BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482552 Length=2954 Score E Sequences producing significant alignments: (Bits) Value AT2G35800.1 | Symbols: | mitochondrial substrate carrier famil... 4481 0.0 > AT2G35800.1 | Symbols: | mitochondrial substrate carrier family protein | chr2:15044045-15048603 FORWARD LENGTH=3115 Length=3115 Score = 4481 bits (2426), Expect = 0.0 Identities = 2836/3020 (94%), Gaps = 84/3020 (3%) Strand=Plus/Plus Query 1 AGGGTCATCATCATTTCATGGTTAcctcctcctcctctcttcttactctcaccatatctg 60 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 6 AGGGTCATCATCATTTCATGGTTACCTCCTCTTCCTCTCTTCTTACTCTCACCATATCTG 65 Query 61 ------ctctctctctGTTTCAAGCTTTTGCTCCCATTGCTTCTTCATTTCATTTCCTTC 114 |||||||||||||||||||||||||||||| || ||||||||||||| Sbjct 66 CTCTCTCTCTCTCTCTGTTTCAAGCTTTTGCTCCCA-------TT--TTTCATTTCCTTC 116 Query 115 GTATTCTCGCTCGAGCTTAACGGTTGATATCCCAATGGCCAAATCGGTATCTGAATCGCC 174 ||||||||||||||||||| |||||||| | |||||| |||||||| ||| ||||||||| Sbjct 117 GTATTCTCGCTCGAGCTTAGCGGTTGATGTACCAATGACCAAATCGATATTTGAATCGCC 176 Query 175 GT--C--Gc-ttc-----ctt-t--ctt-t-t-tct-t--c-tgatt-t----cttttag 209 || | | ||| ||| | || | | ||| | | ||||| | ||||||| Sbjct 177 GTGGCTACCTTTCTTTTTCTTCTGATTTCTCTATCTCTCGCTTGATTCTACCACTTTTAG 236 Query 210 ggtttctttttttcccacggactttgggtttctttAAGAAGTTGGATTAG--TGCGTTTT 267 ||||||| || |||||| ||||||||||||||||||||||||| |||| | | |||||| Sbjct 237 GGTTTCTATTATTCCCAGGGACTTTGGGTTTCTTTAAGAAGTTCGATTCGTCTCCGTTTT 296 Query 268 GTTTTTAGGG-T-------TC-GT-GTGTTGGA-TTCGATC----TTTCTTTGGTATCTT 312 ||||||||| | || || |||||||| ||||||| ||| ||||||||||| Sbjct 297 CTTTTTAGGGTTAACGAAGTCTGTGGTGTTGGATTTCGATCTTTTTTTTTTTGGTATCTT 356 Query 313 --CCATTGAATGTTGCGGTGATAAGAGTGACGACTACAATGGTGTCTAAGAATGATCATA 370 ||||||| ||||||||||||||||| | ||| |||||||||||||||||||||||| Sbjct 357 CCCCATTGACTGTTGCGGTGATAAGAGAG-TGAC-GCAATGGTGTCTAAGAATGATCATA 414 Query 371 TCGAGACTTTCTTCAATTCAATCCAAGTAGTTAAAGA---TGTTCTTCTTCCGATTGAGC 427 |||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 415 TCGAGACTTTATTCAATTCAATCCAACTAGTTAAAGATGTTGTTCTTCTTCCGATTGAGC 474 Query 428 TCGGTGTGAAAAAGGCGGCAAGAGACATTGAAAATTGTTGGATAAGCAAAGAAAGGGATC 487 | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 475 TTGGTGTGAAAAAGGCGGCAAGAGATATTGAAAATTGTTGGATAAGCAAAGAAAGGGATC 534 Query 488 TAGGTCTTGTTTTGAGATCATCTGGAAGAAATAGGAAGAAGCGGATTTG-TGCTAGTCCT 546 ||||||||||||| ||||||||||||||||| ||||||||||||| ||| ||||| |||| Sbjct 535 TAGGTCTTGTTTTCAGATCATCTGGAAGAAACAGGAAGAAGCGGA-TTGTTGCTACTCCT 593 Query 547 GAATTTGACGACAATGCTACTAATAATGTTCA--GTGT-GTGGTAAGTGATGAGAGAAAG 603 |||||||||||||||||||||||||||||||| |||| ||||| | ||||||||||||| Sbjct 594 GAATTTGACGACAATGCTACTAATAATGTTCAGTGTGTGGTGGTTACTGATGAGAGAAAG 653 Query 604 AAAGGTTTGTCTATC---AAGATCCCTGTGAAGTCACTCTTTGGTATGTTTTCTCCGAAT 