BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481921
Length=3632
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30110.1 | Symbols: ATUBA1, MOS5, UBA1 | ubiquitin-activatin... 5782 0.0
AT5G06460.1 | Symbols: ATUBA2, UBA 2 | ubiquitin activating enz... 2036 0.0
> AT2G30110.1 | Symbols: ATUBA1, MOS5, UBA1 | ubiquitin-activating
enzyme 1 | chr2:12852372-12857617 REVERSE LENGTH=3626
Length=3626
Score = 5782 bits (3131), Expect = 0.0
Identities = 3478/3640 (96%), Gaps = 45/3640 (1%)
Strand=Plus/Plus
Query 1 GAGATTTTTGCAAAATTCGTCACTTCAATTTCAATTTTCAGATCTCAAACtttttttCTC 60
||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 8 GAGATTTCTGCAAAATTCGTCACTTCAATTTCAATTTTCAGATCTCAAAAACTTTTTCTC 67
Query 61 TTTTCCGATTCCAATCTTCTCTCGTCTGCTTTCCTCAAAGGTTTTTTCATCACTTTATGC 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 68 TTTTCCGATTCCAATCTTCTCTCGTCTGCTTTCCTCAAAGGTTTTTTCATCACTTTATGC 127
Query 121 TTCACAAGCGAGCTAGTGAAGCTAACGATAAGAACGATAATAGCATCATCGGTTCCGATT 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 128 TTCACAAGCGAGCTAGTGAAGCTAACGATAAGAACGATAATACCATCATCGGTTCCGATT 187
Query 181 TAGCATCATCTAAGAAACGCCGTATCGATATCACTGATTCTTCTTCGTCTGATAA-TAAG 239
||||||||||||||||||||||||||||| ||||||| |||||||||||||| |
Sbjct 188 TAGCATCATCTAAGAAACGCCGTATCGATTTCACTGA---ATCTTCGTCTGATAAGT-CT 243
Query 240 TCTTCGATTGTT-GCTTCTGGTAGTAGTAGTAGTAGCGGATTTCACGGCGATAGCGTCGC 298
||||||||| || |||||| | ||||||| || | || |||||||||||||||||||
Sbjct 244 TCTTCGATT-TTAGCTTCT-G--GTAGTAGCAG--G-GGTTTTCACGGCGATAGCGTCGT 296
Query 299 TCACCAAATCGACATGGCTTTTGGTAATTCGAACCGTCAGGAGATTGATGAAGATCTGCA 358
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 TCAGCAAATCGACATGGCTTTTGGTAATTCGAACCGTCAGGAGATTGATGAAGATCTGCA 356
Query 359 TAGTCGGCAGCTCGCCGTCTATGGTCGTGAGACTATGAGGCGTCTCTTTGCTTCGAATGT 418
||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 357 CAGTCGCCAGCTCGCCGTCTATGGTCGTGAGACTATGAGGCGTCTCTTTGCTTCCAATGT 416
Query 419 TCTCATCTCGGGGATGCACGGGCTTGGTGCCGAGATTGCCAAGAATCTTATTCTTGCTGG 478
||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct 417 TCTCATCTCGGGGATGCACGGTCTTGGTGCCGAGATTGCCAAGAATCTTATACTTGCTGG 476
Query 479 TGTGAAGTCTGTGACCTTGCATGATGAAAGAGTTGTAGAGCTATGGGACTTATCTAGCAA 538
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 477 TGTGAAGTCTGTGACCTTGCATGATGAAAGAGTTGTAGAGCTATGGGACTTATCAAGCAA 536
Query 539 CTTTGTTTTCTCGGAGGATGATGTTGGCAAGAATAGAGCGGATGCTTCTGTTCAGAAGTT 598
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 537 CTTTGTTTTCTCGGAGGATGATGTTGGCAAGAATAGAGCAGATGCTTCTGTTCAGAAGTT 596
Query 599 ACAGGATCTTAACAATGCTGTGGTTGTCTCTAGCTTGACCAAAAGCTT-AACTAAAGAGG 657
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 597 ACAGGATCTTAACAATGCTGTGGTTGTCTCTAGCTTGACCAAAAGCTTAAAC-AAAGAGG 655
Query 658 ATCTTTCTGGTTTCCAGGTTGTTGTTTTCTCTGACATAAGCATGGAAAGAGCAATCGAAT 717
|||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 656 ATCTTTCTGGCTTCCAGGTTGTTGTATTCTCTGACATAAGCATGGAAAGAGCAATCGAAT 715
Query 718 TTGATGACTATTGTCACAGCCATCAGCCTCCTATCGCTTTTGTCAAAGCTGACGTCAGGG 777
