BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg481925
Length=1496
Score E
Sequences producing significant alignments: (Bits) Value
AT2G30140.1 | Symbols: | UDP-Glycosyltransferase superfamily p... 2023 0.0
> AT2G30140.1 | Symbols: | UDP-Glycosyltransferase superfamily
protein | chr2:12872134-12873820 FORWARD LENGTH=1563
Length=1563
Score = 2023 bits (1095), Expect = 0.0
Identities = 1378/1513 (91%), Gaps = 26/1513 (2%)
Strand=Plus/Plus
Query 1 ACTCTCTTCTTCACCTCTTCAAGTCACAGTGACC---A--A-A-A--TCAC-----AC-A 45
||||||||||||||||| |||||||||||||||| | | | | |||| || |
Sbjct 4 ACTCTCTTCTTCACCTCCTCAAGTCACAGTGACCAAAATCACACACTTCACAAGAAACAA 63
Query 46 -CTATGGATCCAAATGAATCTCCACCAAACCAATTTCGCCACGTGGTGGCCATGCCTTAT 104
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 64 CCTATGGATCCAAATGAATCTCCACCAAACCAATTTCGCCACGTGGTGGCCATGCCTTAT 123
Query 105 CCAGGTCGAGGCCACATCAACCCAATGATGAACCTCTGCAAACGCCTTGTCCGTCGATAC 164
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 124 CCAGGTCGAGGACACATCAACCCTATGATGAACCTCTGCAAACGCCTTGTCCGTCGATAC 183
Query 165 CCTAACCTTCACGTCACCTTCGTAGTCACAGAAGAATGGCTCGGGTTTATTGGATCCAAC 224
||||||||||||||||||||||| |||||||||||||||||||||||||||||| || ||
Sbjct 184 CCTAACCTTCACGTCACCTTCGTCGTCACAGAAGAATGGCTCGGGTTTATTGGACCCGAC 243
Query 225 CCGAAACCTGACCGGATCCATTTCGCAACTCTCCCTAATCTCATCCCCTCCGAGCTCGTC 284
|||||||| ||||||||||||||| | |||||||||||||||||||| |||||||| |||
Sbjct 244 CCGAAACCCGACCGGATCCATTTCTCCACTCTCCCTAATCTCATCCCTTCCGAGCTTGTC 303
Query 285 CGGGCCAAGGACTTCATAGGCTTCATTGATGCGGTCTACACAAGATTGGAAGAGCCCTTC 344
||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||
Sbjct 304 AGGGCCAAAGACTTCATAGGCTTCATTGATGCCGTCTACACAAGATTGGAAGAACCATTC 363
Query 345 GAGAAGCTTCTTGACGGCCT-AACTTCGCCGCCTCCGAGTGCGATCA-TCGCCGACACTT 402
||||||||||||||| |||| || ||| || |||||||||| || | ||||||||||||
Sbjct 364 GAGAAGCTTCTTGACAGCCTCAA-TTCACCACCTCCGAGTGTAAT-ATTCGCCGACACTT 421
Query 403 ACGTCATTTGGGCAGTGCGAGTCGGCAGAAGAAGGAATATTCCGGTGGTTTCTCTCTGGA 462
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 422 ACGTCATTTGGGCTGTGCGAGTCGGCAGAAAAAGGAATATTCCGGTGGTTTCTCTCTGGA 481
Query 463 CCATGTCAGCCACAATTCTCTCTTTCTTCCTTCACTCTGATCTACTCATAAGTCATGGCC 522
||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 482 CCATGTCAGCCACGATTCTCTCCTTCTTCCTCCACTCTGATCTACTCATAAGTCATGGCC 541
Query 523 ATGCTCTGTTCGAACCATCAGAAGAAGAGGTTGTTGATTACGTCCCCGGTTTACCTCCGA 582
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 542 ATGCTCTGTTCGAACCATCAGAAGAAGAGGTTGTTGATTACGTCCCCGGTTTATCTCCGA 601
Query 583 CCAAACTCCGAGATTTGCCTCCTATATTCGATGGTTACAGCCACCGAGTTTTCAAGACAG 642
| ||||||||||||||||| || ||||| || ||||||||| ||||||| ||||||||||
Sbjct 602 CGAAACTCCGAGATTTGCCGCCGATATTTGACGGTTACAGCGACCGAGTCTTCAAGACAG 661
Query 643 CCAAGTTGTGTTTCGATGAGCTTCCGGGAGCTAAGTGTCTACTTTTCACCACTGCTTATG 702
| ||||||||||||||||| || || ||||||| || | |||| |||||||| || ||||
Sbjct 662 CTAAGTTGTGTTTCGATGAACTACCAGGAGCTAGGTCTTTACTCTTCACCACCGCCTATG 721
