BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481905
Length=3374
Score E
Sequences producing significant alignments: (Bits) Value
AT2G29970.1 | Symbols: | Double Clp-N motif-containing P-loop ... 4835 0.0
AT1G07200.2 | Symbols: | Double Clp-N motif-containing P-loop ... 230 9e-59
AT1G31640.1 | Symbols: AGL92 | AGAMOUS-like 92 | chr1:11322692-... 52.8 2e-05
> AT2G29970.1 | Symbols: | Double Clp-N motif-containing P-loop
nucleoside triphosphate hydrolases superfamily protein | chr2:12776386-12779938
FORWARD LENGTH=3378
Length=3378
Score = 4835 bits (2618), Expect = 0.0
Identities = 3146/3391 (93%), Gaps = 75/3391 (2%)
Strand=Plus/Plus
Query 1 atataacataaaaactatatattataaa-taaatatatttctttttcataaaaGCGACTA 59
||| |||||||||||||||||||||||| |||| | | ||||||||||||||||||||||
Sbjct 1 ATAAAACATAAAAACTATATATTATAAATTAAAAACACTTCTTTTTCATAAAAGCGACTA 60
Query 60 CACGGTTTTCATTTCTTTGTCGTAAAAATCTCATTTCCAGCttt---tgttt-a----ta 111
|||||||||||||||||||||||||||||| ||||||||||||| ||| | |
Sbjct 61 CACGGTTTTCATTTCTTTGTCGTAAAAATCCCATTTCCAGCTTTAAAAATTTCACGCTTT 120
Query 112 g--tttcttgat--tttc---t-tg--ttttattggtt-g-g-tgtggtttggtttagtt 158
| ||| || || |||| | || |||||||| || | | |||||||||||||| ||
Sbjct 121 GTTTTTGTTTATAGTTTCTTGTATGAATTTTATTGATTGGTGTTGTGGTTTGGTTTACTT 180
Query 159 ttaatttcgaa--tttt-cCACTAAACCGGCGACGATGCCGACACCGGTAACCACAGCGA 215
||||||||||| |||| |||||||||||||||||||||||||| |||||||| ||||
Sbjct 181 TTAATTTCGAATTTTTTATAACTAAACCGGCGACGATGCCGACACCAGTAACCACGGCGA 240
Query 216 GACAATGTTTAACGGAAGAAACAGCACGTGCATTAGACGACGCAGTCTCCGTCGCGCGTC 275
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 241 GACAATGTTTAACGGAAGAAACAGCGCGTGCATTAGACGACGCAGTCTCCGTCGCGCGTC 300
Query 276 GACGAAGCCACGCACAAACGACGTCACTTCACGCCGTTTCAGGTCTTTTAACGATGCCTT 335
| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 301 GTCGAAGCCACGCACAAACGACGTCACTTCACGCCGTTTCAGGTCTTTTAACAATGCCTT 360
Query 336 CCTCAATTCTCCGAGAAGTGTGTATCTCACGCGCCGCTCATAACACACCGTACTCTTCAT 395
| || |||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct 361 CATCGATTCTCCGAGAAGTGTGTATCTCACGCGCCGCCCACAACACACCGTACTCTTCAC 420
Query 396 GTCTCCAATTTCGCGCGCTTGAGCTCTGCGTCGGCGTTTCTCTAGACAGATTACCTTCTT 455
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 GTCTCCAGTTTCGCGCGCTTGAGCTCTGCGTCGGCGTTTCTCTAGACAGATTACCTTCTT 480
Query 456 CGAAATCACCACCACCACCAACAACAACAACAACGACGGTGGAAGAAGATCCTCCGGTGT 515
|||||| |||| || |||| |||||||||||||||||||||||||| |
Sbjct 481 CGAAAT------------CAAC-AC--CAACGACGACGGTGGAAGAAGATCCTCCGGTCT 525
