BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482018 Length=2279 Score E Sequences producing significant alignments: (Bits) Value AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular proteas... 3738 0.0 AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960058-1... 2193 0.0 > AT2G30950.1 | Symbols: VAR2, FTSH2 | FtsH extracellular protease family | chr2:13174321-13177223 FORWARD LENGTH=2337 Length=2337 Score = 3738 bits (2024), Expect = 0.0 Identities = 2198/2283 (96%), Gaps = 8/2283 (0%) Strand=Plus/Plus Query 1 TCTTTCTCTCCATCTTCCATATTTGCAGAGCTCGAGATTCTCCTTCCTTATACAACTCTC 60 |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| Sbjct 14 TCTTTCTCTCCATCCTCCATATTTGCAGAGCTCGAGATTCTCCTTCCCTATACAACTCTC 73 Query 61 ATCTGTAATCGATACAGATGGCAGCTTCATCAGCTTGTCTTGTGGGAAATGGATTGTCAG 120 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 74 ATCTGTAATCGATACAGATGGCAGCTTCATCAGCTTGTCTTGTGGGAAATGGTTTGTCAG 133 Query 121 TGAACACAACGACCAAACAGAGGTTAAGTAAAAACTTTTCCAGCAGACAGACAAACTTTT 180 |||||||||| ||||||||||||||||||||| | |||||| |||||||||||| ||||| Sbjct 134 TGAACACAACAACCAAACAGAGGTTAAGTAAACATTTTTCCGGCAGACAGACAAGCTTTT 193 Query 181 CTTCAGTGATTAGGACATCTAAGGTTAATGTAGTGAAGGCTTCTTTGGATGTGAAGAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 194 CTTCAGTGATTAGGACATCTAAGGTTAATGTAGTGAAGGCTTCTTTGGATGGGAAGAAGA 253 Query 241 AACATGAAGGAAGAAGAGATTTTCTTAAAATCTTGTTAGGAAATGCCGGGGTCGGTTTGG 300 | || |||||||||||||||||||| |||||||||||||||||||| ||||||||||||| Sbjct 254 AGCAAGAAGGAAGAAGAGATTTTCTCAAAATCTTGTTAGGAAATGCTGGGGTCGGTTTGG 313 Query 301 TTGCAAGTGGGAAAGCAAATTCAGAGGAACAAGCG-GTTTCGTCGTCTAGGATGTCGTAT 359 |||||||||||||||||||| | || ||||||| | ||||| ||||| |||||||||||| Sbjct 314 TTGCAAGTGGGAAAGCAAATGCTGATGAACAAG-GTGTTTCTTCGTCGAGGATGTCGTAT 372 Query 360 TCTAGGTTTCTAGAGTATTTGGATAAGGATAGGGTGAATAAAGTTGATTTGTATGAGAAT 419 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 373 TCTAGGTTTCTAGAGTACTTGGATAAGGATAGGGTGAATAAAGTTGATTTGTATGAGAAT 432 Query 420 GGGACTATAGCTATTGTGGAAGCTGTTTCTCCTGAGTTGGGTAACCGGGTTGAGCGTGTT 479 ||||||||||||||||||||||||||||||||||| |||||||||||||||||| | || Sbjct 433 GGGACTATAGCTATTGTGGAAGCTGTTTCTCCTGAATTGGGTAACCGGGTTGAGAGAGTA 492 Query 480 CGTGTTCAGCTACCGGGATTAAGTCAGGAGCTTCTCCAGAAGCTTAGGGCCAAGAATATT 539 ||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||||||| Sbjct 493 CGTGTTCAGCTACCGGGTTTAAGTCAAGAGCTTCTACAGAAGCTTAGGGCTAAGAATATT 552 Query 540 GATTTTGCAGCACATAATGCTCAGGAAGACCAAGGTTCTGTGTTATTCAACTTGATTGGT 599 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 553 GATTTTGCAGCACATAATGCTCAGGAAGATCAAGGTTCTGTGTTATTCAACTTGATTGGT 612 Query 600 AATCTTGCTTTCCCGTTGCTTTTGATTGGTGGTTTGTTCCTTCTTTCGAGACGCTCTGGT 659 ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||| Sbjct 613 AATCTTGCTTTCCCGGCGCTTTTGATTGGTGGTTTGTTCCTTCTTTCGAGACGGTCTGGT 672 Query 660 GGTGGAATGGGTGGACCTGGTGGTCCTGGTAACCCACTTCAGTTTGGTCAGTCCAAAGCA 719 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 673 GGTGGAATGGGTGGACCTGGTGGTCCTGGTAACCCACTTCAGTTTGGTCAGTCCAAAGCA 732 Query 720 AAGTTCCAAATGGAACCTAACACTGGTGTAACATTTGATGATGTTGCTGGAGTTGATGAA 779 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 733 AAGTTCCAAATGGAACCTAACACTGGTGTAACATTTGATGATGTTGCTGGAGTTGATGAA 792 Query 780 GCAAAGCAGGATTTCATGGAAGTGGTGGAGTTTCTGAAGAAACCCGAGAGATTCACTGCG 839 |||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||| Sbjct 793 GCAAAGCAAGATTTCATGGAAGTGGTGGAGTTTTTGAAGAAACCTGAGAGATTCACTGCG 852 Query 840 GTTGGTGCCAAGATTCCGAAAGGTGTTCTCCTTATTGGTCCCCCTGGTACTGGGAAAACC 899 |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||||||| Sbjct 853 GTTGGTGCCAAGATCCCGAAAGGTGTTCTTCTTATTGGTCCTCCTGGTACCGGGAAAACC 912 Query 900 CTTTTGGCAAAAGCCATTGCTGGTGAAGCTGGTGTGCCTTTCTTCTCCATCTCTGGTTCT 959 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 913 CTTTTGGCAAAAGCCATTGCTGGTGAAGCTGGTGTGCCTTTCTTCTCCATCTCTGGTTCT 972 Query 960 GAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCCTCAAGAGTCCGTGATCTTTTCAAGAAA 1019 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 973 GAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCCTCGAGAGTCCGTGATCTTTTCAAGAAA 1032 Query 1020 GCCAAGGAGAACGCTCCTTGCATTGTCTTTGTAGATGAAATAGATGCTGTTGGTAGGCAA 1079 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1033 GCCAAGGAGAACGCTCCTTGCATTGTCTTTGTAGATGAAATAGATGCTGTTGGTAGGCAA 1092 Query 1080 AGAGGAACCGGAATTGGTGGAGGTAATGATGAAAGAGAACAGACCCTCAATCAGCTCCTA 1139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1093 AGAGGAACCGGAATTGGTGGAGGTAATGATGAAAGAGAACAGACCCTCAATCAGCTCCTA 1152 Query 1140 ACTGAGATGGATGGTTTTGAAGGTAACACTGGTGTTATCGTAGTTGCTGCAACCAATAGA 1199 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1153 ACTGAGATGGATGGTTTTGAAGGTAACACTGGTGTTATCGTAGTTGCTGCAACCAATAGA 1212 Query 1200 GCAGACATTCTTGATTCTGCTTTGTTGAGGCCAGGACGGTTTGACCGGCAGGTAAGTGTT 1259 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 GCAGACATTCTTGACTCTGCTTTGTTGAGGCCAGGACGGTTTGACCGGCAGGTAAGTGTT 1272 Query 1260 GACGTTCCAGACGTTAAGGGGAGAACAGATATTCTCAAGGTTCATGCCGGTAATAAGAAG 1319 |||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 1273 GACGTTCCTGACGTTAAGGGGAGAACAGATATTCTCAAGGTTCATGCCGGCAATAAGAAG 1332 Query 1320 TTCGACAATGATGTCTCACTTGAAATAATAGCAATGAGAACACCCGGATTTAGCGGAGCA 1379 |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 1333 TTCGACAATGATGTTTCACTTGAAATAATAGCAATGAGAACACCTGGATTTAGCGGAGCA 1392 Query 1380 GATCTCGCTAACCTCTTGAATGAAGCTGCTATATTGGCCGGAAGGCGAGCGCGGACGTCG 1439 