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 716 TTGATGACTATTGTCACAGCCATCAGCCTCCTATCGCTTTTGTCAAGGCTGATGTCAGGG 775
Query 778 GTCTTTTCGGCTCTGTCTTTTGTGATTTTGGGCCTGAATTTGCGGTTCTTGATGTTGATG 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 GTCTTTTCGGCTCTGTCTTTTGTGATTTTGGGCCTGAATTTGCGGTTCTTGATGTTGATG 835
Query 838 GAGAGGAACCCCATACAGGCATCATTGCGTCTATCTCTAATGAGAACCAGGCATTTATTT 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 836 GAGAGGAACCCCATACAGGCATCATTGCGTCTATCTCTAATGAGAACCAGGCATTTATTT 895
Query 898 CCTGTGTCGACGATGAGAGGCTTGAATTTGAAGATGGTGACCTAGTTGTTTTCTCAGAAG 957
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 896 CCTGTGTCGACGATGAGAGGCTTGAGTTTGAAGATGGTGACCTAGTTGTTTTCTCAGAAG 955
Query 958 TTGAGGGCATGACAGAATTGAATGATGGGAAACCAAGGAAGATAAAAAGTGCACGGCCAT 1017
||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 956 TTGAGGGTATGACAGAATTGAATGATGGGAAACCAAGGAAGATAAAAAGTACACGGCCAT 1015
Query 1018 ATTCATTCATTCTTGATGAGGACACTTCAAACTATGGAACATATGTGAAGGGTGGTATTG 1077
||||||||| ||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1016 ATTCATTCACCCTTGATGAGGACACTACTAACTATGGAACATATGTGAAGGGTGGTATTG 1075
Query 1078 TCACTCAAGTGAAACAGCCTAAGTTGCTGAATTTCAAGCCACTGAGGGAAGCACTTAAAG 1137
||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||||| |
Sbjct 1076 TCACTCAAGTGAAACAGCCAAAGTTACTGAATTTCAAGCCATTGAGGGAAGCGCTTAAGG 1135
Query 1138 ATCCAGGGGATTTTCTATTTAGTGATTTCTCTAAGTTTGACCGCCCTCCACTTCTTCACT 1197
|||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||
Sbjct 1136 ATCCAGGGGATTTTCTATTTAGTGATTTCTCTAAGTTTGATCGGCCTCCACTCCTTCACT 1195
Query 1198 TAGCATTCCAGGCACTTGATCATTTTAAAGCTGAAGCTGGCAGATTTCCTGTTGCTGGCT 1257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1196 TAGCATTCCAGGCACTTGATCATTTTAAAGCTGAAGCTGGCAGATTTCCTGTTGCTGGCT 1255
Query 1258 CAGAAGAGGACGCTCAGAAGCTTATATCGATTGCCACAGCCATCAATACCGGGCAGGGTG 1317
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1256 CAGAAGAGGACGCTCAGAAGCTTATATCGATTGCCACAGCCATCAATACCGGGCAGGGTG 1315
Query 1318 ATTTAAAGGTGGAGAATGTTGACCAGAAGCTTCTACGACACTTTTCCTTTGGAGCCAAGG 1377
|||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct 1316 ATTTAAAGGTGGAGAATGTTGATCAGAAGCTTCTAAGACACTTTTCCTTTGGAGCCAAGG 1375
Query 1378 CTGTCCTGAATCCCATGGCTGCAATGTTTGGCGGTATTGTTGGACAGGAGGTTGTTAAAG 1437
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1376 CTGTCCTGAATCCTATGGCTGCAATGTTTGGCGGTATTGTTGGACAGGAGGTTGTTAAAG 1435
Query 1438 CTTGCTCTGGAAAATTTCATCCTCTCTTCCAGTTTTTCTACTTTGATTCAGTGGAGTCAC 1497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1436 CTTGCTCTGGAAAATTTCATCCTCTCTTCCAGTTTTTCTACTTTGATTCAGTGGAGTCAC 1495
Query 1498 TACCCACTGAACCTCTGGACTCGAGTGACTTTGCACCAAGAAACAGCCGGTATGATGCCC 1557
| ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1496 TCCCCTCTGAACCTGTGGACTCGAGTGACTTTGCACCAAGAAACAGCCGGTATGATGCCC 1555
Query 1558 AAATATCTGTATTTGGGGCCAAGTTCCAGAAGAAACTTGAAGATGCTAAAGTTTTCACAG 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1556 AAATATCTGTATTTGGGGCCAAGTTCCAGAAGAAACTTGAAGATGCTAAAGTTTTCACAG 1615
Query 1618 TAGGGTCTGGTGCTCTTGGCTGTGAGTTCTTGAAAAATATGGCTCTGATGGGGGTTTCTT 1677