660 ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct 654 AAAGGTTTGTCTATCAAGAAGATCCCTGTGAAGTCACTCTTTGGTATGTTTTCTCCCAAT 713 Query 661 TTAG-CGAGTGACAAGTTGAGTCGTAGAAATGAGGTGGTGGTGGTGAAGAAAGATAAGTC 719 |||| | ||||| |||||||||||| ||||||| |||||||||| ||||||||||||||| Sbjct 714 TTAGTC-AGTGAGAAGTTGAGTCGTGGAAATGATGTGGTGGTGGCGAAGAAAGATAAGTC 772 Query 720 TTT-G-G-AGAAAGACGATGATTCTTGTACCAATTGCTTCAAGTTTGCGATGACTTGGTC 776 ||| | | ||||||| |||||||||||||| |||||||||||||||||||||||||||| Sbjct 773 TTTGGAGAAGAAAGATGATGATTCTTGTACTGATTGCTTCAAGTTTGCGATGACTTGGTC 832 Query 777 TTTGTTGGTTAGTGGCTTTGTTCATGCTTTTCCTATTCCTTTTAAGATAGGTAAAAAGAG 836 ||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||| Sbjct 833 TTTGTTGGTTAGTGGCTTTGTTCATGCTTTTCCTATTCCTTTTAAAATTGGTAAGAAGAG 892 Query 837 GATTCACAAAATGGGGGATGATGAGAACAGTCTACGTAAACACGGCCTTAAATCAAAGGC 896 |||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 893 GATTCATAAGATGGGGGATGATGAGAACAGTCTACGTAAACACGGCCTTAAATCAAAGGC 952 Query 897 GGCATTTGTAAATCGGAAAGAAGTGAGGCGTCAGTCAGTTGAATCTGCAGAAAAGGAAGG 956 ||||||||| | |||||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 953 GGCATTTGTGAGTCGGAAAGAAGTGAGGTGTCAGTCAGTTGAATCTGTAGAAAAGGAAGG 1012 Query 957 GAACCCTTTTTCGATTGAATGCGCTGTTGGTTTTGTTGTTGAAATGTTGGCTCAGAATCT 1016 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1013 GAACCCTTTTTCGATTGAATGCGCTGTTGGTTTTGTTGTTGAAATGTTGGCTCAGAATCT 1072 Query 1017 CCAGAAGCTGGACCAATTCATACAGGATAGTTCAGAGAATGAATCTTGTTGTTCCAAGGA 1076 ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||| Sbjct 1073 CCAGAAGCTGGACCAGTTTATACAGGATAGTTCAGAGAATGAATCTTGTTGTTCCAAGGA 1132 Query 1077 AGCTAGTCCTAATGATGGTCCACTTATCTTTAACATCTGGGAGGCTAGAAAACTTGACGT 1136 ||||||| |||||||| ||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1133 AGCTAGTTCTAATGATAGTCCACTTATCTTTAACATCTGGGAGGCTAGAAAACTCGACGT 1192 Query 1137 AAATGGATTCCTTGGGAACCTGATGTTTGCCAGAGTTGGAGATGTGGCGTCAGGTATAGG 1196 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1193 AAATGGATTCCTCGGGAACCTGATGTTTGCCAGAGTTGGAGATGTGGCGTCAGGTATAGG 1252 Query 1197 TGGCCTGACATCTCACGTAAGTGAAGATGGTGATGAAAGTAATGTCAGTACTACTGGTAA 1256 |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1253 TGGCCTGACATCTCACATAAGTGAAGATGGTGATGAAAGTAATGTCAGTACTGCTGGTAA 1312 Query 1257 GGAGGAAAGTGCAGTTGATTCTCCACAGAACCTGGCAACTGGACTACTGAGTATACCTTT 1316 |||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||| Sbjct 1313 GGAGGAAAGTGCAGTTGATTCTCCGCAGAACTTGGCAACTGGACTATTGAGTATACCTTT 1372 Query 1317 ATCAAATGTAGAGCGCTTAAAATCCACACTGTCCACGATTTCACTGACGGAACTTATTGA 1376 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 1373 ATCAAATGTAGAGCGCTTAAAATCCACACTGTCCACAATTTCACTGACGGAACTTATTGA 1432 Query 1377 GCTTTTACCACAATTAGGACGGCCATCAAGAGACCATCCAGACAAGAAAAAACTGATTTC 1436 |||||||||||||||||||| || ||||||||||||||||||||||||||||| ||||| Sbjct 1433 ACTTTTACCACAATTAGGACGACCTTCAAGAGACCATCCAGACAAGAAAAAACTAATTTC 1492 Query 1437 TGTTCAGGATTTTTTCAGATACACAGAGTCTGAAGGCAGGAGGTTCTTTGAAGAGTTAGA 1496 |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1493 TGTTCAGGATTTTTTCAGATACACCGAGTCTGAAGGCAGGAGGTTCTTTGAAGAATTAGA 1552 Query 1497 TAGAGATGGTGATGGCAAAGTAACTTTGGAAGATCTGGAAATTGCAATGAGGAGAAGAAA 1556 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 1553 TAGAGATGGTGATGGCAAAGTAACTTTGGAGGATCTGGAAATTGCAATGAGGAGAAGAAA 1612 Query 1557 GTTGCCCAGAAGATACGCCAAGGAATTTATGCGACGAGCTAGAAGTCATCTTTTCTCGAA 1616 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1613 ATTGCCCAGAAGATACGCCAAGGAATTTATGCGACGAGCTAGGAGTCATCTTTTCTCGAA 1672 Query 1617 ATCGTTTGGTTGGAAGCAATTTTTGTCCTTGATGGAACAGAAGGAGCCAACCATCCTCCG 1676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1673 ATCGTTTGGTTGGAAGCAATTTTTGTCCTTGATGGAACAGAAGGAGCCAACCATCCTCCG 1732 Query 1677 TGCCTATACTTCTCTCTGTTTGACCAAGTCTGGTACTCTTCAGAAGAGTGAGATATTGGC 1736 |||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||| Sbjct 1733 TGCCTATACTTCTCTCTGCTTGACCAAGTCTGGTACTCTTAAGAAAAGTGAGATATTGGC 1792 Query 1737 ATCACTAAATAACGCAGGACTTCCTGCTAATGAAGAAAATGCTATAGCCATGATGAGATT 1796 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1793 ATCACTAAATAACGCAGGACTTCCTGCTAATGAAGAAAATGCTATAGCCATGATGAGATT 1852 Query 1797 TTTGAAGGCTGATACCGAGGAGTCTATCTCATACGGACATTTCCGTAATTTCATGGTGTT 1856 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 1853 TTTGAAGGCTGATACCGAGGAGTCTATCTCATACGGACATTTCCGTAATTTCATGGTTTT 1912 Query 1857 GCTGCCATATGAGCGGTTACAAGATGATCCTCGTAACATCTGGTTTGAAGCTGCGACTGT 1916 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1913 GCTGCCATATGAGCGCTTACAAGATGATCCTCGTAACATCTGGTTTGAAGCTGCGACTGT 1972 Query 1917 TGTTGCTGTTGCACCTCCTGTGGCCTTACCTGCTGGAGATGTTCTAAAATCTGCATTAGC 1976 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1973 TGTTGCTGTTGCACCCCCTGTGGCCTTACCTGCTGGAGATGTTCTAAAATCTGCATTAGC 2032 Query 1977 AGGAGGGCTTGCCTCTGCTCTCTCCACCTCCTTAATGCATCCGATTGACACAATCAAGAC 2036 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 2033 GGGAGGGCTTGCCTCTGCTCTCTCCACTTCCTTAATGCATCCGATTGACACAATCAAGAC 2092 Query 2037 ACGTGTGCAAGCATCAACCTTGTCATTTCCTGAAGTAATAGCGAAGCTTCCAGAGATTGG 2096 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2093 ACGTGTGCAAGCATCAACCTTGTCATTTCCTGAAGTAATAGCCAAGCTTCCAGAGATTGG 2152 Query 2097 TGTGCGGGGAGTGTATAGGGGTTCTATTCCAGCAATTCTTGGACAATTTTCAAGCCATGG 2156 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2153 TGTCCGGGGAGTGTATAGGGGTTCTATTCCAGCAATTCTTGGACAATTTTCAAGCCATGG 2212 Query 2157 CCTGCGAACAGGAATATTCGAAGCAAGCAAACTTGTGTTGATCAATTTTGCTCCCAATCT 2216 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2213 CCTGCGGACAGGAATATTCGAAGCAAGCAAACTTGTGTTGATCAATTTTGCTCCCAATCT 