Query 516 CAAACTCACTCATGGCGGCGATCAAAAGATCTCAAGCCACTCAACGACGTCATCCAGAGA 575
||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 526 CAAACTCTCTCATGGCGGCGATCAAAAGATCTCAAGCGACTCAACGACGTCATCCAGAGA 585
Query 576 CTTATCATCTTCATCAAATCCATGGAAACAACAACAACACTCAAACGACGTCGGTTTTGA 635
||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||
Sbjct 586 CTTATCATCTTCATCAAATCCATGG--A-AACAACAACACGGAAACGACGTCGGTTTTGA 642
Query 636 AAGTTGAGTTAAAGTATTTTATACTATCCATTTTAGATGACCCGATTGTGAGTCGGGTTT 695
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 643 AAGTTGAGTTGAAGTATTTTATACTATCCATTTTAGATGACCCGATTGTGAGTCGGGTCT 702
Query 696 TTGGTGAAGCCGGGTTTAGAAGCACCGACATTAAACTCGACGTGCTTCATCCTCCGGTGA 755
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 703 TTGGTGAAGCCGGGTTTAGAAGCACCGACATTAAACTCGACGTGCTTCATCCTCCGGTGA 762
Query 756 CGTCTCAGTTCTCTTCACGGTTTTCTTCAAGATCTCGTATTCCTCCTCTGTTTTTATGTA 815
||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 763 CGTCTCAATTCTCTTCACGGTTCACGTCAAGATCTCGTATTCCTCCTCTGTTTTTATGTA 822
Query 816 ACCTACCGGAATCTGATC-CGGGTCGGGTTAGATTCGGGTTTCCGTTGGGTGATCTCGAC 874
|| ||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||
Sbjct 823 ACTTACCGGAATCTGA-CTCGGGTCGGGTTAGATTCGGGTTTCCGTTTGGTGATCTCGAC 881
Query 875 GAGAACTGTAGAAGAATCGGAGAAGTTTTAG-GAAGGAAAGATAAGAAGAATCCATTACT 933
|||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||
Sbjct 882 GAGAACTGTAGAAGAATCGGTGAAGTTTTAGCG-AGGAAAGATAAGAAGAATCCATTACT 940
Query 934 AGTTGGTGTTTGTGGTGGTGAAGCTCTTAAAACGTTTACTGATTCTATAAACAGAGGAAA 993
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 941 AGTTGGTGTTTGTGGTGTTGAAGCTCTTAAAACGTTTACTGATTCTATAAACAGAGGAAA 1000
Query 994 GTTTGGTTTTTTACCTCTGGAGATTAGTGGGTTAAGTGTAGTTAGTATAGAGATTAGTGA 1053
|||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1001 GTTTGGTTTTTTACCTTTGGAGATTAGTGGGTTAAGTGTAGTTAGTATAAAGATTAGTGA 1060
Query 1054 TGTTTTAGTTGATGGATCAAGAATCGATATAAAGTTTGATGATTTAGGAAGATTGAAGTC 1113
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 1061 AGTTTTAGTTGATGGATCAAGAATAGATATAAAGTTTGATGATTTAGGGAGATTGAAGTC 1120
Query 1114 AGGGATGGTTTTGAATCTTGGAGAGTTAAAGGTTTTAGCTAGTGATGTTTTCTCTGTTAG 1173
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1121 AGGGATGGTTTTGAACCTTGGAGAGTTAAAGGTTTTAGCTAGTGATGTTTTCTCTGTT-G 1179
Query 1174 -TGTGGTTGAGAAGTTTGTGTTGAAGCTCTCTGATTTGTTGAAGCTTCACAGTGAGAAGC 1232
|||| ||||||||||||||||||||||| |||||||||||||||||||| ||||||| |
Sbjct 1180 ATGTGATTGAGAAGTTTGTGTTGAAGCTCGCTGATTTGTTGAAGCTTCACCGTGAGAAAC 1239