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1616 TAGGGTCTGGTGCTCTTGGCTGTGAGTTCTTGAAAAATTTGGCTCTGATGGGGGTTTCTT 1675
Query 1678 GTGGAAGCCAAGGGAAGCTGACAGTGACAGATGATGATATAATCGAGAAGAGTAACCTCA 1737
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 1676 GTGGAAGCCAAGGGAAGCTGACAGTGACAGATGATGATATCATTGAGAAGAGTAACCTCA 1735
Query 1738 GTCGTCAATTTCTGTTCCGTGACTGGAACATCGGACAGGCTAAATCCACAGTTGCTGCTT 1797
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1736 GTCGTCAATTTCTGTTCCGTGACTGGAACATTGGACAGGCTAAATCCACAGTTGCTGCTT 1795
Query 1798 CGGCTGCTGCTGCTATAAATCCCCGCTTCAACATTGAGGCCCTGCAAAACCGTGTTGGCG 1857
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1796 CGGCTGCTGCTGTTATAAATCCTCGCTTCAACATTGAGGCCCTGCAAAACCGTGTTGGCG 1855
Query 1858 CTGAGACTGAGAATGTATTTGACGATGCCTTCTGGGAGAACTTAACTGTTGTCGTCAATG 1917
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1856 CGGAGACTGAGAATGTATTTGACGATGCCTTCTGGGAGAACTTAACTGTTGTCGTCAATG 1915
Query 1918 CACTGGATAATGTCAATGCGAGGCTCTATGTTGATTCGAGGTGCTTGTATTTCCAGAAGC 1977
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 CACTGGATAATGTTAATGCGAGGCTCTATGTTGATTCGAGGTGCTTGTATTTCCAGAAGC 1975
Query 1978 CTCTCCTTGAGTCTGGAACTCTTGGTGCAAAGTGCAACACACAGAT-GGTTATCCCACAT 2036
|||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||
Sbjct 1976 CTCTCCTTGAGTCTGGAACTCTTGGTACAAAGTGCAACACACAG-TCGGTTATCCCACAT 2034
Query 2037 CTAACTGAAAATTACGGTGCCTCAAGGGACCCACCAGAGAAACAAGCCCCCATGTGTACA 2096
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2035 CTAACTGAAAATTACGGTGCCTCAAGGGACCCACCAGAGAAACAGGCCCCCATGTGTACA 2094
Query 2097 GTGCATTCGTTTCCGCATAACATTGATCACTGTTTAACTTGGGCTCGCTCTGAGTTTGAG 2156
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2095 GTGCATTCCTTCCCGCATAACATTGATCACTGTTTAACTTGGGCTCGCTCTGAGTTTGAG 2154
Query 2157 GGTCTGCTGGAGAAGACTCCTGCTGAAGTGAATGCATATCTCTCTAGCCCAGTTGAGTAC 2216
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 2155 GGTCTGCTGGAGAAGACTCCCGCTGAAGTGAATGCATATCTTTCTAGCCCAGTTGAGTAC 2214
Query 2217 ACTAACTCAATGATGAGTGCTGGTGATGCTCAGGCGAGGGAGACATTGGAGAGGATTCTT 2276
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct 2215 ACTAACTCAATGATGAGTGCTGGTGATGCTCAGGCGAGGGACACATTGGAGAGGATTGTT 2274
Query 2277 GAGTGCCTTGACAAGGAGAAGTGTGAGACCTTCCAAGACTGCTTAACCTGGGCTCGACTG 2336
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2275 GAGTGCCTTGAAAAGGAGAAGTGTGAGACCTTCCAAGACTGCTTAACCTGGGCACGACTG 2334
Query 2337 AGGTTTGAGGATTACTTTGTGAACCGTGTCAAGCAATTGATATACACATTTCCTGAAGAT 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2335 AGGTTTGAGGATTACTTTGTGAACCGTGTCAAGCAATTGATATACACATTTCCTGAAGAT 2394
Query 2397 GCTGCGACTAGTACCGGATCTCCATTCTGGTCTGCTCCGAAAAGATTCCCTCGTCCACTC 2456
|||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||
Sbjct 2395 GCTGCGACTAGTACCGGAGCTCCATTCTGGTCTGCTCCAAAAAGATTCCCTCGTCCACTC 2454
Query 2457 CAGTACTCGTCTTCTGACCCAAGTCTCCTTAACTTTATCACAGCAACTGCTATTCTACGA 2516
||||||||||| || ||||||||||||||||||||||||||||| ||||||||| |||||
Sbjct 2455 CAGTACTCGTCGTCCGACCCAAGTCTCCTTAACTTTATCACAGCGACTGCTATTTTACGA 2514
Query 2517 GCAGAGACATTTGGGATCCCAATACCTGAGTGGACCAAGAACCCAAAGGAAGCAGCCGAA 2576
