BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482175 Length=1541 Score E Sequences producing significant alignments: (Bits) Value AT2G32480.1 | Symbols: ARASP | ARABIDOPSIS SERIN PROTEASE | chr... 2431 0.0 AT2G32470.1 | Symbols: | F-box associated ubiquitination effec... 617 7e-176 > AT2G32480.1 | Symbols: ARASP | ARABIDOPSIS SERIN PROTEASE | chr2:13788517-13790073 REVERSE LENGTH=1557 Length=1557 Score = 2431 bits (1316), Expect = 0.0 Identities = 1480/1557 (95%), Gaps = 20/1557 (1%) Strand=Plus/Plus Query 1 AATCGTACCACTTCACCGTAGTACTCCAAAACCTCCGCTTC-CACGAAACAATGCTATTA 59 ||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||| Sbjct 1 AATCGTACCACTTCACCGTAGTACTCCAAAATCTCCACTTCTCACGAAACAATGCTATTA 60 Query 60 AACATTTCTTCTTCTCCAATCTCTCATCGAAACCCTCA----CT-T-C---TTCAACAAC 110 |||||||||||||||||||||||||||||||||||||| || | | ||||||||| Sbjct 61 AACATTTCTTCTTCTCCAATCTCTCATCGAAACCCTCACTTCCTCTCCAATTTCAACAAC 120 Query 111 CCCATCTCTTATTTCCCTCGGCGATCCAAAACCCATCTCTCAAAATCTCATCTTTTCCCC 170 |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| Sbjct 121 CCCATCTCTTATTTCCCTCGACGATCCAAAACCCATCTCTCAAAATCTCATTTTTTCCCC 180 Query 171 AAGTTCACTCCTTTATCGAACCAGAGTCTCAAAAACAGAGTCTTGTTCGGAAACAAGAGG 230 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 181 AAGTTCACTCCTTTATCCAACCAAAGTCTCAAAAACAGAGTCTTGTTCGGAAACAAGAGG 240 Query 231 TGCCCAGATGGAGAAAGGTTTGATTTTAGGGCAAGAGCAATCTCCGGGATTGATTTGGGA 290 | ||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||| Sbjct 241 TACCCAGATGGAGAAAGGTTTGATTTTAGATCAAGAGCTATCTCCGGGATTGATTTGGGA 300 Query 291 AGCTTTGAATCTGTTCTTGAAGCTATTGCTGTTCTCACTACGATCATCGTTGTTCACGAA 350 |||||||||||||||||||||||||||||||||||||| ||||||||||| || || ||| Sbjct 301 AGCTTTGAATCTGTTCTTGAAGCTATTGCTGTTCTCACAACGATCATCGTCGTCCATGAA 360 Query 351 TCAGGTCATTTCCTAGCGGCTTCTCTTCAAGGGATCCATGTGAGTAAATTCGCAATTGGG 410 |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 361 TCAGGTCATTTCCTTGCGGCTTCTCTCCAAGGGATCCATGTGAGTAAATTCGCAATTGGG 420 Query 411 TTTGGTCCGATTCTAGCTAAGTTCGATTACAACAATGTTGAGTATTCGCTTAGGGCTTTT 470 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 421 TTTGGTCCGATTCTAGCTAAGTTCGATTACAACAATGTTGAGTATTCGCTTAGGGCTTTT 480 Query 471 CCTTTAGGTGGGTTTGTTGGTTTCCCTGATAATGATCCTGACAGTGAGATTCCTATTGAT 530 |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| Sbjct 481 CCTTTAGGTGGGTTTGTTGGTTTCCCTGATAATGATCCAGATAGTGAGATTCCTATTGAC 540 Query 531 GATGAGAATCTGCTTAAGAACAGACCAACTTTAGACAGATCGATTGTTGTTTCAGCTGGA 590 ||||||||||| |||||||||||||||||| |||| ||||| |||||||||||||||||| Sbjct 541 