Query 1233 TTTGGTTTATTGGAAGTGTTTCGAGTAATGAGACGTATTTGAAGCTGATTGAGAAGTTTC 1292
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1240 TTTGGTTTATTGGAAGTGTTTCGAGTAATGAGACGTATTTGAAGCTGATTGAGAGGTTTC 1299
Query 1293 CGATGATTGATAAAGATTGGAATCTTCATCTTCTTCCTATTACATCTTCAAGTCAAGGGG 1352
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1300 CAACGATTGATAAAGATTGGAATCTTCATCTTCTTCCTATTACATCTTCAAGTCAAGGGC 1359
Query 1353 TTTATCCAAAATCTAGTTTGATGGGATCTTTTGTTCCATTTGGAGGGTTTTTCTCATCAA 1412
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1360 TTTATCCAAAATCTAGTTTGATGGGATCTTTTGTTCCATTTGGAGGGTTTTTCTCATCCA 1419
Query 1413 CATCGGATTTTAGAGTACCGTTTAGTAACTCGATGAATCAGAGTTTGCCTCGGTGTCATC 1472
|||||||||||||| |||||| ||||| |||||||||||||| ||| |||||||||||||
Sbjct 1420 CATCGGATTTTAGAATACCGTCTAGTAGCTCGATGAATCAGACTTTACCTCGGTGTCATC 1479
Query 1473 TTTGTAATGAGAAGTATGAGCAAGAAGTCACCGCCTTTGCTAAGTCCGGGTCGAGT-CTC 1531
||||||| |||||||||||||||||||||||||||||||||||||| ||||||| | ||
Sbjct 1480 TTTGTAACGAGAAGTATGAGCAAGAAGTCACCGCCTTTGCTAAGTCGGGGTCGA-TGATC 1538
Query 1532 GATGATCAGTGTTCAGAGAAGTTACCTTCTTGGTTACGAAATGTGGAGCATGAACAAGAC 1591
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1539 GATGATCAGTGTTCGGAGAAGTTACCTTCTTGGTTACGAAATGTGGAGCATGAACACGAG 1598
Query 1592 AAAGGAAGTCTCGGAAAGGCTAAAGATGATCCAAACGTATTAGCCTCTCGGATTCCCGCT 1651
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1599 AAAGGAAATCTCGGAAAGGTTAAAGATGATCCAAACGTATTAGCCTCTCGGATTCCCGCT 1658
Query 1652 CTGCAGAAGAAATGGGACGACATTTGTCAAAGAATCCATCAAACTCCGGCTTTTCCTAAA 1711
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1659 CTGCAGAAGAAATGGGACGACATTTGTCAAAGAATCCATCAAACTCCGGCGTTTCCTAAA 1718
Query 1712 ATCAGTTTTCAGCCTGTTAGACCGCAGTTCCCGCTTCAGCT-GGTTTCTTCTAGCCAGTC 1770
||||||||||||| |||||||||||||||||||||||||| |||| ||||||||||| |
Sbjct 1719 CTCAGTTTTCAGCCCGTTAGACCGCAGTTCCCGCTTCAGCTTGGTT-CTTCTAGCCAGAC 1777
Query 1771 CAAGATGAGTCTCGGAAGCCCAACTGAGCAAAGTGTTCGCAGCATTAGGACGTCTGAAAG 1830
|||||||||||| ||||||||||||||| ||| |||| ||| | | ||||||||||||||
Sbjct 1778 CAAGATGAGTCTTGGAAGCCCAACTGAGAAAATTGTTTGCA-C-T-AGGACGTCTGAAAG 1834
Query 1831 CTTTCAGGGGACGG---CTCAAGTGCAGAATCCACCACACCAACCCGGTTTATCAGTTAA 1887
|||||| |||| || ||| | ||||||||| ||||||||||| ||||||||||| ||
Sbjct 1835 CTTTCAAGGGATGGTGGCTCTACCGCAGAATCCGCCACACCAACCTGGTTTATCAGTCAA 1894
Query 1888 GATCTCAAAACCAAAACAGACAGAGGATCTCACAAGTCGCA-CAACGAACTCGCCTTTGA 1946
|||||||| |||||||| || ||||||||| ||||| || ||||||||||||||||||
Sbjct 1895 AATCTCAAAGCCAAAACATACTGAGGATCTCTCAAGTT-CAACAACGAACTCGCCTTTGA 1953
