BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482529
Length=1423
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35660.1 | Symbols: CTF2A | FAD/NAD(P)-binding oxidoreductas... 2178 0.0
AT2G29720.1 | Symbols: CTF2B | FAD/NAD(P)-binding oxidoreductas... 1644 0.0
> AT2G35660.1 | Symbols: CTF2A | FAD/NAD(P)-binding oxidoreductase
family protein | chr2:14988447-14990426 FORWARD LENGTH=1478
Length=1478
Score = 2178 bits (1179), Expect = 0.0
Identities = 1357/1441 (94%), Gaps = 20/1441 (1%)
Strand=Plus/Plus
Query 1 ACACGGTCGTGGCCATGTCCGTTCTGCTTCCGATCTATCCTCTCCAATCCTTAGGCCA-A 59
||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| |
Sbjct 39 ACACGGTCGTGGCCATGTCTGTTCTGCTTCCGATGTATCCTCTCCAATCCTT-GGCCAGA 97
Query 60 AGCAACAGATGGTTCCCGGTTCGAACCAGATCAAAACCGGTGTGTTTAGCACTGACCAAT 119
||||| |||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 98 AGCAAGAGATTGTTTCCGATTCGAACCAGATCAAAACCGGTTTGTTTAGCACTGACCAAT 157
Query 120 GCTCAAACAAACGGTGGTGACCAAGAGGAGAATGTAGTGATTGTTGGCGCCGGGATTGGC 179
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 158 GCTCAAACAAACGGTGGTGACCAAGAGGAGAAAGTAGTGATTGTTGGCGCCGGGATTGGC 217
Query 180 GGACTTACCACCGCCGTTTCTCTTCACCGGCTAGGAATCCGGTCGGTGGTGTTGGAGCAG 239
|||||| |||| |||||||| |||||| |||| |||||||||||||||||||||||||||
Sbjct 218 GGACTTGCCACTGCCGTTTCACTTCACAGGCTTGGAATCCGGTCGGTGGTGTTGGAGCAG 277
Query 240 GCAGAGTCGCTTCGGACCGGAGGAACATCGCTGACCCTATTCAAGAATGGGTGGCGCGTT 299
|||||||||||||| || || |||||||| ||||| ||||||||||||||||||||||||
Sbjct 278 GCAGAGTCGCTTCGTACTGGTGGAACATCACTGACGCTATTCAAGAATGGGTGGCGCGTT 337
Query 300 CTTGATGCCATCTCCGTCGGGCCTCAACTCCGACCGCAGTTTCTTGAAATCGAAGGGATG 359
||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 338 CTTGACGCCATTTCCGTCGGGCCTCAACTCCGAACGCAGTTTCTTGAAATCGAAGGGATG 397
Query 360 GTAGTGAAGAAGGAAGATGGAAGAGAGCTTCGCTCTTTCAAATTCAAAGACGAAGATCAA 419
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 398 GTAGTGAAGAAGGAAGATGGAAGAGAGCTTCGTTCTTTCAAATTCAAAGACGATGATCAA 457
Query 420 AGCCAAGAAGTTCGGGCCGTGGAGAGGCGAGTACTCTTGGAAACACTTGCAAGCCAGCTT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 AGCCAAGAAGTTCGGGCCGTGGAGAGGCGAGTACTCTTGGAAACACTTGCAAGCCAGCTT 517
Query 480 CCTCCAGAAACCATTCGGTTCTCCTCAAAACTGGAAAGTATACAAAGCAATGCCAATGGT 539
|||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 518 CCTCCACAAACCATTCGGTTTTCCTCAAAACTGGAAAGTATACAAAGCAATGCCAATGGT 577
Query 540 GACACTCTCCTTCAACTTGGAGATGGAACCCGGTTGCTTGCAAAGATTGTTATTGGTTGT 599
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 578 GACACTCTCCTTCAACTTGGAGATGGAACCCGGTTGCTTGCACAGATTGTTATTGGTTGT 637
Query 600 GATGGTATCCGGTCTAAGGTTGCAACTTGGATGGGGTTCAGTGAGCCGAAATATGTTGGT 659