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct 2515 GCAGAGACATTTGGGATCCCGATACCTGAGTGGACTAAGAACCCAAAGGAAGCAGCAGAA 2574
Query 2577 GCTGTGGACAGAGTGATAGTCCCAGACTTTGAGCCAAGGAAAGATGCAAAGATTGTGACT 2636
||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2575 GCTGTTGACAGAGTGATAGTCCCAGACTTTGAGCCAAGGCAAGATGCAAAGATTGTGACT 2634
Query 2637 GATGAGAAAGCCACCACTTTAACCACTGCTTCGGTGGACGATGCTGCAGTCATCAACGAT 2696
||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 2635 GATGAGAAAGCTACCACTTTAACCACTGCTTCGGTGGACGACGCTGCAGTCATCGACGAT 2694
Query 2697 CTCATTGCTAAGATCGAGCAGTGTAGGCGTAACTTGTCTCCAGACTTCAGGATGAAACCA 2756
||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||
Sbjct 2695 CTCATTGCTAAGATCGACCAGTGTAGGCATAACTTGTCGCCAGACTTCAGGATGAAACCT 2754
Query 2757 ATTCAGTTTGAAAAGGATGATGATACAAACTATCACATGGACGTGATAGCGGGACTAGCC 2816
|||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 2755 ATTCAGTTCGAAAAGGATGATGATACAAACTATCACATGGATGTGATAGCAGGACTAGCC 2814
Query 2817 AACATGAGGGCGAGGAATTACACCATTCCTGAAGTCGACAAGCTGAAAGCAAAGTTCATC 2876
|||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct 2815 AACATGAGGGCGAGAAATTACAGCATCCCTGAAGTGGACAAGCTGAAAGCAAAGTTCATA 2874
Query 2877 GCAGGTAGAATCATTCCAGCCATTGCAACTTCAACAGCCATGGCTACTGGGCTGGTCTGC 2936
||||| |||||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 2875 GCAGGGAGAATCATCCCAGCCATTGCGACTTCAACAGCCATGGCTACTGGGCTGGTCTGC 2934
Query 2937 CTCGAGCTGTACAAGGTCCTTGATGGAGGACACAAAGTGGAAGACT-ACAGAAACACATT 2995
|||||||||||||||||||||||||||||||| |||||||||| || |||||||||||||
Sbjct 2935 CTCGAGCTGTACAAGGTCCTTGATGGAGGACATAAAGTGGAAG-CTTACAGAAACACATT 2993
Query 2996 TGCCAACCTGGCACTTCCACTCTTCTCCATGGCTGAACCAGTTCCACCAAAGGTGGTGAA 3055
||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 2994 TGCCAACCTGGCACTTCCACTATTCTCCATGGCTGAACCACTTCCACCAAAGGTGGTGAA 3053
Query 3056 GCACCGTGACATGGCTTGGACCGTTTGGGACAGATGGGTTCTCAAGGGAAACCCGACTCT 3115
||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 3054 GCACCGTGACATGGCTTGGACAGTTTGGGACAGATGGGTTCTCAAGGGAAACCCAACTCT 3113
Query 3116 TCGTGAGGTGTTACAGTGGCTGGAGGACAAAGGGCTTAGCGCATACAGCATCTCGTGTGG 3175
|||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3114 TCGTGAGGTGTTGCAGTGGCTGGAGGACAAAGGGCTTAGCGCATACAGCATCTCTTGTGG 3173
Query 3176 AAGCTGTCTTCTGTTCAACAGTATGTTCCCAAGGCACAAGGAGAGGATGGACAAGAAGGT 3235
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 3174 AAGCTGTCTTCTGTTCAACAGTATGTTCACAAGGCACAAGGAGAGGATGGACAAGAAGGT 3233
Query 3236 TGTGGATCTTGCTCGGGATATCGCGAAAGTCGAGTTACCACCTTACCGCCACCATCTTGA 3295
||||||||| ||||||||| | ||||||||||||||||| ||||| ||| ||||||||||
Sbjct 3234 TGTGGATCTCGCTCGGGATGTTGCGAAAGTCGAGTTACCGCCTTATCGCAACCATCTTGA 3293
Query 3296 TGTAGTGGTGGCTTGTGAGGATGAAGATGACAATGACGTCGATATTCCTCTCGTCTCTAT 3355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3294 TGTAGTGGTGGCTTGTGAGGATGAAGATGACAATGACGTCGATATTCCTCTCGTCTCTAT 3353
Query 3356 CTACTTCAGGTGAGAATTTTCGAACGAAAAACAGACAGAATGAAAGAAAGATTAAACTCT 3415
||||||||||||| || |||||| || || | |||| ||||||| |||||||
Sbjct 3354 CTACTTCAGGTGAAAAGTTTCGA--GA------GA-A---TGAA-GAAAGATGAAACTCT 3400
