BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg481974 Length=2713 Score E Sequences producing significant alignments: (Bits) Value AT2G30600.5 | Symbols: | BTB/POZ domain-containing protein | c... 2302 0.0 AT2G30615.1 | Symbols: | BEST Arabidopsis thaliana protein mat... 529 6e-149 > AT2G30600.5 | Symbols: | BTB/POZ domain-containing protein | chr2:13036876-13041684 FORWARD LENGTH=3134 Length=3134 Score = 2302 bits (1246), Expect = 0.0 Identities = 1347/1397 (96%), Gaps = 2/1397 (0%) Strand=Plus/Plus Query 43 AAGGCAAGTGGTTTTATGAAGAAAGATGGTTGCGGCGAAAGAGAACAAGTTTCTGACGGT 102 |||||||| | |||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 333 AAGGCAAGAGATTTTATGAAGAAAGATGGTTGCGGCGAAAGAGAACAAGTTTCTGACAGT 392 Query 103 GGCACCTTTCGAGTGTGCGTGGAGTGATGATCTGAAGTTCCGGGAGGCGGGAAGAGGTTG 162 ||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 393 GGCACCTTTTGAGTGTGCTTGGAGTGATGATCTGAAGTTCCGGGAAGCGGGAAGAGGTTG 452 Query 163 TGTTGCGTTTGATGCGTTTGCTCACAATGATGTCACGGTGGTGTTCAGAGAGAATGTGGG 222 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 453 TGTTGCGTTTGATGCGTTTGCTCACAATGATGTCACGGTGGTGTTTAGAGAGAATGTGGG 512 Query 223 GACGCAACATTACCATTATAAGAAAGATAATAGTCCTCATTACATTGTTATCATCGGTAG 282 ||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct 513 GACTCAACATTACCATTATAAGAAAGATAATAGTCCTCACTACATTGTTATCATTGGTAG 572 Query 283 CAATAGGAATCGTAGGTTGAAGATTCAGGTAGATGGGAAATCTGTGGTCGATGAGGAAGC 342 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 573 CAATAGGAATCGTAGGTTGAAGATTCAGGTAGATGGAAAATCTGTGGTCGATGAGGAAGC 632 Query 343 TTCTGATCTTTGTCGTTGTTCTTTGGAGTTTGAGAGTTACTGGATTAGTATCTATGATGG 402 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 633 TTCTGATCTTTGTCGTTGTTCTTTGGAGTTTCAGAGTTACTGGATTAGTATCTATGATGG 692 Query 403 GTTGATTAGCATTGGTAAAGGTCGGTATCCGTTTCAGAACCTGGTGTTTAAGTGGCAAGA 462 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 693 GTTGATTAGCATTGGTAAAGGTCGGTATCCGTTTCAGAACCTGGTATTTAAGTGGCAAGA 752 Query 463 CCCCAAGCCCAATTGTAATGTCCAGTATGTTGGCT-TGAGCAGCTGGGATAAACATGTTG 521 ||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||| Sbjct 753 CCCCAAGCCCAATTGTAATGTTCAGTATGTTGG-TCTGAGCAGCTGGGATAAACATGTTG 811 Query 522 GATATAGAAACGTGAGTGTGTTTCCTGTGACACACAATCATATCTTGCTGTGGAAGCAAG 581 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 812 GATATAGAAACGTGAGTGTGTTTCCTGTGACACATAATCATATCTTGCTGTGGAAGCAAG 871 Query 582 TGGATTGCCGTGAAGTTAAAGGAGATGAGTCTGGTGACGAGAAGTTTGCGGAGGAAGGGA 641 |||||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||| Sbjct 872 