BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481829
Length=2307
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor 2.... 1825 0.0
AT2G29100.1 | Symbols: ATGLR2.9, GLR2.9 | glutamate receptor 2.... 1197 0.0
> AT2G29110.1 | Symbols: ATGLR2.8, GLR2.8 | glutamate receptor
2.8 | chr2:12506880-12510552 REVERSE LENGTH=2844
Length=2844
Score = 1825 bits (988), Expect = 0.0
Identities = 1154/1234 (94%), Gaps = 12/1234 (1%)
Strand=Plus/Plus
Query 61 GTGAGCGCCATCATCGGACCAAGAAACTCTATGCAAGCAGAGTTTATGATCAGACTCGCC 120
||||| |||||||||||||||| | |||||||||| ||| |||||||||||| ||| |||
Sbjct 292 GTGAGTGCCATCATCGGACCAATAGACTCTATGCAGGCAAAGTTTATGATCAAACTGGCC 351
Query 121 AACAAAACTCAAGTACCAACCATCACATTCTCTGCAACAAGTCCTCTTTTAACATCCATT 180
||||||||||||||||| |||||| ||||||| |||||||| |||||||||||||||||
Sbjct 352 AACAAAACTCAAGTACCGACCATCTCATTCTCAGCAACAAGCCCTCTTTTAACATCCATC 411
Query 181 AAAAGCGATTACTTCGTCCGAGCCACTATCGATGACTCATACCAGGTCAAAGCCATTGCA 240
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 412 AAAAGCGATTACTTCGTCCGAGGCACTATCGATGACTCATACCAGGTCAAAGCCATTGCA 471
Query 241 GCCATTTTTGAATCCTTCGGATGGAGAAGTGTCGTCGCAATTTATGTGGACAACGAGTTA 300
||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 472 GCCATATTTGAATCCTTTGGATGGAGAAGTGTCGTCGCCATTTATGTGGACAACGAGTTA 531
Query 301 GGTGAAGGAATCATGCCTTACTTGTTTGACGCTTTACAAGACGTGCAAGTCGATAGAAGT 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 532 GGTGAAGGAATCATGCCTTACTTGTTTGACGCTTTACAAGACGTGCAAGTTGATAGAAGT 591
Query 361 GTGATCTCCC-CGGAGGCTAACGATGACCAGATTCTAAAAGAACTTTATAAGCTCATGAC 419
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 592 GTGATC-CCCTCGGAGGCTAACGATGACCAGATTCTAAAAGAACTTTATAAGCTCATGAC 650
Query 420 GAGGCAGACTAGGGTTTTCGTTGTCCACATGGCCTCACGTCTTGCTTCACGGATTTTTGA 479
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 651 GAGGCAGACTAGGGTTTTCGTTGTCCACATGGCATCACGTCTTGCTTCACGGATTTTTGA 710
Query 480 GAAAGCTAAAGAGATCGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAATGGAAT 539
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 711 GAAAGCTACAGAGATTGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAATGGAAT 770
Query 540 GACGCATATGATGAGACATATCAACCATGGTCGTAGCTTAAATAATATAGAGGGCGTGTT 599
||| |||||||||||||||||| | ||||||||||||||||||| |||||| ||||||||
Sbjct 771 GACTCATATGATGAGACATATCCATCATGGTCGTAGCTTAAATACTATAGATGGCGTGTT 830
Query 600 AGGTGTGAGGAGCCATGTCCCCCAATCGAAAGAGCTCAAAGATTTCGGCTTGCGATGGAA 659