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 638 GACGGTATCCGGTCTAAGGTTGCAACTTGGATGGGGTTCAGTGAGCCGAAATATGTTGGC 697
Query 660 CATTGCGCTTTCCGTGGCCTCGGGTTCTTTCCAAATGGGCAGCCATTTCAGAACAAGGTG 719
|||||||||| |||||| || ||||||| ||||||||| |||||||||||||| ||||||
Sbjct 698 CATTGCGCTTACCGTGGTCTTGGGTTCTATCCAAATGGACAGCCATTTCAGAAAAAGGTG 757
Query 720 AACTACATATACGGGAAAGGGCTTAGAGCTGGATATGTACCTGTATCTGCAACAAAAGTC 779
|||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 758 AACTACATATACGGTAAAGGGATTAGAGCTGGATATGTACCTGTATCTACAACAAAAGTC 817
Query 780 TACTGGTTCATCTGTTTCAACAGGCCATCACTAGGGCCCAAAATTACGGATCCAGCTATC 839
||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |||
Sbjct 818 TACTGGTTCATCTGTTTCAACAGCCCATCTCTAGGGCCCAAAATTACGGATCCAGCGATC 877
Query 840 CTaaaaaaaCAAGCCAAAGAACTTGTTAGTACCTGGCCAGAAGATCTGCAAAACCTCATC 899
||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 878 CTAAAAAAACAAGCCAAAGAACTGGTTAGTACATGGCCAGAAGATCTGCAAAACCTCATC 937
Query 900 GATCTAACACCTGATGAAACCATCAGCAGAACTCCTCTTGTAGACCGGTGGCTTTGGCCA 959
||| |||||||||||||||| ||||||||||||||||| |||||||||||||| |||||
Sbjct 938 GATTTAACACCTGATGAAACTATCAGCAGAACTCCTCTAGTAGACCGGTGGCTATGGCCT 997
Query 960 GGCATTGCTCCTCCAGCATCAAAAGGCCGAGTGGTTCTTGTTGGAGATGCTTGGCACCCA 1019
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 998 GGCATTGCTCCTCCAGCATCAAAAGGACGAGTGGTTCTTGTTGGAGATGCTTGGCACCCA 1057
Query 1020 ATGACTCCAAATCTTGGACAAGGTGCTTGCTGTGCCTTGGAAGATTCAGTTGTTCTGGCC 1079
||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1058 ATGACTCCAAATCTTGGACAAGGTGCTTGTTGTGCCTTGGAAGATTCAGTAGTTCTGGCA 1117
Query 1080 AATAAACTTGCCAATGCAATAAATGGAGGAACCGAATCAATTGAAG-AGGCAATGGAATC 1138
|||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 1118 AATAAACTTGCCAATGCAATAAATGGAGGAACCGAATCAATTGAAGTAG-CAATGGAATC 1176
Query 1139 ATACGGGAGTGAGAGATGGTCTCGGGCATTCCCGTTGACAGTACGTGCAAACCTAGTCGG 1198
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1177 ATACGGGAGTGAGAGATGGTCTCGAGCATTCCCGTTGACAGTACGTGCAAACCTAGTTGG 1236
Query 1199 AGCACTTCTGCAATGGGAGAATCCTCTAGTGTGTTCCATAAGAAACAATATTGTCATACC 1258
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1237 CGCACTTCTGCAATGGGAGAATCCTCTAGTGTGTTCCATTAGAAACAATATTGTCATACC 1296
Query 1259 AAAGTTACTGAGACTCGGACCAATGCTGGAACACACAAACTTTGAGTGTGAACCTCTCTC 1318
|||||||||||| || ||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1297 AAAGTTACTGAGGCTTGGACCAATGCTTGAACACACAAACTTTGAGTGTGAACCTCTCTT 1356
Query 1319 TGTTTCAAAAAGCTGAATTTCGTATATATAGTGAGATC--TTGAA--------C---AA- 1364
|||||| ||||||||||||||||||||||||||||||| ||||| | ||
Sbjct 1357 TGTTTCTAAAAGCTGAATTTCGTATATATAGTGAGATCCATTGAATAGAGAGACTTGAAC 1416