Query 3416 TGAGAGCAAATTTGTGTGTTTTTGTCTCTGCATCTGCCCTACGT-ATTTTCTTT-GGATG 3473
|||||||||||||||||||||| ||||||||||||||||||||| ||| ||||| |||||
Sbjct 3401 TGAGAGCAAATTTGTGTGTTTT-GTCTCTGCATCTGCCCTACGTTATTATCTTTTGGATG 3459
Query 3474 CTTGTGGGTGAGATGACTGATTTTTAAATTGCGGGGGATAGAGACCCATTTTATCATCTC 3533
|||||||||||||| ||||||||||| ||| ||||||||||||| ||||||||| ||||
Sbjct 3460 CTTGTGGGTGAGATAACTGATTTTTAC-TTGAGGGGGATAGAGACTCATTTTATC-TCTC 3517
Query 3534 TCGTTCTATTTATAGTCTTTCTTTCTATGTATAATTGCTGA-TGTGTGTTTTACACACCC 3592
||||||||||| ||||||||||||||||||| ||||||||| |||||| |||||||||||
Sbjct 3518 TCGTTCTATTT-TAGTCTTTCTTTCTATGTACAATTGCTGAATGTGTGGTTTACACACCC 3576
Query 3593 GTTACCATCTATCTGAACATGCTTTCTATCAAACAAATCT 3632
|||||| |||| |||||| || |||||||||||||||
Sbjct 3577 GTTACCTTCTA----AACATG-TT-CTATCAAACAAATCT 3610
> AT5G06460.1 | Symbols: ATUBA2, UBA 2 | ubiquitin activating enzyme
2 | chr5:1970029-1974527 FORWARD LENGTH=3438
Length=3438
Score = 2036 bits (1102), Expect = 0.0
Identities = 2462/3104 (79%), Gaps = 152/3104 (5%)
Strand=Plus/Plus
Query 335 TCAGGAGATTGATGAAGATCTGCATAGTC-GGCAGCTCGCCGTCTATGGTCGTGAGACTA 393
||||||||| ||||||||||| ||||| | | ||||||||||| || || ||||||||||
Sbjct 260 TCAGGAGATCGATGAAGATCTTCATAG-CAGACAGCTCGCCGTTTACGGCCGTGAGACTA 318
Query 394 TGAGG-CGTCTCTTT-GCTTCGAATGTTCTCATCTCGGGGATGCACGGG-CTTGGTGCCG 450
||||| | || ||| ||||| || ||||||||||| |||||||| ||| ||||||| |
Sbjct 319 TGAGGAAG-CT-TTTCGCTTCCAACGTTCTCATCTCTGGGATGCA-GGGCCTTGGTGTTG 375
Query 451 AGATTGCCAAGAATCTTATTCTTGCTGGTGTGAAGTCTGTGA-CCTTGCATGATGAAAGA 509
|||||||||||||| ||||||| |||||||||||||| |||| |||| || ||||||| |
Sbjct 376 AGATTGCCAAGAATATTATTCTAGCTGGTGTGAAGTCAGTGACCCTT-CACGATGAAA-A 433
Query 510 -GTTGTAGAGCTATGGGACTTATCTAGCAACTTTGTTTTCTCGGAGGATGATGTTGGCAA 568
|| || |||||||||||| ||||||| |||||||||||| ||||||| || |||| ||
Sbjct 434 TGTGGTTGAGCTATGGGACCTATCTAGTAACTTTGTTTTCACGGAGGAGGACATTGGTAA 493
Query 569 GAATAGAGCGGATGCTTCTGTTCAGAAGTTACAGGATCTTAACAATGCTGTGGTTGTCTC 628
||||||||| |||||||||||| ||||| || || || ||||||||||||| ||||||
Sbjct 494 GAATAGAGCACTTGCTTCTGTTCACAAGTTGCAAGAACTCAACAATGCTGTGGCTGTCTC 553
Query 629 TAGC-TTGAC-CAAAAGCTTAACTAAAGAGGATCTTTCTGGTTTCCAGGTTGTTGT-TTT 685
| | ||||| ||| ||||| |||||| | ||||||| |||||||||||| || |||
Sbjct 554 -AACTTTGACTGGGAAG-TTAACCAAAGAGCAGCTTTCTGATTTCCAGGTTGTGGTATTT 611
Query 686 CTCTGACATAAGC-ATGGA-AAGAGCAATC-GA-ATTTGATGACTATTGTCACAGCCATC 741
| || || | | || || ||| | | || | ||||||| ||||||||||| ||||
Sbjct 612 GT-GGATAT-CTCTTTTGAGAA-AGCGA-CAGAGA-TTGATGATTATTGTCACAGTCATC 666
Query 742 AGCCTCCTATCGCTTTTGTCAAAGCTGACGTCAGGGGTCT-TTTCGGCTCTGTCTTTTGT 800
|||||||||| || || |||| ||||| || ||||| || ||| || ||| | ||||||
Sbjct 667 AGCCTCCTATTGCATTCATCAAGGCTGATGTTAGGGGGCTGTTT-GGGTCTTTGTTTTGT 725
Query 801 GATTTTGGGCCTGAATTTGCGGTTCTTGATGTTGATGGAGAGGAACCCCA-TACAGGCAT 859
|||||||| ||| | ||| | ||||||||||||||||| |||||||| || | | |||||
Sbjct 726 GATTTTGGACCTCATTTTACTGTTCTTGATGTTGATGGGGAGGAACCTCACT-CTGGCAT 784
Query 860 CATTGCGTCT-ATCTCTAATGAGAA-CCAGGCATTTATTTCCTGTGTCGACGATGAGAGG 917
||| || ||| | | ||||| || || || |||| |||| |||||||| |||||||||