|||||||||||||||||||||| ||||||||| |||| |||||||| | ||| |||||||
Sbjct 831 AGGTGTGAGGAGCCATGTCCCCAAATCGAAAGGGCTCGAAGATTTCCGTTTGAGATGGAA 890
Query 660 TAA-AAAGTTCGAA-AAGGAGAATCCAACGATGAGAGATGATCTAACCATTTTTGGATTA 717
|| ||| ||| || |||||||||||| | |||| |||||||| | |||||||||||||
Sbjct 891 -AAGAAATTTC-AAGAAGGAGAATCCATGGCTGAGGGATGATCTTAGCATTTTTGGATTA 948
Query 718 CGGGCGTATGATTCAACCACTGCATTGGCCATGGCCGTGGAGAAAACCAACATAAGAAGC 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 949 TGGGCGTATGATTCAACCACTGCATTGGCCATGGCCGTGGAGAAAACCAACATAAGCAGC 1008
Query 778 TTTCCGTATGATAATGCGAGTG-CGTCGTCAAATAACATGACAGATTTGGGGAAC-CTAG 835
||||||||| |||||||||||| | |||||||||||||||||||||||||||| | |||
Sbjct 1009 TTTCCGTATAATAATGCGAGTGGC-TCGTCAAATAACATGACAGATTTGGGGA-CGCTAC 1066
Query 836 GTGTCTCTCGCTACGGTCAAAGTCTTTTAAATGCTCTCTCGGAAATAAGATTCAATGGTT 895
||||||||||| |||| ||||||| || | |||||||||||||||||||||||||||
Sbjct 1067 ACGTCTCTCGCTATGGTCCAAGTCTTCTAGAGGCTCTCTCGGAAATAAGATTCAATGGTC 1126
Query 896 TGGCAGGAGAG-TTTAAACTCATAGACAAGCAGCTCGAGTCACCAAAGTTTGAGATCATA 954
|||||||| || ||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct 1127 TGGCAGGA-AGGTTTAATCTCATAGACAGGCAGCTCGAGTCACCAAAGTTTGAGATCATA 1185
Query 955 AATTTTGTAGGAAATGAAGAGAGGATTATCGGATTTTGGACACCGAGCAATGGACTTGTG 1014
|||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct 1186 AATTTTGTCGGAAATGAAGAGAGAATTGTCGGATTTTGGACACCGAGCAATGGACTTGTG 1245
Query 1015 AATGCAAATTCAAACAAAACAACTTCATTTACAGGGGAGAGGTTTGGTCCATTGATATGG 1074
|||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1246 AATGTAAATTCAAACAAAACAACGTCATTTACAGGGGAGAGGTTTGGGCCATTGATATGG 1305
Query 1075 CCAGGGAAGTCGACTATTGTTCCTAAAGGATGGGAGATACCAACTAATGGTAAGAAGATC 1134
||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1306 CCAGGGAAGTCTACTATTGTTCCTAAAGGATGGGAGATTCCAACTAATGGTAAGAAGATT 1365
Query 1135 AAAGTCGGTGTTCCTGTAAAGAAAGGCTTCTTCAATTTTGTGGAAGTAATCACAGATCCT 1194
||||| |||||||| |||||||||||||||||||| |||||||| |||||||| ||||||
Sbjct 1366 AAAGTGGGTGTTCCAGTAAAGAAAGGCTTCTTCAACTTTGTGGAGGTAATCACGGATCCT 1425
Query 1195 ATTACTAACATAACAACTCCAAAGGGTTACGCCATAGACATCTTTGAAGCTGCTCTTAAG 1254
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1426 ATCACTAACATAACAACTCCAAAGGGTTACGCCATAGACATCTTTGAAGCTGCTCTTAAG 1485
Query 1255 AAGTTGCCATATTCAGTCATTCCACAATACTACC 1288
||||| ||||||||||||||||||||||||||||
Sbjct 1486 AAGTTACCATATTCAGTCATTCCACAATACTACC 1519
Score = 758 bits (410), Expect = 0.0