TGGATTGCCGTGAAGTTAGAGGAGATGAGTCTGGTGACGAGAAGGTTGTGGAGGAAGGGA 931 Query 642 CTGGTTATGATTATGAACAATGGGGACTTGGGAATTTTTTGGAGAGTTGGCAATTATCTG 701 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 932 CTGGTTATGATTATGAACAATGGGGACTTGGGAATTTCTTGGAGAGTTGGCAATTATCTG 991 Query 702 ACACAATCTTTCTTGTTGGTGAAGAGGAAATGGATGTCCCTGCTCACAAGGTTATATTAC 761 ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 992 ACACAGTCTTCCTTGTTGGTGAAGAGGAAATGGATGTCCCTGCTCACAAGGTTATATTAC 1051 Query 762 AAGCATCGGGTAATTTTCCTTTGAGATCATCAGATGGGGATGTCATTCAACTTCGTGGAG 821 ||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 1052 AAGCATCAGGTAATTTTCCTTTGAGATCATCTGATGGGGATGTCATTCAACTTCGTGGAG 1111 Query 822 TATCGTACCCGATTCTTCATGCACTTCTTCAATATATATATACGGGACGGACTCAGATTT 881 | |||||||||||||||||||| |||||||||||||| ||||| ||||| |||||||||| Sbjct 1112 TGTCGTACCCGATTCTTCATGCTCTTCTTCAATATATCTATACTGGACGAACTCAGATTT 1171 Query 882 TGGAATCAGAACTTGCTCCATTGCGGGATTTAAGTTCTAAGTTTGAAGTGATGCCATTGG 941 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1172 TGGAATCAGAACTTGCTCCATTGCGGGATTTAAGTTCTAAGTTTGAAGTGATGTCATTGG 1231 Query 942 TGAGACAGTGTGAAGAAAGTATAGACCAGTTAAAACTGAGCAAAAAAGAATTTGACCCCT 1001 |||||||||||||||||||||||||||| || ||| ||||||||| || ||||||| ||| Sbjct 1232 TGAGACAGTGTGAAGAAAGTATAGACCATTTTAAATTGAGCAAAACAGCATTTGACTCCT 1291 Query 1002 GCAGAAAAGTCACACTCTCGTGTCCTATTTCTCACCCGTTATCTGGTTTTATGTTCCCAA 1061 |||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| Sbjct 1292 GCAGAAAAGTCAAACTCTTGTGTCCTATTTCTCACCCGTTATCTGGCTTTATGTTCCCAA 1351 Query 1062 GTGCTTTCCCTATGGATGTGGGGAAGCTGGTAAAGTTGTACTCAACCGGCGAGTATAGTG 1121 ||||||||||| | ||||| |||||||||||||||||||||||||||||||| ||||||| Sbjct 1352 GTGCTTTCCCTGTTGATGTTGGGAAGCTGGTAAAGTTGTACTCAACCGGCGAATATAGTG 1411 Query 1122 ACATAAAAATCTATCTCAGTGACCATAGTCTCACTTTCCAATCTCACAAAGTCATTCTAA 1181 ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1412 ACATAAAAATCTACCTCAGTGACCATAGTCTCACTTTCCAATCCCACAAAGTCATTCTAA 1471 Query 1182 GTCTTTGGAGTGTCGCATTTGCCAAGATGTTTACAAATGGGATGAGTGAAAGCCATTCAT 1241 ||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1472 GTCTTTGGAGTGTTGCATTTGCAAAGATGTTTACAAATGGGATGAGTGAAAGCCATTCAT 1531 Query 1242 CAACGATTTACTTAACCGATGTATCACCAGAAGCATTCAAGGCTATGATGAATTTCATGT 1301 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1532 CAACGATTTACCTAACCGATGTATCACCAGAAGCATTCAAGGCTATGATGAATTTCATGT 1591 Query 1302 ATAGTGGAGAGTTGAACATGGAAGACACTGTGAATTTTGGCACCGAGTTGATCCATCTTC 1361 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1592 