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||| Sbjct 1393 GATCTCGCTAACCTCTTGAATGAGGCTGCTATATTGGCCGGAAGGCGAGCACGGACATCG 1452 Query 1440 ATATCATCTAAAGAGATTGATGACTCCATTGATAGAATAGTTGCTGGCATGGAAGGAACA 1499 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 1453 ATATCATCTAAAGAGATTGATGACTCCATTGATAGAATCGTTGCTGGCATGGAAGGAACA 1512 Query 1500 GTGATGACCGACGGGAAGAGCAAAAGCTTGGTTGCTTACCATGAAGTTGGTCATGCAGTG 1559 ||||||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 1513 GTGATGACCGATGGCAAGAGCAAAAGCTTGGTAGCTTACCATGAAGTTGGTCATGCAGTG 1572 Query 1560 TGTGGAACATTGACTCCAGGACATGATGCTGTGCAAAAGGTAACGTTGATACCAAGAGGC 1619 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1573 TGTGGAACATTGACTCCAGGACATGATGCTGTGCAAAAGGTAACGTTGATACCAAGAGGC 1632 Query 1620 CAAGCAAGAGGTCTGACTTGGTTCATTCCGTCAGATGACCCGACACTCATCTCCAAGCAA 1679 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1633 CAAGCAAGAGGTCTGACTTGGTTCATTCCATCAGATGACCCGACACTCATCTCCAAGCAG 1692 Query 1680 CAACTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTCGAGCCGCTGAAGAAATCATCTTT 1739 |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| Sbjct 1693 CAACTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAGGGCCGCTGAAGAAATCATCTTT 1752 Query 1740 GGTGAG-CCTGAGGTGACTACTGGCGCAGTTGGTGACTTGCAACAGATCACCGGTTTGGC 1798 ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1753 GGTGATTCC-GAGGTGACTACTGGCGCAGTTGGTGACTTACAACAGATCACCGGTTTGGC 1811 Query 1799 TAGACAGATGGTAACAACATTTGGAATGTCTGATATTGGACCATGGTCGTTGATGGATTC 1858 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1812 TAGACAGATGGTAACAACATTTGGAATGTCTGATATTGGACCATGGTCTTTGATGGATTC 1871 Query 1859 ATCAGCACAAAGTGATGTCATCATGAGAATGATGGCAAGAAACTCCATGTCTGAGAAGCT 1918 || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1872 TTCGGCACAAAGCGATGTCATCATGAGAATGATGGCAAGAAACTCCATGTCTGAGAAGCT 1931 Query 1919 TGCAGAAGACATTGATTCTGCAGTGAAGAAACTATCCGACAGTGCATATGAGATAGCTCT 1978 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| Sbjct 1932 TGCAGAAGACATTGATTCTGCGGTGAAGAAACTATCAGACAGTGCATATGAGATAGCTCT 1991 Query 1979 AAGCCACATAAGGAACAATCGTGAAGCCATGGATAAGCTCGTTGAAGTGCTTCTCGAGAA 2038 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1992 AAGCCACATAAAGAACAATCGTGAAGCCATGGATAAGCTCGTTGAAGTGCTTCTCGAGAA 2051 Query 2039 AGAAACAATTGGCGGTGACGAATTCAGGGCAATTCTTTCTGAGTTTACTGAAATCCCACC 2098 |||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| || Sbjct 2052 AGAAACTATTGGCGGTGACGAATTCAGGGCAATTCTTTCCGAGTTTACTGAGATCCCCCC 2111 Query 2099 AGAAAATCGGGTTCCTTCTTCAACAAC-ATCAACTCCAGCATCAGCACCAACACCAGCTT 2157 ||||| || ||||||||||||||||| | ||||||||||||||||||||||||||||| Sbjct 2112 GGAAAACCGAGTTCCTTCTTCAACAACGA-CAACTCCAGCATCAGCACCAACACCAGCTG 2170 Query 2158 CCGTCTAAGTAAGAAATTTGTATACTTGTGATACTTATAATTTTTCTGTAAATTTATCTG 