Identities = 452/473 (96%), Gaps = 0/473 (0%)
Strand=Plus/Plus
Query 1291 ACTTTGGATGCAGTTGTTGGAGATGTAACTATCACAGCGTACAGGTCTTTGTATGCTGAC 1350
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 1576 ACTTTGGATGCAGTTGTTGGAGATGTAACCATCACAGCGTACAGATCTTTGTATGCTGAC 1635
Query 1351 TTCACGTTACCATACACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGACAATGAG 1410
|| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1636 TTTACCTTACCATACACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGACAACGAG 1695
Query 1411 AATAAGAACACATGGGTGTTCCTCAAACCTTGGACCTTAGAATTATGGGTCACCACTGGT 1470
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||| |
Sbjct 1696 AATAAGAACACATGGGTGTTCCTCAAACCTTGGGGCTTAGACTTATGGGTCACCACTGCT 1755
Query 1471 TGTTTCTTCGTCCTCATTGGTTTTGTTGTGTGGTTGTTCGAACATAGAGTCAACACAGAC 1530
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1756 TGTTTCTTCGTCCTCATTGGTTTTGTTGTGTGGTTGTTCGAACATAGAGTCAACACCGAC 1815
Query 1531 TTCCGTGGACCGCCTCACCACCAGATCGGCACTAGTTTTTGGTTCTCTTTCTCCACCATG 1590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1816 TTCCGTGGACCGCCTCACCACCAGATCGGCACTAGTTTTTGGTTCTCTTTCTCCACCATG 1875
Query 1591 GTTTTTGCCCACCGTGAGAAGGTAGTGAGCAATTTAGCAAGGTTTGTGGTGATTGTGTGG 1650
|||||||||||||||||||||||||||||||| |||||||||||||||||| |||| |||
Sbjct 1876 GTTTTTGCCCACCGTGAGAAGGTAGTGAGCAACTTAGCAAGGTTTGTGGTGGTTGTATGG 1935
Query 1651 TGCTTTGTGGTGCTTGTGCTCACTCAAAGCTACACAGCAAATCTCACCTCTTTCTTGACG 1710
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1936 TGCTTTGTGGTGCTTGTGCTCACTCAGAGCTACACAGCAAATCTCACCTCTTTCTTGACG 1995
Query 1711 GTACAGCGTTCTCAACCAGGGGCCACAACTATGAAAGATCTCATAAAAAATGG 1763
|| || |||| |||||||| ||||| || | ||||||||||||||||||||||
Sbjct 1996 GTGCAACGTTTTCAACCAGCGGCCATAAATGTGAAAGATCTCATAAAAAATGG 2048
Score = 477 bits (258), Expect = 2e-133
Identities = 306/329 (93%), Gaps = 3/329 (1%)
Strand=Plus/Plus
Query 1981 GGCTACCAACACGGGGCTTTTGTTAAAGATATTCTAAGAAATGAGGGATTTAATGATTCT 2040
||||| |||||||||||||||||||||||| |||||| ||| ||||||||||||| ||||
Sbjct 2059 GGCTATCAACACGGGGCTTTTGTTAAAGATTTTCTAATAAAAGAGGGATTTAATGTTTCT 2118
Query 2041 CAGCTCAAGCCTTTTGGTTCTTCCGAAGAATG-CGACGCACTTTTGTCCAATGGCAGTAT 2099
|||||||||||||||| |||||||||||||| | |||| |||||||||||||| |||||
Sbjct 2119 AAGCTCAAGCCTTTTGGGTCTTCCGAAGAATGTC-ACGCGCTTTTGTCCAATGGTAGTAT 2177
Query 2100 TTCAGTAGCTTTCGACGAAATTGCCTACCTTAAGGCTATCCTTTCTCAATACTGCTCCAA 2159