Query 703 AGCTCGAACCCAAAGCCGTTGACGCTTTCAGCTCCAAGCTTGATATCCCGGTCTACGCTA 762
|||| |||| |||||| |||||||||||| ||||||||| |||||||||||||||||||
Sbjct 722 AGCTTGAACACAAAGCTATTGACGCTTTCACCTCCAAGCTCGATATCCCGGTCTACGCTA 781
Query 763 CTGGTCCTTTAATACCATTTGAAGAACTTTCTGTCCAAAATGATAACAAGGAACCTGATT 822
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 782 TTGGTCCTTTAATACCTTTTGAAGAACTTTCTGTTCAAAATGATAACAAGGAACCTAATT 841
Query 823 ACATCCGGTGGCTTGACGAGCAACCGGAAAGCTCTGTACTTTACATATCTCAGGGGAGTT 882
|||||| ||||||||| || ||||||||| ||||||| ||||||||||||||||| ||||
Sbjct 842 ACATCCAGTGGCTTGAGGAACAACCGGAAGGCTCTGTTCTTTACATATCTCAGGGAAGTT 901
Query 883 TTCTCTCGGTTTCGGAAGCTCAGATGGAAGAAATAGTGAAAGGAGTAAGAGAAAGTGGAG 942
|||| ||||| ||||||||||||||||| ||||||||||||||| | |||||||||||||
Sbjct 902 TTCTTTCGGTCTCGGAAGCTCAGATGGAGGAAATAGTGAAAGGACTGAGAGAAAGTGGAG 961
Query 943 TCCGGTTCCTTTGGGTGGCTCGTGGAGGCGAATCGAAG-TTGAAGGAGACT-TTAGAAGG 1000
||||||| ||||||||||||||||| ||||| | ||| || |||||| || || |||||
Sbjct 962 TCCGGTTTCTTTGGGTGGCTCGTGGGGGCGAGTTAAAGCTT-AAGGAGGCTCTT-GAAGG 1019
Query 1001 TAGCTCGGGTGTTGTTGTGAGCTGGTGTGATCAGCTTCGTGTGCTCTGCCACGCGGCTGT 1060
||||| ||||| || ||||||||||||||||||||||| ||||| || ||| |||||
Sbjct 1020 TAGCTTAGGTGTAGTGGTGAGCTGGTGTGATCAGCTTCGGGTGCTGTGTCACAAAGCTGT 1079
Query 1061 AGGCGGGTTTTGGACACATTGCGGGTTTAACTCAACATTGGAAGGGATATATTCGGGAGT 1120
||||||||||||||| ||||||||||||||||| |||||||||||||||||||| |||||
Sbjct 1080 AGGCGGGTTTTGGACTCATTGCGGGTTTAACTCGACATTGGAAGGGATATATTCAGGAGT 1139
Query 1121 ACCGATGCTGGCGTTTCCGTTGTTTTGGGATCAGATTTTGAATGCTAAGATGATTGTTGA 1180
||| ||||| ||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct 1140 ACCAATGCTAGCGTTTCCGTTGTTTTGGGATCAGATTCTGAACGCTAAGATGATTGTTGA 1199
Query 1181 GGACTGGAGAGTCGGAATGAGGATCGAGAGGGCGAAAAAGGCGGAGTTGTTGATAGGGAG 1240
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct 1200 GGACTGGAGAGTCGGAATGAGGATCGAGAGGACGAAAAAGAATGAGTTGTTGATAGGGAG 1259
Query 1241 AGAGGAGATTAAGGAAGTAGTGAAAAGGTTTATGGATagagagagtgaagaagggaaaga 1300
||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1260 AGAGGAGATCAAGGAAGTAGTGAAGAGGTTTATGGATAGAGAGAGTGAAGAAGGGAAAGA 1319
Query 1301 gatgagaagaagagCTTGTGACCTCAGTGAAATCAGTCGAGGAGCTGTTGCGAAAAGCGG 1360
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1320 GATGAGAAGAAGGGCTTGTGACCTTAGTGAAATCAGTCGAGGAGCTGTTGCGAAAAGCGG 1379
Query 1361 TTCGTCTAATGTTAACATTGATGCTTTCGTTAGGCATGTTACCAATACAAATTAAGGCTC 1420
|||||||||||| ||||| |||| |||||| ||||| ||||||||||||||||||||||
Sbjct 1380 TTCGTCTAATGTAAACATCGATGAGTTCGTTCGGCATATTACCAATACAAATTAAGGCTC 1439
Query 1421 AATGAGGTTTTGTTGTTTCAATACAAAT-TCAGGCTCAATGATATATTCACTAAATCATA 1479
|| |||||||| |||||||||||||| | | |||||||||| || |||||||||||||
Sbjct 1440 AAAGAGGTTTTATTGTTTCAATACAA-TGTAAGGCTCAATGGCATGCTCACTAAATCATA 1498
Query 1480 TGTATCTTTTGAA 1492
|||||||||||||
Sbjct 1499 TGTATCTTTTGAA 1511
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73794801150
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5