Query 1947 GCTGTGTTACAACAGATTTAGGATTGGGAACAATCTATGCATCGAAAAACCAGGATTCAA 2006
||| |||||||||||||||||| |||||||||||||| |||||||| ||||| || |||
Sbjct 1954 GCTTTGTTACAACAGATTTAGGGTTGGGAACAATCTACGCATCGAAGAACCAAGAACCAA 2013
Query 2007 ACACACCTGTATC-GCTCAAAAGGAGAGACTTTGAGGTGATCAAAGAAAAACAATCGTTG 2065
|||||| ||||| | | ||| ||||||||||||||||||||||||| ||||||| ||||
Sbjct 2014 GCACACCAGTATCAGTTGAAA-GGAGAGACTTTGAGGTGATCAAAGAGAAACAATTGTTG 2072
Query 2066 GTG-GCTTCAAGATACTGCAAAGATTTCAAGTCTCTCAGGGAATTACTCTCTCGAAAAGT 2124
| ||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2073 -TCAGCTTCGAGATACTGCAAAGATTTCAAGTCTCTCAGGGAACTACTCTCTCGAAAAGT 2131
Query 2125 CGGTTTTCAGAATGAAGCTGTGAATGCCATTAGCGAAATCGTTTGTGGATACAGAGATGA 2184
|||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 2132 CGGTTTTCAGAACGAAGCTGTGAATGCGATTAGCGAAATTGTTTGTGGATACAGAGATGA 2191
Query 2185 GTCCAGGAGAAGAAACCAC-A--TAGCAACCACAAGTAATGTTTGGCTTGCTCTTCTTGG 2241
|||||||||||||||| || | |||||||||||||||||||||||||||||||||||||
Sbjct 2192 GTCCAGGAGAAGAAACAACCACGTAGCAACCACAAGTAATGTTTGGCTTGCTCTTCTTGG 2251
Query 2242 ACCTGATAAAGCCGGGAAGAAGAAAGTAGCATCAGCTCTTGCCGAAGTCTTCTGCGGGGG 2301
|||||||||||||||||||||||||||||||| ||||||||| ||||||||||| || ||
Sbjct 2252 ACCTGATAAAGCCGGGAAGAAGAAAGTAGCATTAGCTCTTGCTGAAGTCTTCTGTGGTGG 2311
Query 2302 CCAAGACAACTTCATCTGTGTGGATTTCAAGTCACAGGACAGTCTTGACGATAGATTCAG 2361
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2312 ACAAGACAACTTCATCTGTGTGGATTTCAAGTCACAAGACAGTCTTGACGATAGATTCAG 2371
Query 2362 AGGAAAAACAGTTGTTGATTACATTGCTAACGAAGTGGCGAGGCGGGCGGATTCTGTTGT 2421
||| |||||||||||||||||||||||| |||||||||||| || ||||||||||||||
Sbjct 2372 AGGGAAAACAGTTGTTGATTACATTGCTGGCGAAGTGGCGAGACGTGCGGATTCTGTTGT 2431
Query 2422 TTTCATCGAAAACGTGGAAAAAGCTGAGTTCCCTGATCAAATCAGATTGTCTGATGCTAT 2481
||||||||||||||||||||| || |||||||||||||| |||||||||||||| |||||
Sbjct 2432 TTTCATCGAAAACGTGGAAAAGGCCGAGTTCCCTGATCAGATCAGATTGTCTGAGGCTAT 2491
Query 2482 TAGAACTGGAAAACTCCGGGACTCGCATGGGAGAGAGATCAGTATGAAAAATGTTATAGT 2541
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2492 GAGAACTGGAAAACTCCGTGACTCGCATGGGAGAGAGATCAGTATGAAAAATGTTATAGT 2551
Query 2542 TGTTGCTACTATTTCTGGAAGTGATAAAGACAGTGATTGTCATGTTCTTGAAGAACCGGT 2601
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct 2552 TGTTGCTACTATTTCTGGAAGTGATAAAGCCAGTGATTGTCATGTTCTTGAAGAACCAGT 2611
Query 2602 CAAATATTCAGAGGAAAGAGTTCTCAGTGCCAAAAACTGGAAACTTCAGATAAGACTAGC 2661