Sbjct 785 CATCGCTTCTGTTAGC-AATGAAAATCCTGG-ATTTGTTTCGTGTGTCGATGATGAGAGG 842
Query 918 CTTGAATTTGAAGATGGTGACCTAGTTGTTTTCTCAGAAGTTGAGGGCATGACAGAATTG 977
|| || ||||||||||| | | ||||||||||| ||||||||||| |||||||| |
Sbjct 843 CTCGAGTTTGAAGATGGAAATTTGGTTGTTTTCTCTGAAGTTGAGGGAATGACAGAGCTA 902
Query 978 AATGATGGGAAACCAAGGAAGATAAAAAGTG-CACGGCCATATTCATTCATTCTTGATGA 1036
|||||||| ||||||||||||||||||| || || ||||| |||||| | || || ||
Sbjct 903 AATGATGGAAAACCAAGGAAGATAAAAAATGTCA-AGCCATTTTCATTTACCCTGGAGGA 961
Query 1037 GGACACTTCAAACTAT-GGAACATATGTGAAGGGTGGTATTGTCACTCAAGTGAAACAGC 1095
||||| || | |||| || | |||| |||||||||| ||||| ||||| || ||||| |
Sbjct 962 AGACACCTCTAGCTATGGGCA-ATATATGAAGGGTGGCATTGTGACTCAGGTTAAACAAC 1020
Query 1096 CTAAGTTGCTGAA-TTTCAAGCCACTGAGGGAAGCACTTAAAGATCCAGGGGATTTTCTA 1154
| ||| || |||| ||| || || || || |||||||||||||||||||| || |||||
Sbjct 1021 CAAAGGTGTTGAACTTT-AAACCTCTTAGAGAAGCACTTAAAGATCCAGGCGACTTTCT- 1078
Query 1155 T-TTAGTGA-TTTCTCTAAGTTTGACCGCCCTCCACTTCTTCACTTAGCATTCCAGGCAC 1212
| | ||||| ||| || ||||||||||| || || ||||| |||||||||||||| ||||
Sbjct 1079 TCTAAGTGACTTT-TCAAAGTTTGACCGACCACCTCTTCTCCACTTAGCATTCCAAGCAC 1137
Query 1213 TTGATCA--TTTTAAAG-CTGAAGCTGGCAGATTTCCTG-TTGCTGGCTCAGAAGAGGAC 1268
||||| | |||| | || |||| ||| ||||||| | ||||||| |||||||| ||
Sbjct 1138 TTGAT-AGGTTTT--CGTCTCAAGCAGGCCGATTTCC-GTTTGCTGGTTCAGAAGAAGAT 1193
Query 1269 GCTCAGAAGCTTATATCG--ATTGCCA-CAGCCATCAATACCGGG-CAGGGTGATTTAAA 1324
|||||||| | || | | |||| || | ||| ||| ||| |||||| | ||
Sbjct 1194 GCTCAGAAAC-TA-GTGGAAATTG-CAGTTGACATTAAT-GAGGGTTTGGGTGA-TGCAA 1248
Query 1325 GG-TGG-AGAATGTTGAC-CAGAAGCT-TCTACGACACTTT-TCCTTTGGAGCCAAGGCT 1379
|| ||| || |||| || | || || | | || || ||| |||||||| ||| ||||
Sbjct 1249 GGTTGGAAG-ATGTCAACTC-TAAACTGT-TGCGGCA-TTTGGCCTTTGGATCCAGGGCT 1304
Query 1380 GTCCTGAATCCCATGGCTGCAATGTTTGGCGGTATTGTTGGACAGGAGGTTGTTAAAGCT 1439
|| |||||||| ||||||||||||||||| || |||||||| ||||||||||| || ||
Sbjct 1305 GTTCTGAATCCTATGGCTGCAATGTTTGGTGGCATTGTTGGGCAGGAGGTTGTCAAGGCA 1364
Query 1440 TGCTCTGGAAAATTTCATCCTCTCTTCCAGTT-TTTCTACTTTGATTCAGTGGAGTCACT 1498
|||||||| ||||| |||||| |||| ||||| ||| ||||||||||| |||||||||||
Sbjct 1365 TGCTCTGGGAAATTCCATCCTATCTTTCAGTTCTTT-TACTTTGATTCGGTGGAGTCACT 1423
Query 1499 ACCCACTGAACCTCTGGACTCG-AGT--GACTTT-GCACCA-AGAAACAGCCGGTATGAT 1553
|||| |||||||| || | | | | || ||| | |||| | ||| ||||| || |||
Sbjct 1424 CCCCAAGGAACCTCTTGA-T-GCA-TCAGAGTTTAG-ACCACA-AAATAGCCGTTACGAT 1478
Query 1554 GCCCAAATATCTGTATTTGGGGCCAAGT-TCCAGAAGAAACTTGAAGATGCTAAAGTTTT 1612
|| || || ||||||||| ||| | | | | ||||||||||| || ||||| | ||||||
Sbjct 1479 GCACAGATCTCTGTATTT-GGGTCTACTCTTCAGAAGAAACTCGAGGATGCCAGAGTTTT 1537
Query 1613 CACAGTAGGGTCTGGTGCTCTTGGCTGTGAGTTCTTGAAA-AA-TATGGCTCTGATGGGG 1670
|||||| ||||||||||||| || |||||||| ||| || | ||||| |||||||
Sbjct 1538 TGTTGTAGGGGCTGGTGCTCTTGGATGCGAGTTCTT-AAAGAACT-TGGCTTTGATGGGT 1595
Query 1671 GTTTCTTGTGGAAGCCAAGGGAAGCTGACAGTGACAGATGATGATATAATCGAGAAGAGT 1730
|| || ||||| | |||||||||||| || || || ||||||||| |||| ||||||||
Sbjct 1596 GTGTCATGTGGCACCCAAGGGAAGCTAACTGTCACCGATGATGATGTAATTGAGAAGAGC 1655