GATGAGAATCTTCTTAAGAACAGACCAACTCTAGATAGATCAATTGTTGTTTCAGCTGGA 600 Query 591 ATTATCGCCAATGTGATCTTTGCTTACGCTATAATCTTTGTTCAAGTGCTATCTGTTGGT 650 |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| Sbjct 601 ATTATCGCCAATGTGATCTTTGCTTATGCTATAATCTTTGTTCAAGTGTTATCTGTTGGT 660 Query 651 TTGCCTGTACAAGAAGCGTTTCCTGGTGTTCTTGTTCCTGAAGTTAAGACCTTTTCTGCT 710 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 661 TTACCTGTACAAGAAGCGTTTCCTGGTGTTCTTGTTCCTGAAGTTAAGACCTTTTCTGCT 720 Query 711 GCTTCTCGTGATGGATTGCTTTCGGGTGATGTAA-TCATCGCTGTGGACGGTGCTCAGCT 769 |||||||||||||| |||||||| |||||||||| || |||||||||||||| || |||| Sbjct 721 GCTTCTCGTGATGGGTTGCTTTCTGGTGATGTAATTC-TCGCTGTGGACGGTACTGAGCT 779 Query 770 GTCTAAAACCGGGCCTGACGCTGTTTCCAAGATTGTTGACATTGTCAAAAGAAACCCGAA 829 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct 780 GTCTAAAACCGGGCCTGACGCTGTTTCGAAGATTGTTGACATTGTTAAAAGAAACCCGAA 839 Query 830 GAGTGATGTGTTGTTTAAG-GTCGAGAGAGGGAATAAAGATTTCGATATTCGGGTAACAC 888 |||| ||||| ||||| || |||| |||||| | ||||||||||||||||||| |||| Sbjct 840 GAGTAATGTGGTGTTT-AGAATCGAAAGAGGGGGTGAAGATTTCGATATTCGGGTTACAC 898 Query 889 CGGATAAGAACTTTGATGGGACGGGGAAGATTGGTGTTCAGTTGTCTCCAAATGTTAGAA 948 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 899 CGGATAAGAACTTTGATGGGACGGGGAAGATCGGTGTTCAGTTGTCTCCAAATGTTAGAA 958 Query 949 TCACTAAGGTGAGACCGAGGAACATTCCGGAAACGTTTAGATTCGTGGGAAGGGAGTTTA 1008 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 959 TCACTAAGGTGAGACCGAGGAACATTCCGGAAACGTTTAGATTTGTGGGAAGGGAGTTTA 1018 Query 1009 TGGGGCTATCGTCTAATGTTTTGGATGGTCTAAAACAAACGTTCTTCAACTTTTCTCAAA 1068 |||||||||| |||||||||||||| ||| |||||||||| ||||| ||||| ||||| | Sbjct 1019 TGGGGCTATCTTCTAATGTTTTGGACGGTTTAAAACAAACATTCTTTAACTTCTCTCAGA 1078 Query 1069 CTGCAAGTAAAGTAGCAGGTCCTGTGGCAATTATTGCAGTGGGAGCAGAAGTGGCAAGAT 1128 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1079 CAGCAAGTAAAGTAGCAGGTCCTGTGGCAATTATTGCAGTGGGAGCAGAAGTGGCAAGAT 1138 Query 1129 CAAATATCGACGGGCTTTACCAATTCGCAGCGTTGCTGAATATCAACCTTGCGGTGATCA 1188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1139 CAAATATCGACGGGCTTTACCAATTCGCAGCGTTGCTGAATATCAACCTTGCGGTGATCA 1198 Query 1189 ATCTCTTGCCATTACCGGCTCTTGACGGTGGAACTTTGGCATTGATATTGTTGGAAGCTG 1248 |||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 1199 ATCTCTTGCCGTTACCGGCTCTTGACGGTGGAACATTGGCATTGATATTGTTGGAAGCTG 1258 Query 1249 TTAGAGGAGGGAAGAAGCTTCCTGTAGAGGTAGAACAAGGGATAATGTCTTCAGGGATCA 1308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1259 TTAGAGGAGGGAAGAAGCTTCCTGTAGAGGTAGAACAAGGGATAATGTCTTCAGGGATCA 