Query 1365 --TGTATGATCAGAGGAACAATATAAACTCTGTGATTAAATGTTAAAGAATCATACAATG 1422
||||| |||| |||||||||||||||||||||||| ||||| ||||||||||||||||
Sbjct 1417 AATGTATAATCATAGGAACAATATAAACTCTGTGATTGAATGTAAAAGAATCATACAATG 1476
Query 1423 T 1423
|
Sbjct 1477 T 1477
> AT2G29720.1 | Symbols: CTF2B | FAD/NAD(P)-binding oxidoreductase
family protein | chr2:12700401-12702341 REVERSE LENGTH=1527
Length=1527
Score = 1644 bits (890), Expect = 0.0
Identities = 1188/1329 (89%), Gaps = 31/1329 (2%)
Strand=Plus/Plus
Query 11 GGCCATGTC-CGTTCTGCTTCCGATCTATCCTCTCCAATCCTTAGGCCA-AAGCAACAGA 68
||| ||||| | || ||| ||||||||||||| | | ||| ||||| |||||| |||
Sbjct 49 GGCTATGTCTC-TTGTGCGTCCGATCTATCCT-T----T-CTT-GGCCAGAAGCAAGAGA 100
Query 69 TGGTTCCCGGTTCGAACCAGATCAAAACCGGTGTGTTTAGC-ACTGACCA-ATGCTC-AA 125
||||| |||||||||||| ||| |||| |||| || ||| | || ||||| | || | ||
Sbjct 101 TGGTTTCCGGTTCGAACCGGATTAAAATCGGTTTGCTTAACAAC-GACCAGA-GC-CGAA 157
Query 126 ACAAACGGTGGTGACCA-AGAGGAGAATGTAGTGATTGTTGGCGCCGGGATTGGCGGACT 184
|||| ||||| ||| || ||||||||| |||||||||||||| | |||||||||||||||
Sbjct 158 ACAAGCGGTGTTGA-CAGAGAGGAGAAAGTAGTGATTGTTGGGGGCGGGATTGGCGGACT 216
Query 185 TACCACCGCCGTTTCTCTTCACCGGCTAGGAATCCGGTCGGTGGTGTTGGAGCAGGCAGA 244
| |||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 217 TGCCACTGCCGTTGCTCTTCACCGGCTTGGAATCCGGTCGGTGGTGTTGGAGCAGGCAGA 276
Query 245 GTCGCTTCGGACCGGAGGAACATCGCTGACCCTATTCAAGAATGGGTGGCGCGTTCTTGA 304
|||||||||||| |||||| |||||||||| |||| ||||||||||||||| ||||||||
Sbjct 277 GTCGCTTCGGACAGGAGGAGCATCGCTGACGCTATCCAAGAATGGGTGGCGTGTTCTTGA 336
Query 305 TGCCATCTCCGTCGGGCCTCAACTCCGACCGCAGTTTCTTGAAATCG-AAGGGATGGTAG 363
||||||||| |||| |||||||||||| ||||||||||||||| | ||||| |||||
Sbjct 337 CGCCATCTCCATCGGACCTCAACTCCGAAAGCAGTTTCTTGAAAT-GCAAGGGGTGGTAT 395
Query 364 TGAAGAAGGAAGATGGAAGAGAGCTTCGCTCTTTCAAATTCAAAGACGAA-GATCAAAGC 422
|||||||||||||||||||||||||||| ||||||||||| |||||| || |||||||||
Sbjct 396 TGAAGAAGGAAGATGGAAGAGAGCTTCGTTCTTTCAAATTTAAAGAC-AATGATCAAAGC 454
Query 423 CAAGAAGTTCGGGCCGTGGAGAGGCGAGTACTCTTGGAAACACTTGCAAGCCAGCTTCCT 482
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 455 CAAGAAGTTCGGGGGGTGGAGAGGCGAGTACTCTTGGAAACACTTGCAAGCCAGCTTCCT 514
Query 483 CCAGAAACCATTCGGTTCTCCTCAAAACTGGAAAGTATACAAAGCAATGCCAATGGTGAC 542
||| | ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 515 CCACAGACCATTCGGTTTTCTTCAAAACTGGAAAGTATACAAAGCAATGCCAATGGTGAC 574
Query 543 ACTCTCCTTCAACTTGGAGATGGAACCCGGTTGCTTGCAAAGATTGTTATTGGTTGTGAT 602
||||||||||||||| ||||||||| ||||| |||||||| |||||||| |||||||||
Sbjct 575 ACTCTCCTTCAACTTAAAGATGGAACTCGGTTTCTTGCAAATATTGTTATAGGTTGTGAT 634
Query 603 GGTATCCGGTCTAAGGTTGCAACTTGGATGGGGTTCAGTGAGCCGAAATATGTTGGTCAT 662