ATAGTGGAGAGTTGAACATGGAAGACACTGTGAATTTTGGCACCGAGTTGATTCATCTTC 1651 Query 1362 TCTTTCTAGCTGACCGGTTTGGAGTTGTTCCACTTCATCAAGAATGCTGCAAAATGCTCT 1421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1652 TCTTTCTAGCTGACCGGTTTGGAGTTGTTCCACTTCATCAAGAATGCTGCAAAATGCTCT 1711 Query 1422 TGGAGTGCCTCTCAGAG 1438 ||||||||||||||||| Sbjct 1712 TGGAGTGCCTCTCAGAG 1728 Score = 1875 bits (1015), Expect = 0.0 Identities = 1198/1284 (93%), Gaps = 22/1284 (2%) Strand=Plus/Plus Query 1437 AGGATTCTGTATGCTCAGTTCTCCAAGTGGTTTCGTCTATCTCATCATGTAAACTCATTG 1496 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1865 AGGATTCTGTATGCTCAGTTCTCCAAGTGGTTTCGTCTATCTCATCATGTAAACTCATTG 1924 Query 1497 AGGAGATGTGCAAGAGGAAGTTCGCCATGCACTTCGACTATTGTACCACTGCAAGTTTGG 1556 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1925 AGGAGATGTGCAAGAGGAAGTTCTCCATGCACTTCGACTATTGTACCACTGCAAGTTTGG 1984 Query 1557 ACTTTGTCTTGTTAGATCAGACCGCCTTCAGTGATATTCTTGAGTCTGCAGATCTGACAG 1616 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 1985 ACTTTGTCTTGTTAGATCAGACCACCTTCAGTGATATTCTTGAGTCTGCAGATCTGACGG 2044 Query 1617 TGACATCTGAGGAAAAGATTCTTGA-TGCTGTTCTCATGTGGTGCATGAAAGCTGAGGAG 1675 |||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 2045 TGACATCTGAAGAAAAGATTCT-GAATGCTGTTCTCATGTGGTGCATGAAAGCTGAGGAG 2103 Query 1676 TCACACAGTTGGGAAGTAATAGATGAGATGATGAACTATTCTGACCCCAAAATTTTGTTC 1735 || |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 2104 TCGCACAGTTGGGGAGTAATAGATGAGATGATGAACTATGCTGACCCCAAAAGTTTGTTC 2163 Query 1736 AAAGAAAGGCTTCAGTCACTTGATGACCTGCTGCCTCATGTACGCTTCTCTTTGTTGTCA 1795 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||| || Sbjct 2164 AAAGAAAGGCTTCAGTCACTTGATGACCTGTTACCTCATGTACGCTTCTCTTTGTTGCCA 2223 Query 1796 TATGAGTTGCTTAAAAGGTTAGAAAACAGCAACCTAAGCAAACAAATCCCAGTATTCAAT 1855 |||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2224 TATGAGTTACTTAAAAGGTTAGAAAACAGCAACCTAAGCAAAGAAATCCCAGTATTCAAT 2283 Query 1856 CGTCTTGTGAATGAGGCTGCTAGCTTCCTAACTTCCGGATTGATATGCCCAGGAAATGAA 1915 |||||| |||| |||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 2284 CGTCTTTTGAAGGAGGCTGCTAGCTTCCTAACATCCGGATTGATATCCCCAGGAAATGAA 2343 Query 1916 CCGATTTCAAGGTTCCAACATCGGAGTTCGAGTTTCAAGGAGCTTCAGTTCATACGTGAT 1975 ||||||||||| |||||||||||||| |||||||||||||||||||||| |||||||||| Sbjct 2344 CCGATTTCAAGATTCCAACATCGGAGATCGAGTTTCAAGGAGCTTCAGTACATACGTGAT 2403 Query 1976 GGGGATAGCAATGGGGTGCTGCACTTTGTGGGTACATCTTATGGTAGTCATCAATGGGTC 2035 ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2404 GGGGACAGCAATGGGGTGCTGCACTTTGTGGGTACATCTTATGGTAGTCATCAGTGGGTC 