Query 1731 AACCTCAGTCGTCAATTTCTGTTCCGTGACTGGAACATCGGACAGGCTAAATCCACAGTT 1790
||||| |||||||| ||||| || || || |||||||| |||||||||||||||||||||
Sbjct 1656 AACCTGAGTCGTCAGTTTCTTTTTCGAGATTGGAACATAGGACAGGCTAAATCCACAGTT 1715
Query 1791 GCTGCTTCGGCTGCTGCTGCTATAAATCCCCGCTTCAACATTGAGGCCCTGCAAAACCGT 1850
|| || | || || |||| |||||| | ||| |||||||||| || |||||||| |||
Sbjct 1716 GCCGCAACAGCAGCAGCTGGAATAAATTCTCGCCTCAACATTGATGCTCTGCAAAATCGT 1775
Query 1851 GTTGG-CGCTGAGACTGAGAATGTATTTGACGA-TGCCTTCTGGGAGAACTTAACTGTTG 1908
||||| | ||||||| |||||||| |||||||| | |||||||||||| || || ||||
Sbjct 1776 GTTGGAC-CTGAGACCGAGAATGTCTTTGACGACAG-CTTCTGGGAGAATTTGACAGTTG 1833
Query 1909 TCGTCAATGCACTGGATAATGTCAATGCGAGGCTCTATGTTGATTCGAGGTGCT-TGTAT 1967
| || || || |||| ||||||| ||| ||||| ||||||||||| ||||| | |||||
Sbjct 1834 TGGTGAACGCTTTGGACAATGTCACTGCAAGGCTTTATGTTGATTCAAGGTG-TGTGTAT 1892
Query 1968 TTCCAGAAGCCTCTCCTTGAGTCTGGAACTCTTGGTGCAAAGTGCAACACACAGATGGTT 2027
||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||||||
Sbjct 1893 TTCCAGAAGCCTCTCCTCGAGTCAGGAACCCTAGGTGCAAAGTGCAACACACAGATGGTT 1952
Query 2028 ATCCCACATCTAACTGAAAATTACGGTGCCTCAAGGGACCCACCAGAGAAACAAGCCCCC 2087
||||| || || ||||| || || |||||||| || ||||||||||||||||| || ||
Sbjct 1953 ATCCCTCACCTCACTGAGAACTATGGTGCCTCGAGAGACCCACCAGAGAAACAGGCTCCA 2012
Query 2088 ATGTGTACAGTGCATTCGTTTCCGCATAACATTGATCACTGTTTAACTTGGGCTCGCTCT 2147
||||| || ||||| || ||||| || ||||||||||| || ||||| ||||||||||||
Sbjct 2013 ATGTGCACCGTGCACTCATTTCCTCACAACATTGATCATTGCTTAACATGGGCTCGCTCT 2072
Query 2148 GAGTTTGAGGGTCTGCTGGAGAAGACTCCTGCTGAAGTGAATGCATATCTCTCTAGC-CC 2206
|| ||||||||| |||| ||||| || || |||||||| |||||||| ||||| || ||
Sbjct 2073 GAATTTGAGGGTTTGCTTGAGAAAACACCAGCTGAAGTTAATGCATACCTCTC-AGATCC 2131
Query 2207 AGTTGAGTACACT-AACTCAATGATGAG-TGCTGGTGATGCTCAGGCGAGGGAGACATTG 2264
||||| |||| | || | |||| || |||||||||||| || || ||||| || |||
Sbjct 2132 TGTTGAATACA-TGAAAGCGATGA-GAACTGCTGGTGATGCCCAAGCAAGGGATACTTTG 2189
Query 2265 GAGA-G-GATTCTTGAGTGCCTTGACAAGGAGAAGTGTGAGACCTTCCAAGACTGCTTAA 2322
| || | | || |||||||||| || || || ||||| | | ||||| || ||| |||
Sbjct 2190 G-GACGTG-TTGTTGAGTGCCTCGAGAAAGAAAAGTGCAATTCATTCCAGGATTGCATAA 2247
Query 2323 CCTGGGCTCGACTGAGGTTTGAGGATTACTTTGTGAACCGTGTCAAGCAATTGATAT-AC 2381
|||||||||| |||||||||||||| ||||| | |||||||| ||||| || || | ||
Sbjct 2248 CCTGGGCTCGTCTGAGGTTTGAGGACTACTTCGCCAACCGTGTGAAGCAGTT-ATGTTAC 2306
Query 2382 ACATTTCCTGAAGATGCTGCGACTAGTACCGGATCTCCATTCTGGTCTGCTCCGAAA-AG 2440
||||||||||| |||||||| |||||||| ||| |||| ||||||||||| || ||| ||
Sbjct 2307 ACATTTCCTGAGGATGCTGCTACTAGTACAGGAGCTCCGTTCTGGTCTGCCCC-AAAGAG 2365
Query 2441 ATTCCCTCGTCCACTCCAGTACTCGTCTTCTGACCCAAGTCTCCT-T-AACTTTATCACA 2498
||| ||||| |||||||| | ||| || | |||| || | | | | |||||| |||
Sbjct 2366 ATTTCCTCGCCCACTCCAATTCTCCTCAACCGACCTGAG-C-CATATCAACTTTGTCATG 2423
Query 2499 GCAAC-TGCTATTCTA-CGAGCAGAGACATTTGGGATCCCAA-TACCTGAGTGGACCAAG 2555
|| | | |||| || |||||||||||||| || ||||| | | ||||||||| | ||
Sbjct 2424 GCTGCAT-CTAT-CTTGCGAGCAGAGACATTCGGAATCCCTACT-CCTGAGTGGGCTAA- 2479