1318 Query 1309 TGCTTGTGATATTCCTTGGATTGTTTCTCATCGTTAAGGACACACTTAGCCTTGATTTTA 1368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1319 TGCTTGTGATATTCCTTGGATTGTTTCTCATCGTTAAGGACACACTTAGCCTTGATTTCA 1378 Query 1369 TCAAAGAAATGTTGTAGTTATCTCTTTGAGGAGGAAGAGAGAAACTTTAGTGTGAAGAGG 1428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1379 TCAAAGAAATGTTGTAGTTATCTCTTTGAGGAGGAAGAGAGAAACTTTAGTGTGAAGAGG 1438 Query 1429 TTGAGAGTTTAGATCAAATTTGGTTATCCAACACAAACACATGGTGATGAATTTATGGTA 1488 ||||||||||||| ||||||||| ||||||||||||| | ||||||||||||||||||| Sbjct 1439 TTGAGAGTTTAGAACAAATTTGGCTATCCAACACAAAGA--TGGTGATGAATTTATGGTA 1496 Query 1489 CATA--T-T-CATGTAATAGTTCTACTCTTGTTATCCATTATAAAAGATGTGTTTGT 1541 |||| | | ||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1497 CATACATATTCATGTAATAGTTCTACTCTTGTTATCCCTTATAAAAGATGTGTTTGT 1553 > AT2G32470.1 | Symbols: | F-box associated ubiquitination effector family protein | chr2:13787172-13788894 FORWARD LENGTH=1723 Length=1723 Score = 617 bits (334), Expect = 7e-176 Identities = 363/376 (97%), Gaps = 6/376 (2%) Strand=Plus/Minus Query 1170 ATCAACCTTGCGGTGATCAATCTCTTGCCATTACCGGCTCTTGACGGTGGAACTTTGGCA 1229 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 1723 ATCAACCTTGCGGTGATCAATCTCTTGCCGTTACCGGCTCTTGACGGTGGAACATTGGCA 1664 Query 1230 TTGATATTGTTGGAAGCTGTTAGAGGAGGGAAGAAGCTTCCTGTAGAGGTAGAACAAGGG 1289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1663 TTGATATTGTTGGAAGCTGTTAGAGGAGGGAAGAAGCTTCCTGTAGAGGTAGAACAAGGG 1604 Query 1290 ATAATGTCTTCAGGGATCATGCTTGTGATATTCCTTGGATTGTTTCTCATCGTTAAGGAC 1349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1603 ATAATGTCTTCAGGGATCATGCTTGTGATATTCCTTGGATTGTTTCTCATCGTTAAGGAC 1544 Query 1350 ACACTTAGCCTTGATTTTATCAAAGAAATGTTGTAGTTATCTCTTTGAGGAGGAAGAGAG 1409 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 1543 ACACTTAGCCTTGATTTCATCAAAGAAATGTTGTAGTTATCTCTTTGAGGAGGAAGAGAG 1484 Query 1410 AAACTTTAGTGTGAAGAGGTTGAGAGTTTAGATCAAATTTGGTTATCCAACACAAACACA 1469 |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| | Sbjct 1483 AAACTTTAGTGTGAAGAGGTTGAGAGTTTAGAACAAATTTGGCTATCCAACACAAAGA-- 1426 Query 1470 TGGTGATGAATTTATGGTACATA--T-T-CATGTAATAGTTCTACTCTTGTTATCCATTA 1525 ||||||||||||||||||||||| | | ||||||||||||||||||||||||||| ||| Sbjct 1425 TGGTGATGAATTTATGGTACATACATATTCATGTAATAGTTCTACTCTTGTTATCCCTTA 1366 Query 1526 TAAAAGATGTGTTTGT 1541 |||||||||||||||| Sbjct 1365 TAAAAGATGTGTTTGT 1350 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76053825675 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5