|||||| || |||||||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct 2612 CAAATACTCCGAGGAAAGAGTTCTCAATGCCAAAAACTGGACACTTCAGATAAAACTAGC 2671
Query 2662 CA-ACACTTCAAATGTTAACAAGAATGGTCCGAATAAGAGAAGACAAGAGGAGGCAGAAA 2720
| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||
Sbjct 2672 -AGACACTTCAAATGTTAACAAGAATGGTCCCAATAAGAGAAGACAGGAGGAGGCAGAAA 2730
Query 2721 CAGAGGTGACAGAGCTTCGAGCCCTTAAGTCTCAACGTTCGTTTCTTGATCTGAATCTTC 2780
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||
Sbjct 2731 CAGAGGTGACAGAGCTTCGAGCCCTTAAGTCTCAGCGTTCGTTTCTTGATCTAAATCTTC 2790
Query 2781 CTGTGGATGAGATAGAAGCAAACGAAGACGAAGCGTATACAATGTCCGAGAACACGGAAG 2840
||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 2791 CTGTGGATGAGATTGAAGCAAACGAAGACGAAGCGTATACAATGTCGGAGAACACAGAAG 2850
Query 2841 CTTGGCTTGAGGATTTTGTGGAACAAGTAGACGGGAAAGTGACTTTCAAGCTTATTGACT 2900
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 2851 CTTGGCTTGAGGATTTTGTGGAACAAGTAGATGGGAAAGTGACGTTCAAGCTTATTGACT 2910
Query 2901 TTGATGAGTTAGCTAAGAACGTAAAAAGGAACATCCTTTCGCTATTTCATCGGTCTTTTG 2960
||||||||||||| || ||| |||||||||| || |||||||||||||||| ||||||||
Sbjct 2911 TTGATGAGTTAGCAAAAAACATAAAAAGGAATATTCTTTCGCTATTTCATCTGTCTTTTG 2970
Query 2961 GACCTGAAACACATCTAGAGATCGAAAACGATGCGATCCTTAAGATTCTTGGTGCCTTAA 3020
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||
Sbjct 2971 GACCTGAAACACATCTAGAGATCGAAAACGATGTGATCCTTAAGATTCTTGCTGCTTTAA 3030
Query 3021 GATGGTCATCAGATGAAGAGAAAACATTTGATCAATGGCTGCAAAATGTTCTTGCTCCAA 3080
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct 3031 GATGGTCATCAGATGAAGAGAAAACATTTGATCAGTGGCTGCAAACTGTTCTTGCTCCAA 3090
Query 3081 GCTTTACTAAAGCGAGACAAAAGTATGTTCCCGCTACTCCTTTTGCTGTGAAACTTGTTG 3140
||||| |||||||||||||||||| |||||||||| |||||||| |||||||||||||||
Sbjct 3091 GCTTTGCTAAAGCGAGACAAAAGTGTGTTCCCGCTGCTCCTTTTTCTGTGAAACTTGTTG 3150
Query 3141 CCTCTAGAGATTCTTCGGCTGAAGAGGAAACTACCGGAATACAACAGTTTCCGGCGAGAG 3200
|||||||||| ||| ||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct 3151 CCTCTAGAGAGTCTCCGGCTGAAGAGGAGACTACAGGGATACAACAGTTTCCGGCGAGAG 3210
Query 3201 TCGAAGTGATCTGATTATTTGT-GATTGTAATTTCATGTATAAGTGATGATAGTTATATA 3259
||||||||||||||||||| || | ||||||||| |||||||||||||||||||||||||
Sbjct 3211 TCGAAGTGATCTGATTATT-GTTG-TTGTAATTTTATGTATAAGTGATGATAGTTATATA 3268
Query 3260 GATTTTCCCAGAGTTTTGTAATCGGCTTGGTTTGAGTTTGTGCTTTGTCACTAAATGTAT 3319
|||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3269 GATTATCCCAGAGTTTTGTAATCGGCTTGGTTTGAGTTTGTTCTTTGTCACTAAATGTAT 3328
Query 3320 AT-T-ATATAGGCTTAAAGCTGAGTTATTAA 3348
|| | |||||| | |||||||||| ||||||