|||| ||||||||||||| |||| ||||||| |||||||||||||||||||||||||||
Sbjct 2178 ATCAGCAGCTTTCGACGAAGTTGCTTACCTTAGGGCTATCCTTTCTCAATACTGCTCCAA 2237
Query 2160 ATATGCCATGGTTGAACCTACATTTAAGACTGCTGGTTTTGGCTTTGCATTCCCCAAGAA 2219
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2238 ATATGCCATTGTTGAGCCTACATTTAAGACTGCTGGTTTTGGCTTTGCATTCCCCAGGAA 2297
Query 2220 TTCTCCTTTGACAGGAGATGTCTCAAGGGCTATCTTAAATGTGACTCAAGGAGATGAA-T 2278
||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 2298 TTCACCTTTGACAGGAGATGTCTCAAAGGCTATCTTAAATGTGACTCAAGGAGATGAAAT 2357
Query 2279 GCGACACATCGAGAACAAATGGTTCATGA 2307
|| ||||||||||||||||||||||||||
Sbjct 2358 GCAACACATCGAGAACAAATGGTTCATGA 2386
> AT2G29100.1 | Symbols: ATGLR2.9, GLR2.9 | glutamate receptor
2.9 | chr2:12501092-12504912 REVERSE LENGTH=2823
Length=2823
Score = 1197 bits (648), Expect = 0.0
Identities = 1049/1235 (85%), Gaps = 57/1235 (5%)
Strand=Plus/Plus
Query 61 GTGAGCGCCATCATCGGACCAAGAAACTCTATGCAAGCAGAGTTTATGATCAGACTCGCC 120
|||||||||||||||||||||| |||||||||||||||||| |||||||||| ||| |||
Sbjct 283 GTGAGCGCCATCATCGGACCAATAAACTCTATGCAAGCAGATTTTATGATCAAACTGGCC 342
Query 121 AACAAAACTCAAGTACCAACCATCACATTCTCTGCAACAAGTCCTCTTTTAACATCCATT 180
||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||
Sbjct 343 AACAAAACTCAAGTACCGACCATCACATTCTCTGCAACAAGCCCTCTTTTGACATCCATC 402
Query 181 AAAAGCGATTACTTCGTCCGAGCCACTATCGATGACTCATACCAGGTCAAAGCCATTGCA 240
|||||| |||||||||| ||||||||||||| ||||||| |||||||| ||||||||
Sbjct 403 AAAAGCCCTTACTTCGTCAGAGCCACTATCGACGACTCATCCCAGGTCAGGGCCATTGC- 461
Query 241 G-CCATTTTTGAA-TCCTTCGGATGGAGAAGTGTCGTCGCAATTTATGTGGACAACGAGT 298
| ||||||| || || || || |||||||| ||||||||||||||||||||||||||||
Sbjct 462 GTCCATTTTCAAATTCTTTAGG-TGGAGAAGGGTCGTCGCAATTTATGTGGACAACGAGT 520
Query 299 TAGGTGAAGGAATCATGCCTTACTTGTTTGACGCTTTACAAGACGTGCAAGTCGATAGAA 358
| ||||||||| ||||||||| ||||||||||||||||||||||||| ||||| | ||||
Sbjct 521 TTGGTGAAGGATTCATGCCTTTCTTGTTTGACGCTTTACAAGACGTGGAAGTCAAGAGAA 580
Query 359 GTGTGATCTCC-CCGGAGGCTAACGATGACCAGATTCTA-AAAGAACTTTATAAGCTCAT 416
|||||||| || |||||||||| |||||| |||||| | ||||||||| |||||||||
Sbjct 581 GTGTGATC-CCTCCGGAGGCTATCGATGATGAGATTC-AGAAAGAACTTCGTAAGCTCAT 638
Query 417 -GACGAGGC-AGACTAGGGT-TTTCGTTGTCCACATGGCCTCACGTCTTGCTTCACGGAT 473
|| ||||| || | || || ||| ||||||||||||| ||| |||| |||| |||| |
Sbjct 639 GGA-GAGGCAAG-CGAGAGTATTT-GTTGTCCACATGGAATCAAGTCTCGCTTTACGGGT 695