2217 | |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 2171 CTGTCTAAGTAATCAATCTGTATACTTGTGATACTTATAATTTTTCTGTAAATTTATCT- 2229 Query 2218 TCAAACTTACACTCTAGAAATGTGATACTATCTCAAAATTTAGTAGCAAGTAAATGTT-A 2276 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | Sbjct 2230 TCAAACTTACACTCTAGAAATGTGATACTATCTCAAAATTTAGTAACAAGTAAATGTTTA 2289 Query 2277 AAA 2279 ||| Sbjct 2290 AAA 2292 > AT1G06430.1 | Symbols: FTSH8 | FTSH protease 8 | chr1:1960058-1963011 REVERSE LENGTH=2255 Length=2255 Score = 2193 bits (1187), Expect = 0.0 Identities = 1770/2044 (87%), Gaps = 69/2044 (3%) Strand=Plus/Plus Query 187 TGATTAGGACATCTAAGGTTA-ATGTAGTGAAGGCTTCTTTGGATGTGAAGAAGAAACAT 245 ||| |||||||||||| |||| | || ||||||||||||||||| || ||||||||||| Sbjct 122 TGA-TAGGACATCTAAAGTTACA-GTTGTGAAGGCTTCTTTGGA--TG-AGAAGAAACAT 176 Query 246 GAAGGAAGAAGAGATTTTC-TTAAAATCTTGTTAGGAAA---TGC--C-GGGGTCGGTTT 298 ||||| ||||||| |||| ||||| |||| ||||||| ||| | || || ||||| Sbjct 177 GAAGGGAGAAGAG-GTTTCTTTAAACTCTTACTAGGAAACGCTGCTGCTGGAGTTGGTTT 235 Query 299 GGTTGCAAGTGGGAAA-GCAAATTCAGAGGAACAA-G-C----GGTTTCGTCGTCTAGGA 351 | |||||||| ||||| || ||| |||| |||||| | | |||||| |||||||| | Sbjct 236 GCTTGCAAGT-GGAAACGCTAATGCAGACGAACAAGGACAAGGGGTTTCTTCGTCTAGAA 294 Query 352 TGTCGTATTCTAGGTTTCTAGAGTATTTGGATAA-GGATAGGG-TGAATAAAGTTGATTT 409 |||| ||||||||||| ||||||||||| || || ||| |||| || | ||||| ||||| Sbjct 295 TGTCTTATTCTAGGTTCCTAGAGTATTTAGACAAGGGA-AGGGTTG-AGAAAGTAGATTT 352 Query 410 GTATGAGAATGGGACTATAGCTATTGTGGAAGCTGTTTCTCCTGAGTTGGGTAACCGGGT 469 |||||||||||||||||||||||||||||| || |||||||||||||||||||||||| | Sbjct 353 GTATGAGAATGGGACTATAGCTATTGTGGAGGCCGTTTCTCCTGAGTTGGGTAACCGGAT 412 Query 470 TGAGCGTGTTCGTGTTCAGCTACCGGGATTAAGTCAGGAGCTTCTCCAGAAGCTT-AGGG 528 | ||||||| ||||| |||||||| ||||| ||||||||||||||||||||| || |||| Sbjct 413 TCAGCGTGTACGTGTGCAGCTACCTGGATTGAGTCAGGAGCTTCTCCAGAAG-TTGAGGG 471 Query 529 CCAAGAATATTGATTTTGCAGCACATAATGCTCAGGAAGACCAAGGTTCTGTGTTATTCA 588 | |||||||||||||| |||||||||||||||||||| |||||||||||| || ||| Sbjct 472 CTAAGAATATTGATTTCGCAGCACATAATGCTCAGGAGGACCAAGGTTCTCCAATACTCA 531 Query 589 ACTTGATTGGTAATCTTGCTTTCCC-GTTGCTTTTGATTGGTGGTTTGTTCCTTCTTTCG 647 |||||||||| |||||||| ||||| ||| |||||||||| |||||||||||||| ||| Sbjct 532 ACTTGATTGGGAATCTTGCATTCCCTGTT-ATTTTGATTGGCGGTTTGTTCCTTCTCTCG 590 Query 648 AGACGCT-CTGGTGGTGGAATGGGTGGACCTGGTGGTCCTGG-TAACCCACTTCAGTTTG 705 ||| | | || ||||||||||||||| |||||||||||||| | |||||| || ||| Sbjct 591 AGAAGATCCT-CTGGTGGAATGGGTGGCCCTGGTGGTCCTGGCT-TCCCACTCCAAATTG 648 Query 706 GTCAGTCCAAAGCAAAGTTCCAAATGGAACCTAACACTGGTGTAACATTTGATGATGTTG 765 ||||||| ||||||||||| || |||||||| |||||||||||||| ||||||||||||| Sbjct 649 GTCAGTCGAAAGCAAAGTTTCAGATGGAACCAAACACTGGTGTAACTTTTGATGATGTTG 