2463 Query 2036 AACCCCGTTCTTGCAAAGAAAATCATCATTACATCGAGCAGCCCCACCTCCAGATTCACT 2095 ||||||||||| ||||||||||||| |||||||||||| || ||||| |||||||||||| Sbjct 2464 AACCCCGTTCTCGCAAAGAAAATCAACATTACATCGAGTAGTCCCACATCCAGATTCACT 2523 Query 2096 GATCCAAAGGCTTTGGCTTCAAAAACCTATGTGGGTACTTCCTTTGCAGGACCTAGGATG 2155 |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||| Sbjct 2524 GATCCAAAGGCTTTGGCTTCAAAAGCCTATGCGGGTACTTCCTTTGCAGGGCCTAGGATG 2583 Query 2156 GAAGACGGCCATATATCATCCTGGTGGATGGTGGACTTAGGCGAA-AATCATCAGCTTAT 2214 ||||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct 2584 GAAGACGGCCATATATCATCCTGGTGGGTGGTGGACTTAGGCGAAGAA-CATCAGCTTAT 2642 Query 2215 GTGCAACTACTACACCTTCAGACAAGACGGATCAAGAGCATTCACAAGATCCTGGAAGTT 2274 ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 2643 GTGCAACTATTACACCTTCAGACAAGACGGATCAAGAGCATTCACAAGATTCTGGAAGTT 2702 Query 2275 TCAGGGATCGATGGATGGGAAAACATGGACGGACTTGAGAGTTCATGAGGATGACCAGAC 2334 |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| || Sbjct 2703 TCAGGGATCGATGGATGGGAAAACATGGACAGACTTGAGAGTCCATGAGGATGACCAAAC 2762 Query 2335 AATGTGCAAGGCTGGTCAGTTTGCATCATGGCCAATCACAGCAGCAAATGCGTTACTTCC 2394 |||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct 2763 AATGTGCAAGGCCGGTCAGTTTGCATCATGGCCAATCACCGCAGCAAATGCATTACTCCC 2822 Query 2395 CTTTAGGTTTTTCAAGCTGGTTCTGACCGGTCCAACCGCAGACT-CATCAACTCCTTGGA 2453 |||||||||||||| ||||||||||||||||||||| ||||| | |||||||||| |||| Sbjct 2823 CTTTAGGTTTTTCAGGCTGGTTCTGACCGGTCCAACTGCAGA-TACATCAACTCCGTGGA 2881 Query 2454 ACTTTTGCATTTGCTTCCTGGAACTCTATGGTTACTACCGTTGAAGCG-TCTGCAATGAA 2512 ||||||||||||||| | |||| ||||| ||||||| ||||||||||| ||||||||||| Sbjct 2882 ACTTTTGCATTTGCTACTTGGAGCTCTACGGTTACTTCCGTTGAAGCGCTCTGCAATGAA 2941 Query 2513 AATGGCCTTTTGACTGTCTTCTACTACAC--GATTTTCAC-TCTTATCCTGTTTACCTTT 2569 || |||||||||||| ||||||||||| | |||| || | ||||||||||||||||| Sbjct 2942 --TGACCTTTTGACTGT-TTCTACTACACACGTTTTTGACGT-TTATCCTGTTTACCTTT 2997 Query 2570 TGTTCTTGTTCTTGTTCTACAGTGATCTTTGAATCTGAACGTGTTTCTACAAGAAATGTT 2629 ||||||||| || ||||||||||||||| ||||| |||||||| ||| | ||||| Sbjct 2998 TGTTCTTGTACT------ACAGTGATCTTTGAACCTGAAAGTGTTTCT-CAATATATGTT 3050 Query 2630 AAAGTTGATTCCAGTTAGATTGTTTTGATTTTTATGCAAGAGATTCCGGGCTGTGGCTGT 2689 ||| ||||||||||||||||||||||| ||||||| ||||||||| || || ||||||| Sbjct 3051 AAACTTGATTCCAGTTAGATTGTTTTGGTTTTTATACAAGAGATTT-GGCCTATGGCTGT 3109 Query 2690 AGAGTAATGAGTTCTACTTTGTTT 2713 |||||||||||| |||||||||| Sbjct 3110 GGAGTAATGAGTTATACTTTGTTT 3133 > AT2G30615.1 | Symbols: | BEST Arabidopsis thaliana protein match is: F-box and associated interaction domains-containing protein (TAIR:AT2G43445.1); Has 51 Blast hits to 50 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:13041085-13042586 REVERSE LENGTH=1502 Length=1502 Score = 529 bits (286), Expect = 6e-149 Identities = 393/442 (89%), Gaps = 18/442 (4%) Strand=Plus/Minus Query 2277 AGGGATCGATGGATGGGAAAACATGGACGGACTTGAGAGTTCATGAGGATGACCAGACAA 2336 |||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||| Sbjct 1332 AGGGATCGATGGATGGGAAAACATGGACAGACTTGAGAGTCCATGAGGATGACCAAACAA 1273 Query 2337 TGTGCAAGGCTGGTCAGTTTGCATCATGGCCAATCACAGCAGCAAATGCGTTACTTCCCT 2396 |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||| |||| Sbjct 1272 TGTGCAAGGCCGGTCAGTTTGCATCATGGCCAATCACCGCAGCAAATGCATTACTCCCCT 1213 Query 2397 TTAGGTTTTTCAAGCTGGTTCTGACCGGTCCAACCGCAGACT-CATCAACTCCTTGGAAC 2455 |||||||||||| ||||||||||||||||||||| ||||| | |||||||||| |||||| Sbjct 1212 TTAGGTTTTTCAGGCTGGTTCTGACCGGTCCAACTGCAGA-TACATCAACTCCGTGGAAC 1154 Query 2456 TTTTGCATTTGCTTCCTGGAACTCTATGGTTACTACCGTTGAAGCG-TCTGCAATGAAAA 2514 ||||||||||||| | |||| ||||| ||||||| ||||||||||| ||||||||||| Sbjct 1153 TTTTGCATTTGCTACTTGGAGCTCTACGGTTACTTCCGTTGAAGCGCTCTGCAATGAA-- 1096 Query 2515 TGGCCTTTTGACTGTCTTCTACTACAC--GATTTTCAC-TCTTATCCTGTTTACCTTTTG 2571 || |||||||||||| ||||||||||| | |||| || | ||||||||||||||||||| Sbjct 1095 TGACCTTTTGACTGT-TTCTACTACACACGTTTTTGACGT-TTATCCTGTTTACCTTTTG 1038 Query 2572 TTCTTGTTCTTGTTCTACAGTGATCTTTGAATCTGAACGTGTTTCTACAAGAAATGTTAA 2631 ||||||| || ||||||||||||||| ||||| |||||||| ||| | ||||||| Sbjct 1037 TTCTTGTACT------ACAGTGATCTTTGAACCTGAAAGTGTTTCT-CAATATATGTTAA 985 Query 2632 AGTTGATTCCAGTTAGATTGTTTTGATTTTTATGCAAGAGATTCCGGGCTGTGGCTGTAG 2691 | ||||||||||||||||||||||| ||||||| ||||||||| || || ||||||| | Sbjct 984 ACTTGATTCCAGTTAGATTGTTTTGGTTTTTATACAAGAGATTT-GGCCTATGGCTGTGG 926 Query 2692 AGTAATGAGTTCTACTTTGTTT 2713 ||||||||||| |||||||||| Sbjct 925 AGTAATGAGTTATACTTTGTTT 904 Score = 126 bits (68), Expect = 1e-27 Identities = 74/77 (96%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 2207 CAGCTTATGTGCAACTACTACACCTTCAGACAAGACGGATCAAGAGCATTCACAAGATCC 2266 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | Sbjct 1495 CAGCTTATGTGCAACTATTACACCTTCAGACAAGACGGATCAAGAGCATTCACAAGATTC 1436 Query 2267 TGGAAGTTTCAGGGATC 2283 ||||||||||||| ||| Sbjct 1435 TGGAAGTTTCAGGTATC 1419 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 134748408898 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5