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 635 GGTATCCGGTCTAAGGTTGCAACTTGGATGGGGTTCAGTGAGCCGAAATATGTTGGTTAT 694
Query 663 TGCGCTTTCCGTGGCCTCGGGTTCTTTCCAAATGGGCAGCCATTTCAG-AACAAGGTGAA 721
||||||||||||||||| ||||||||||||||||| |||||||||||| || ||||||||
Sbjct 695 TGCGCTTTCCGTGGCCTTGGGTTCTTTCCAAATGGACAGCCATTTCAGCAA-AAGGTGAA 753
Query 722 CTACATATACGGGAAAGGGCTTAGAGCTGGATATGTACCTGTATCTGCAACAAAAGTCTA 781
|||||||| ||| | ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 754 CTACATATTCGGTAGAGGGCTTCGAGCTGGATATGTACCTGTATCTGCAACAAAAGTCTA 813
Query 782 CTGGTTCATCTGTTTCAACAGGCCATCACTAGGGCC-CAAAATTACGGATCCAGCTATCC 840
|||||||||| ||||||||| || || |||||||| | |||| | ||||||||||||||
Sbjct 814 CTGGTTCATCACTTTCAACAGCCCTTCTCTAGGGCCTC-AAATGATGGATCCAGCTATCC 872
Query 841 TaaaaaaaCAAGCCAAAGAACTTGTTAGTACCTGGCCAGAAGATCTGCAAAACCTCATCG 900
||| |||| ||||||| ||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 873 TAAGAAAAGAAGCCAAGGAACTGGTTAGTACCTGGCCAGAAGATCTGCAAAACCTCATTG 932
Query 901 ATCTAACACCTGATGAAACCATCAGCAGAACTCCTCTTGTAGACCGGTGGCTTTGGCCAG 960
||||||||||||||||| | ||||| ||||||||||||| ||||||||||||||||| |
Sbjct 933 ATCTAACACCTGATGAAGCAATCAGTAGAACTCCTCTTGCGGACCGGTGGCTTTGGCCTG 992
Query 961 GCATTGCTCCTCCAGCATCAAAAGGCCGAGTGGTTCTTGTTGGAGATGCTTGGCACCCAA 1020
||||||||||| ||||||||||||| | || ||||||||||||||||||||||||||||
Sbjct 993 GCATTGCTCCTTCAGCATCAAAAGGTAGGGTTGTTCTTGTTGGAGATGCTTGGCACCCAA 1052
Query 1021 TGACTCCAAATCTTGGACAAGGTGCTTGCTGTGCCTTGGAAGATTCAGTTGTTCTGGCCA 1080
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct 1053 TGACTCCAAATCTTGGACAAGGTGCTTGCTGTGCCTTGGAAGATTCAGTTCTTCTGGCAA 1112
Query 1081 ATAAACTTGCCAATGCAATAAATGGAGGAACCGAATCAATTGAAGAGGCAATGGAATCAT 1140
|||||||||||| ||||||||||||||| ||||||||| |||||| ||| ||||||||||
Sbjct 1113 ATAAACTTGCCAGTGCAATAAATGGAGGGACCGAATCAGTTGAAGGGGCGATGGAATCAT 1172
Query 1141 ACGGGAGTGAGAGATGGTCTCGGGCATTCCCGTTGACAGTACGTGCAAACCTAGTCGGAG 1200
| |||||||||||||||||| || ||||| ||||||||||| ||||||||||||||||
Sbjct 1173 ATAGGAGTGAGAGATGGTCTCAGGTATTCCGGTTGACAGTACTTGCAAACCTAGTCGGAA 1232
Query 1201 CACTTCTGCAATGGGAGAATCCTCTAGTGTGTTCCATAAGAAACAATATTGTCA-TACCA 1259
||||||||||| || |||||||| ||||||||| | ||| |||||||||||| | | |
Sbjct 1233 AACTTCTGCAATCAGACAATCCTCTTGTGTGTTCCGTTAGAGACAATATTGTCAGTGC-A 1291
Query 1260 AAGTTACTGAGACTC--GGACCAATGCTGGAACACACAAACTTTGAGTGTGAACCTCTCT 1317
| | | | ||| ||||||| | ||||||||||||||||||||||||| |||||||
Sbjct 1292 ATGGGAAA-ATCCTCTCGGACCAACGATGGAACACACAAACTTTGAGTGTGAGCCTCTCT 1350
Query 1318 CTGTTTCAA 1326
||||||||
Sbjct 1351 ATGTTTCAA 1359
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 70130161365
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5