708 Query 766 CTGGAGTTGATGAAGCAAAGCAGGATTTCATGGAAGTGGTGGAGTTTCTGAAGAAACCCG 825 ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| || | Sbjct 709 CTGGAGTCGATGAAGCCAAGCAAGATTTCATGGAAGTGGTGGAGTTTCTGAAGAAGCCTG 768 Query 826 AGAGATTCACTGCGGTTGGTGCCAAGATTCCGAAAGGTGTTCTCCTTATTGGTCCCCCTG 885 |||| |||||||||||||||||| ||| || ||||||||||| ||| ||||||| |||| Sbjct 769 AGAGGTTCACTGCGGTTGGTGCCCGGATCCCAAAAGGTGTTCTTCTTGTTGGTCCTCCTG 828 Query 886 GTACTGGGAAAACCCTTTTGGCAAAAGCCATTGCTGGTGAAGCTGGTGTGCCTTTCTTCT 945 |||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||||| | Sbjct 829 GTACCGGGAAAACCCTGTTGGCAAAAGCCATTGCTGGTGAAGCTGGTGTGCCCTTCTTTT 888 Query 946 CCATCTCTGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCCTCAAGAGTCCGTG 1005 ||||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||| | Sbjct 889 CCATCTCGGGTTCTGAGTTTGTTGAGATGTTTGTCGGTGTTGGTGCATCAAGGGTCCGCG 948 Query 1006 ATCTTTTCAAGAAAGCCAAGGAGAACGCTCCTTGCATTGTCTTT-GTAGATGAAATAGAT 1064 |||||||||| |||||||| || || ||||| |||||||| ||| || |||||||||||| Sbjct 949 ATCTTTTCAAAAAAGCCAAAGAAAATGCTCCATGCATTGT-TTTCGTGGATGAAATAGAT 1007 Query 1065 GCTGTTGGTAGGCAAAGAGGAACCGGAATTGGTGGAGGTAATGATGAAAGAGAACAGACC 1124 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1008 GCTGTTGGTAGGCAAAGAGGAACTGGAATTGGTGGAGGTAATGATGAAAGAGAACAGACC 1067 Query 1125 CTCAATCAGCTCCTAACTGAGATGGATGGTTTTGAAGGTAACACTGGTGTTATCGTAGTT 1184 || ||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1068 CTTAATCAGCTCCTGACTGAGATGGATGGTTTTGAGGGTAACACTGGTGTTATCGTAGTT 1127 Query 1185 GCTGCAACCAATAGAGCAGACATTCTTGATTCTGCTTTGTTGAGGCCAGGACGGTTTGAC 1244 ||||||||||| ||||||||||||||||| || |||||| | || ||||| || |||||| Sbjct 1128 GCTGCAACCAACAGAGCAGACATTCTTGACTCCGCTTTGCTAAGACCAGGGCGTTTTGAC 1187 Query 1245 CGGCAGGTAAGTGTTGACGTTCCAGACGTTAAGGGGAGAACAGATATTCTCAAGGTTCA- 1303 ||||||||| |||||||||||||||||||||||| ||||||||||| ||||||||||| Sbjct 1188 CGGCAGGTATCTGTTGACGTTCCAGACGTTAAGGGAAGAACAGATATACTCAAGGTTCAC 1247 Query 1304 TGCCGGTAATAAGAAGTTCGACAAT-GATGTCTCACTTGAAATAATAGCAATGAGAACAC 1362 | | || |||||||| || || || | ||| ||||||||| ||||||| |||||||||| Sbjct 1248 T-CGGGGAATAAGAAATTTGA-AAGCGGTGTTTCACTTGAAGTAATAGCCATGAGAACAC 1305 Query 1363 CCGGATTTAGCGGAGCAGATCTCGCTAACCTCTTGAATGAAGCTGCTATATTGGCCGGAA 1422 | |||||||||||||| ||||| || ||||||||||| || ||||| ||||||||||| Sbjct 1306 CTGGATTTAGCGGAGCTGATCTTGCAAACCTCTTGAACGAGGCTGCCATATTGGCCGGCC 1365 Query 1423 GGCGAGCGCG-GAC-GTCGATATCATCTAAAGAGATTGATGACTCCATTGATAGAATAGT 1480 | || | | ||| | | |||||||| ||||||||||||||||| ||||| ||||| || Sbjct 1366 GCCGTG-GAAAGACTG-CAATATCATCAAAAGAGATTGATGACTCAATTGACAGAATTGT 1423 Query 1481 TGCTGGCATGGAAGGAACAGTGATGACCGACGGGAAGAGCAAAAGCTTGGTTGCTTACCA 1540 |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| Sbjct 1424 AGCTGGCATGGAAGGAACAGTCATGACAGATGGGAAGAGCAAAAGCTTGGTTGCTTACCA 1483 Query 1541 TGAAGTTGGTCATGC-AGTGTGTGGAACATTGACTCCAGGACATGATGCTGTGCAAAAGG 1599 ||||||||| ||||| | | |||||||||||||||||||| ||||||||||| ||||||| Sbjct 1484 TGAAGTTGGCCATGCCA-TATGTGGAACATTGACTCCAGGGCATGATGCTGTTCAAAAGG 1542 Query 1600 TAACGTTGATACCAAGAGGCCAAGCAAGAGGTCTGACTTGGTTCATTCCGTCAGATGACC 1659 | |||||||||||| ||||||| || ||||||||||||||||||||||| |||||||||| Sbjct 1543 TCACGTTGATACCACGAGGCCAGGCTAGAGGTCTGACTTGGTTCATTCCCTCAGATGACC 1602 Query 1660 CGACACTCATCTCCAAGCAACAACTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTCGAG 1719 | || || |||||||| || |||||||||||||||||||||||||||||||||||| ||| Sbjct 1603 CAACTCTAATCTCCAAACAGCAACTCTTTGCAAGAATTGTTGGTGGACTCGGTGGTAGAG 1662 Query 1720 CCGCTGAAGAAATCATCTTTGGTGAGCCTGAGGTGACTACTGGCGCAGTTGGTGACTTGC 1779 | || |||||| |||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct 1663 CTGCCGAAGAAGTCATCTTTGGTGAGTCTGAGGTGACTACTGGTGCAGTTAGTGACTTGC 1722 Query 1780 AACAGATCACCGGTTTGGCTA-GACAGATGGTAACAACATTTGGAATGTCTGATATTGGA 1838 ||||||||||||||||||||| | |||||||| ||||||||||| |||||||| || ||| Sbjct 1723 AACAGATCACCGGTTTGGCTAAG-CAGATGGTGACAACATTTGGGATGTCTGAAATCGGA 1781 Query 1839 CCATGGTCGTTGATGGATTCATCAGCA-CAAAGTGATGTCATCATGAGAATGATGGCAAG 1897 ||||||||| | ||||||||||| | | ||||| |||||||| ||||| ||||||||||| Sbjct 1782 CCATGGTCGCTAATGGATTCATCGG-AGCAAAGCGATGTCATTATGAGGATGATGGCAAG 1840 Query 1898 AAACTCCATGTCTGAGAAGCTTGCAGAA-GACATTGATTCTGCAGTGAAGAAACTATCCG 1956 |||||| |||||||||||||||||| || || |||||| | || ||||||| | |||| | Sbjct 1841 AAACTCAATGTCTGAGAAGCTTGCA-AATGATATTGATACAGCGGTGAAGACATTATCAG 1899 Query 1957 ACAGTGCATATGAGATAGCTCTAAGCCACATAAGGAACAATCGTGAAGCCATGGATAAGC 2016 ||| || || ||||||||| | ||||| || || |||||||||||||||||||| ||| Sbjct 1900 ACAAAGCGTACGAGATAGCTTTGAGCCAGATTAGAAACAATCGTGAAGCCATGGACAAGA 1959 Query 2017 TCGTTGAAGTGCTTCTCGAGAAAGAAACAATTGGC-GGTGACGAATTCAGGGCAATTCTT 2075 | |||||| | ||||| |||||||| || || | | || || |||||| | ||||| || Sbjct 1960 TTGTTGAAATACTTCTTGAGAAAGAGACTAT-GTCAGGCGATGAATTCCGAGCAATCCTA 2018 Query 2076 TCTGAGTTTACTGAAATCCCACCAGAAAATCGGGTTCCTTCTTCAACAACATCAACTCCA 2135 ||||| || || ||||||||||| ||||| || ||| ||||||||||| || | | Sbjct 2019 TCTGAATTCACAGAAATCCCACCTGAAAACCGTGTTGCTTCTTCAACA---TC--C---A 2070 Query 2136 GCATCAGCACCAACACCAGCTTCCGTCTAAGTAAGAAA--TTTGTATACT-TGTG-ATAC 2191 ||||| ||||||||||||| || |||| ||||||| | |||| || || |||| ||| Sbjct 2071 -CATCAACACCAACACCAGCGTCTGTCTGAGTAAGAGACCTTTGAAT-CTCTGTGTATA- 2127 Query 2192 TTAT 2195 |||| Sbjct 2128 TTAT 2131 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 113101827885 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5