Query 474 TTTTGAGAAAGCTAAAGAGATCGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAA 533
|||| ||| ||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 696 TTTTCAGATAGCTAGGGATATCGGGATGATGGAGGAAGGGTATGTATGGTTAATGACCAA 755
Query 534 TGGAATGACGCATATGATGAGACATATCAACCATGGTCGTAGCTTAAATAATATAGAGGG 593
||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||
Sbjct 756 TGGAATGACGCATATGATGAGACATATAAACAATGGTCGTAGCTTAAATACTATAGAGGG 815
Query 594 CGTGTTAGGTGTGAGGAGCCATGTCCCCCAATCGAAAGAGCTCAAAGATTTCGGCTTGCG 653
|||||||||||||||||||||||||||| |||||||||||||| ||||||| | ||| |
Sbjct 816 CGTGTTAGGTGTGAGGAGCCATGTCCCCAAATCGAAAGAGCTCGGAGATTTCCGTTTGAG 875
Query 654 ATGGAATAA-AA-AGTTCGAAAAGGAGAATCCAACGATGAGAGATGATCTAACCATTTTT 711
|||||| || || | || || |||||||||||| |||||||||||||||||| | |||||
Sbjct 876 ATGGAA-AAGAACATTT-GAGAAGGAGAATCCATCGATGAGAGATGATCTAAACGTTTTT 933
Query 712 GGATTACGGGCGTATGATTCAACCACTGCATTGGCCATGGCCGTGGAGAAAACCAACATA 771
| |||| |||| |||||||||| ||||||||||| | ||| ||||||||| |||||| |
Sbjct 934 GCATTATGGGCATATGATTCAATTACTGCATTGGCTAAGGCTGTGGAGAAAGCCAACACA 993
Query 772 A-GAAGCTT-TCCGTATGATAATGCGAGTGCGTCGTCAAATAACATGACAGATTTGGGGA 829
| || |||| | ||||||||||| ||| | | |||||| || | ||||||||||||||
Sbjct 994 AAGA-GCTTATG-GTATGATAATGGGAGCACCTTGTCAAAAAATAGGACAGATTTGGGGA 1051
Query 830 ACCTAGGTGTCTCTCGCTACGGTCAAAGTCTTTTAAATGCTCTCTCGGAAATAAGATTCA 889
|| |||| ||||||| ||| |||| ||||||| ||| ||| ||||||| |||||||||
Sbjct 1052 ACGTAGGGGTCTCTCTCTATGGTCCAAGTCTTCAAAAGGCTTTCTCGGAGGTAAGATTCA 1111
Query 890 ATGGTTTGGCAGGAGAGTTTAAACTCATAGACAAGCAGCTCGAGTCACCAAAGTTTGAGA 949
|||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||
Sbjct 1112 ATGGTTTGGCAGGAGAGTTTAAACTCATAGACGGGCAGCTCCAGTCACCAAAGTTTGAGA 1171
Query 950 TCATAAATTTTGTAGGAAATGAAGAGAGGATTATCGGATTTTGGACACCGAGCA-ATGGA 1008
||||||||||||| |||||||||||||||||||| |||||||||||||| || | |||||
Sbjct 1172 TCATAAATTTTGTCGGAAATGAAGAGAGGATTATTGGATTTTGGACACCAAG-AGATGGA 1230
Query 1009 CTTGTGAATGCAA-A--TTCAAACAAAACAACTTCATTTACAGGGGAGAGGTTTGGTCCA 1065
|| || |||||| | ||||||||||| ||| | | |||| |||
Sbjct 1231 CTCATGGATGCAACAAGTTCAAACAAAAAAACGT--T-----GGGG-----------CCA 1272
Query 1066 TTGATATGGCCAGGGAAGTCGACTATTGTTCCTAAAGGATGGGAGATACCAACTAATGGT 1125
||||||||||||||||||| | |||||||| |||||||||||||| ||| ||
Sbjct 1273 GTGATATGGCCAGGGAAGTCAAAAATTGTTCCAAAAGGATGGGAGATTCCAG-----GG- 1326
Query 1126 AAGAAGATCAAAGTCGGTGTTCCTGTAAAGAAAGGCTTCTTCAATTTTGTGGAAG-TAAT 1184