Sbjct 3329 ATATTATATAGTCATAAAGCTGAGCTATTAA 3359
> AT1G07200.2 | Symbols: | Double Clp-N motif-containing P-loop
nucleoside triphosphate hydrolases superfamily protein | chr1:2208719-2212546
REVERSE LENGTH=3484
Length=3484
Score = 230 bits (124), Expect = 9e-59
Identities = 363/475 (76%), Gaps = 30/475 (6%)
Strand=Plus/Plus
Query 2084 AAAGATTTCAAGTCTCTCAGGGAATTACTCTCTCGAAAAGTCGGTTTTCAGAATGAAGCT 2143
|||||||||||||||||||| ||| |||||||||| ||||| | | |||| ||||||
Sbjct 2076 AAAGATTTCAAGTCTCTCAGAGAAATACTCTCTCGTAAAGTTGCCTGGCAGACCGAAGCT 2135
Query 2144 GTGAATGCCATTAGCGAAATCGTTTGTGGATACAGAGA-TGAGTCCAGGAGAAGAAACCA 2202
|| |||||||| ||| |||| | || |||| || | | || |||| | ||||||| |
Sbjct 2136 GTAAATGCCATAAGCCAAATTATCTGCGGATGCA-AAACCGACTCCACGCGAAGAAA-C- 2192
Query 2203 CATAGCAACCACAAGTAATGTTTGGCTTGCTCTTCTTGGACCTGATAAAGCCGGGAAGAA 2262
|| ||||| | | || ||||||| |||||||||||||| ||||||| ||||||||
Sbjct 2193 CA-AGCAA--GC--GGAA--TTTGGCTGGCTCTTCTTGGACCCGATAAAGTGGGGAAGAA 2245
Query 2263 GAAAGTAGC-ATCAGCTCTTGCCGAAGTCTTCTGCGGGGGCCAAGACAACTT-CATCTGT 2320
|||||| || || | ||||| | |||||||||| || || ||| ||| || ||| |||
Sbjct 2246 GAAAGTGGCGATGA-CTCTTTCTGAAGTCTTCTTTGGTGGTAAAGTCAA-TTACATATGT 2303
Query 2321 GTGGATTTCAAGTCACAGGACAG-T--CTTGACGATAGATTCAGAGGAAAAACAGTTGTT 2377
|| ||||| | || || | | | ||||| || | ||||||||| |||||||| ||
Sbjct 2304 GTAGATTTTGGGGCAGAGCATTGTTCCCTTGATGACAAATTCAGAGGCAAAACAGTGGTG 2363
Query 2378 GATTACATTGCTAA-C-G-AAG-TGGCGAGGCGGGCGGATTCTGTTGTTTTCA-TCGAAA 2432
|||||| | ||| | | || | | ||| | | ||||||||||| | ||||||
Sbjct 2364 GATTAC---G-TAACCGGTGAGTTATCTAGGAAACCACACTCTGTTGTTTT-ACTCGAAA 2418
Query 2433 ACGTGGAAAAAGCTGAGTTCCCTGATCAAATCAGATTGTCTGATGCTATTAGAACTGG-A 2491
|||||||||||||||||||||| ||||| || ||||||||||| ||| | || || || |
Sbjct 2419 ACGTGGAAAAAGCTGAGTTCCCGGATCAGATGAGATTGTCTGAAGCTGTGAGTACGGGGA 2478
Query 2492 AAACTCCGGGACTCGCATGGGAGAGAGATCAGTATGAAAAATGTTATAGTTGTTG 2546
||| |||| || | |||||| |||| ||| |||||||||||||| || |||||||
Sbjct 2479 AAA-TCCGTGATTTGCATGGAAGAGTGATTAGTATGAAAAATGTGATTGTTGTTG 2532
> AT1G31640.1 | Symbols: AGL92 | AGAMOUS-like 92 | chr1:11322692-11324176
REVERSE LENGTH=1395
Length=1395
Score = 52.8 bits (28), Expect = 2e-05
Identities = 28/28 (100%), Gaps = 0/28 (0%)
Strand=Plus/Plus
Query 462 CACCACCACCACCAACAACAACAACAAC 489
||||||||||||||||||||||||||||
Sbjct 1356 CACCACCACCACCAACAACAACAACAAC 1383
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 167908758221
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5