2272 Query 2217 CCCAGAAATTCAGGTTCAATCGATTGCATCATTCTGCAGCACACTATTAGGCACAGCTGT 2276 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2273 CCCAGAAATTCAGGTTCAATCGATTGCATCATTCTGCAGCACACTATTAGGCACAGCTGT 2332 Query 2277 GCGGATTCCATGTGAGGTGCTGAAGCAACGGTTGCAGGCCGGCATGTTTAATAATGTAGG 2336 ||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| Sbjct 2333 GCGGATTCCATGTGAGGTGCTGAAGCAACGGTTGCAGGCTGGCATGTTTAACAATGTAGG 2392 Query 2337 GGAAGCCATTGTAGGGACGTGGAAGCAAGATGGTCCAAGTGGCTTTTTCCGTGGGACAGG 2396 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2393 GGAAGCCATTGTCGGGACGTGGAAGCAAGATGGTCCAAGTGGCTTTTTCCGTGGGACAGG 2452 Query 2397 CGCAACTCTTTGCCGTGAAGTTCCACTATACGTTGTTGGCATGGGACTGTATGCAGAGTC 2456 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 2453 CGCAACTCTTTGCCGCGAAGTTCCACTATACGTTGTTGGCATGGGACTGTATGCAGAGTC 2512 Query 2457 CAAAAAGATGGTGGCGCAAGCGCTGGGAAGAGAACTCGAGGCATGGGAGACAATAGCAGT 2516 ||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| || Sbjct 2513 CAAAAAGATGGTGGCGCAAGCTCTGGGAAGAGAACTGGAGGCATGGGAGACAATAGCGGT 2572 Query 2517 TGGGGCGGTGTCAGGAGGTATAGCAGCAGTTGTAACAACCCCATTTGATGTGATGAAGAC 2576 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 2573 TGGGGCGGTGTCAGGAGGTATTGCAGCAGTTGTAACAACCCCATTTGATGTGATGAAGAC 2632 Query 2577 GAGAATGATGACTGCAACACCAGGGAGACCGATCTCAATGTCGATGGTTGTTGTCTCGAT 2636 |||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||||| Sbjct 2633 GAGAATGATGACTGCAACGCCAGGGAGACCGATCTCAATGTCTATGGTTGTTGTATCGAT 2692 Query 2637 TCTGCGTAATGAGGGACCGCTAGGTTTGTTCAAAGGAGCAGTCCCGAGGTTCTTCTGGGT 2696 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2693 TCTGCGTAATGAGGGACCGCTAGGTTTGTTCAAAGGAGCAGTCCCGAGGTTCTTCTGGGT 2752 Query 2697 GGCTCCTCTAGGTGCTATGAACTTTGCTGGCTACGAACTAGCCAAGAAAGCTATGCAGAA 2756 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2753 GGCTCCTCTAGGTGCTATGAACTTTGCTGGGTACGAACTAGCCAAGAAAGCTATGCAGAA 2812 Query 2757 GAACGAGGATGCTGTGCTAGCAGATCAGCTTGGTCAGAAGAAGCTTTGCTAATGCGATTT 2816 |||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct 2813 GAACGAAGATGCAGTGCTAGCGGATCAGCTTGGTCAGAAGAAGCTTTGCTAATGGGATTT 2872 Query 2817 CACTTTGCTTTGCTTTGCTGCTACGAAGTTTTTTGGGGGCAGCTTAAGCCGGAGACTCTC 2876 ||||||||||||| ||| |||||||||||||||||||||||||||||||||||| | Sbjct 2873 TACTTTGCTTTGCT--GCT---ACGAAGTTTTTTGGGGGCAGCTTAAGCCGGAGACTCAC 2927 Query 2877 CTCTGTTGTTAAATGCTACTTTGCAAATTTTTGACaaaaaaaaaaG--TTCATTGTTTTG 2934 |||| |||||||| ||||||||||||| |||||||||||||||||| |||||||||||| Sbjct 2928 CTCTTTTGTTAAAAGCTACTTTGCAAAATTTTGACAAAAAAAAAAGGGTTCATTGTTTTG 2987 Query 2935 TTGTGCATTGAGGACAGTTT 2954 |||||||||||||||||||| Sbjct 2988 TTGTGCATTGAGGACAGTTT 3007 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 146838642161 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5