|||||| | | ||| || ||||| | |||||||||||||| ||||||| ||| |||
Sbjct 1327 AAGAAGCTTAGAGTGGGCGTTCCAATGAAGAAAGGCTTCTTTGATTTTGTT-AAGGTAAC 1385
Query 1185 CACAGATCCTATTACTAACATAACA-ACTCCAAAGGGTTACGCCATAGACATCTTTGAAG 1243
|| | |||| || ||||||| || | || |||| ||||| |||||||| ||||||||||
Sbjct 1386 CATAAATCCGATCACTAACAAAA-AGACCCCAACCGGTTATGCCATAGAAATCTTTGAAG 1444
Query 1244 CTGCTCTTAAG-AAGTTGCCATATTCAGTCATTCC 1277
||||||||||| || |||||||||| |||||||||
Sbjct 1445 CTGCTCTTAAGGAA-TTGCCATATTTAGTCATTCC 1478
Score = 601 bits (325), Expect = 1e-170
Identities = 422/469 (90%), Gaps = 6/469 (1%)
Strand=Plus/Plus
Query 1296 GGATGCAGTTGTTGGAGATGTAACTATCACAGCGTACAGGTCTTTGTATGCTGACTTCAC 1355
||||||||||||||||||| |||| ||||||||| |||| |||||||| |||||||||||
Sbjct 1548 GGATGCAGTTGTTGGAGATATAACCATCACAGCGAACAGATCTTTGTACGCTGACTTCAC 1607
Query 1356 GTTACCATACACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGACAATGAGAATAA 1415
|||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1608 GTTACCGTTCACAGAGTCAGGAGTGTCTATGATGGTGCCGGTGAGAGATAATGAGAATAA 1667
Query 1416 GAACACATGGGTGTTCCTCAAACCTTGGACCTTAGAATTATGGGTCACCACTGGTTGTTT 1475
| ||||||||||||||||| ||||||||| |||||| ||||||||||||| ||||||||
Sbjct 1668 GGACACATGGGTGTTCCTCGAACCTTGGAGCTTAGAGCTATGGGTCACCACCGGTTGTTT 1727
Query 1476 CTTCGTCCTCATTGGTTTTGTTGTGTGGTTGTTCGAACATAGAGTCAACACAGACTTCCG 1535
||||||| |||||||||||||||||||| | |||||||| ||||||||||| ||||||||
Sbjct 1728 CTTCGTCTTCATTGGTTTTGTTGTGTGGCTATTCGAACACAGAGTCAACACCGACTTCCG 1787
Query 1536 TGGACCGCCTCACCACCAGATCGGCACTAGTTTTTGGTTCTCTTTCTCCACCATGGTTTT 1595
|||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1788 TGGACCGCCTCAGTACCAGATCGGCACTAGTTTATGGTTCTCCTTCTCCACCATGGTTTT 1847
Query 1596 TGCCCACCGTGAGAAGGTAGTGAGCAATTTAGCAAGGTTTGTGGTGATTGTGTGGTGCTT 1655
||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||| ||
Sbjct 1848 TGCCCACCGTGAGAATGTAGTGAGCAATTTAGCAAGGTTTGTGGTGGTTGTCTGGTGTTT 1907
Query 1656 TGTGGTGCTTGTGCTCACTCAAAGCTACACAGCAAATCTCACCTCTTTCTTGACGGTACA 1715
||| |||||||| |||||||| ||||||||||| | ||||||||||||| | ||||||||
Sbjct 1908 TGTAGTGCTTGTTCTCACTCAGAGCTACACAGCGAGTCTCACCTCTTTCCTCACGGTACA 1967
Query 1716 GCGTTCT-CAACC-AGGGGCCACAACTATGAAA-GATCTCATAAAAAAT 1761
||| | ||||| | || | |||| | | ||| |||||||| ||||||
Sbjct 1968 AAGTT-TGCAACCGACGGTC-ACAAATGT-AAACGATCTCATCAAAAAT 2013
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 114507443145
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5