGTGAGTGAGCTTCAAGCACAAC 474 Query 481 TTGCGAAAACTCAAGTAGAGTTAGTAGGCATGCAACTCCAAAGATCAAGTCTACTAGAAT 540 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 475 TTGCAAAAACTCAAGTAGAGTTAGTAGGCATGCAACTCCAAAGATCAAGTCTACTAGAAT 534 Query 541 TGATATATAATATGGAGCAAACAAAGTTGTCAGCACAAGAGCAAGGACAACAGAAGATGT 600 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 535 TGATATATAATATGGAGCAAACAAAGTTGTCAGTACAAGAGCAAGGACAACAGAAGATGT 594 Query 601 CCTTCGAGAGTTCGTTTGAAAGCGGCGATGAGTTCATTAGTAGCCCCGACGAAGAGAGCA 660 |||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 595 CCTTTGAGAGTTCATTTGAAAGCGGCGATGAGTTCATTAGTAGCCCGGACGAAGAGAGCA 654 Query 661 ATGATTTGGGATTCCTTGAGGACAACAACAACAA---TAATTCATCAATGTCGTGGTGGG 717 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 655 ATGATTTGGGGTTCCTTGAGGACAACAACAACAACAATAATTCATCAATGTCGTGGTGGG 714 Query 718 ATCCTCTTTGGACATGATCATAACTTATGGTATTATTAGCTCGCTTT 764 |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 715 ATCCTCTTTGGACATGATCATAACTTATGGTATTATTAGCTCACTTT 761 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 37123034633 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5