Query 2556 AACCCAA--AGGAAGCAGCCGAAGCTGTGGACAGAGTGATAGTCCCAGACTTTGAGCC-A 2612
||||| | |||| |||||| |||||||| ||||| || ||||| ||||||||||| |
Sbjct 2480 AACCCGAGCAGGACT-AGCCGAGGCTGTGGAAAGAGTAATTGTCCCCGACTTTGAGCCGA 2538
Query 2613 AGGAAAGATGCAAAGATTGTGACTGATGAGAAAGCCACCACTTTAACCACTGCTTCGGTG 2672
|| |||||||||| |||||||| |||||||| || || ||||| | || ||||| ||
Sbjct 2539 AG-AAAGATGCAACTATTGTGACAGATGAGAAGGCTACAACTTTGTCTACAGCTTCAGTC 2597
Query 2673 GACGATGCTGCAGTCATCAACGATCTCATTGCTAAGA-TCGAGCAGTGTAGGCGTAA-CT 2730
|| ||||| ||||| ||| | || || | || || | | | || ||| ||| | | ||
Sbjct 2598 GATGATGCAGCAGTAATCGATGAACTAAACGCAAA-ACTAGTGCGGTGCAGGA-TGAGCT 2655
Query 2731 TGTCT-CCAGACTTCAGGATGAAACCAATTCAGTTTGAAAAGGATGATGATACAAACTAT 2789
|| | ||||| ||||||||||| |||| |||||||||||||| |||||||| |||||
Sbjct 2656 TG-CAGCCAGAGTTCAGGATGAAGGCAATCCAGTTTGAAAAGGACGATGATACCAACTAC 2714
Query 2790 CACATGGACGTGATAGC-GGGACTAGCCAACATGAGGGCGAGGAATTACACCATTCCTGA 2848
|||||||| |||| || ||| |||||||||||||| || ||||| |||| |||| ||
Sbjct 2715 CACATGGATATGATCGCTGGG-CTAGCCAACATGAGAGCAAGGAACTACAGTGTTCCCGA 2773
Query 2849 AGTCGACAAGCTGAAAGCAAAGTTCATCGCAGGTAGAATCATTCCAGCCATTGCAACTTC 2908
|| |||||||| ||||| |||||||| || || |||||||| || || ||||| || ||
Sbjct 2774 GGTGGACAAGCTTAAAGCCAAGTTCATAGCCGGAAGAATCATACCCGCGATTGCGACATC 2833
Query 2909 AACAGCCATGGCTACTGGGCTGGTCTGCCTCGAGCTGTACAAGGTCCTT-GATGGAGG-A 2966
||| || ||||| || || | || ||||| ||| ||||||||||| || || || | |
Sbjct 2834 AACTGCAATGGCAACAGGTTTTGTTTGCCTTGAGATGTACAAGGTC-TTAGACGG-GTCA 2891
Query 2967 CACAAAGTGGAAGACTACAGAAACACATTTGCCAACCTGGCACTTCCACTCTTCTCCATG 3026
|||||||| ||||||||||||||||||||||| ||| | |||||||| ||||||||||||
Sbjct 2892 CACAAAGTAGAAGACTACAGAAACACATTTGCTAACTTAGCACTTCCGCTCTTCTCCATG 2951
Query 3027 GCTGAACCAGTTCCACC-AAAGGTGGTGAAGCACCGTGAC-ATGGCTTGGACCGTTTGGG 3084
||||| || |||||||| |||| |||||||||||| ||| | ||| |||| |||||||
Sbjct 2952 GCTGAGCCGGTTCCACCTAAAG-TGGTGAAGCACCAAGACCAAAGCT-GGACTGTTTGGG 3009
Query 3085 ACAGATGGGTTCTCAAGGGAAACCCGACTCTTCGTGAGGTGTTACAGTGGCTGGAGGACA 3144
|| | ||||| | | |||||||||||| || | ||| || || | ||||| | || |
Sbjct 3010 ACCGGTGGGTGATGAGGGGAAACCCGACCCTAAGGGAGTTGCTAGACTGGCTAAAAGAGA 3069
Query 3145 AAGGGCTTAGCGCATACAGCATCTCGTGTGGAAGCTGTCTT-CTGTTCAACAGTATGTTC 3203
||||||| | |||||||||||| || || |||||| || || |||| |||||||||||||
Sbjct 3070 AAGGGCTAAACGCATACAGCATATCTTGCGGAAGCAGT-TTACTGTACAACAGTATGTTC 3128
Query 3204 CCAAGGCACAAGGAGAGGATGGACAAGAAG-GTTGTGGATCTTGCTCGGGATATCGC-GA 3261
||||||| || ||||||||| ||| |||| || ||||||||||| | || | || |
Sbjct 3129 TCAAGGCATAAAGAGAGGATGAACA-GAAGAGTGGTGGATCTTGCAAGAGACGTGGCTGG 3187
Query 3262 AAGTCGAGTTACCACCTTACCGCCACCATCTTG-ATGTAGTGGTGGCTTGTGAGGATGA- 3319
|| || || || |||| | | || | || |||| || || |||||||| |||||
Sbjct 3188 G-GTTGAATTGCCTGCTTATAGACGTCA-CGTGGATGTTGTAGTCGCTTGTGAAGATGAT 3245
Query 3320 AGATGACAATGACGTCGATATTCCTCTCGTCTCTA-TCTACTTC 3362
| |||| |||||| ||||| |||||||| || | ||||||||
Sbjct 3246 A-ATGATGCTGACGTTGATATCCCTCTCGTATC-AGTCTACTTC 3287
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 180851829515
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5