BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482564
Length=2911
Score E
Sequences producing significant alignments: (Bits) Value
AT2G35940.1 | Symbols: BLH1, EDA29 | BEL1-like homeodomain 1 | ... 3801 0.0
AT2G35945.1 | Symbols: | other RNA | chr2:15090867-15091764 FO... 1230 0.0
AT2G23760.1 | Symbols: BLH4, SAW2 | BEL1-like homeodomain 4 | c... 110 1e-22
> AT2G35940.1 | Symbols: BLH1, EDA29 | BEL1-like homeodomain 1
| chr2:15088833-15092415 REVERSE LENGTH=2706
Length=2706
Score = 3801 bits (2058), Expect = 0.0
Identities = 2355/2491 (95%), Gaps = 50/2491 (2%)
Strand=Plus/Plus
Query 458 TATCAAT-CAGCTTGGTGAAAGAAGAAGATCAAGAATTGAAAGAGAATCAAAGAAAACGA 516
||||||| ||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 228 TATCAATCCAGCTTGGTGAAAGAAG--G-TCAAGAATTGAAAGAGAATCAAAGAAAACGA 284
Query 517 CACCGTTTCATTCGTGTGTAACAACAGTATATACTAAT-TATAGATGGCTGCTTACTTTC 575
| |||||||||||||||||||||| || || | || ||||||||||||||||||||
Sbjct 285 CGTCGTTTCATTCGTGTGTAACAAC--TA-CTAATTATACATAGATGGCTGCTTACTTTC 341
Query 576 ACGGAAACCCACCGGAGATCTCAGCCGGATCCGACGGTGGTCTGCAAACGTTGATCCTCA 635
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 342 ACGGAAACCCACCGGAGATCTCTGCCGGATCCGACGGTGGTCTTCAAACGTTGATCCTCA 401
Query 636 TGAATCCAACTACTTACGTTCAATacactcgacaagacaacgact--------------- 680
|||||||||||||||||||||| ||||| | ||||||||||||||
Sbjct 402 TGAATCCAACTACTTACGTTCAGTACACCCAACAAGACAACGACTCGAACAACAACAACA 461
Query 681 -c-g-aac-a-a-caacaacaac-a-ac-aactcgaacac--a-aacaacaacaGTAGTT 728
| | ||| | | |||||||||| | || ||| | ||||| | ||||||||||||||||
Sbjct 462 ACAGCAACAATAGCAACAACAACAACACAAACACAAACACAAACAACAACAACAGTAGTT 521
Query 729 TCGTTTTCCTCGATTCCCACGCGCCGCAGCCTAACGCGAGCCAGCAGTTCGTCGGAATAC 788
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 522 TCGTTTTCCTCGATTCCCACGCGCCGCAGCCAAACGCGAGCCAGCAGTTCGTCGGAATAC 581
Query 789 CACTCTCCGGTCACGAAGCCGCTTCCATTACAGCCGCCGACAACATCTCCGTACTTCACG 848
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 582 CACTCTCAGGTCACGAAGCTGCTTCCATTACAGCCGCCGACAACATCTCCGTACTTCACG 641
Query 849 GATACCCTCCGCGCGTGCAGTACAGTCTCTACGGTAGCCACCAAGTGGATCCCACTCACC 908
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 642 GTTATCCTCCGCGCGTGCAGTACAGTCTCTACGGTAGCCACCAAGTGGATCCCACTCACC 701
Query 909 AGCAAGCCGCGTGTGAGACGCCACGCGCGCAACAAGGCCTCTCTTTAACTCTCTCGTCAC 968
||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |
Sbjct 702 AGCAAGCCGCGTGTGAGACGCCACGCGCGCAGCAAGGCCTCTCTTTAACCCTCTCGTCTC 761
Query 969 AACAGCAGCAGCAACAGCAACATCATCAACAACACCAGCCTATCCACGTCGGGTTCGGGT 1028
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 762 AACAGCAGCAGCAACAGCAACATCATCAACAACACCAGCCTATTCACGTCGGATTCGGGT 821
Query 1029 CCGGACCA-GGAGAAGATATCCGGGTTGGGTCTGGTTCTACAGGATCGGGGGTAACAAAC 1087
||||| || ||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 822 CCGGA-CATGGAGAAGATATCCGGGTCGGGTCTGGCTCTACAGGATCGGGGGTAACAAAC 880
Query 1088 GGTATAGCGAATCTTGTAAGCTCCAAGTACTTGAAGGCAGCACAAGAGCTTCTTGACGAA 1147
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 881 GGTATAGCTAATCTTGTTAGCTCCAAGTACTTGAAGGCAGCACAAGAGCTTCTTGACGAA 940
Query 1148 GTAGTCAACGCTGATTCCGATGACATGAACGCTAAATCCCAACTATTCTTATCGAAAAAG 1207
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 941 GTAGTCAACGCTGATTCCGATGACATGAACGCTAAATCCCAACTATTCTCATCGAAAAAG 1000
Query 1208 GGGAGTAGCGGAAACGATAAGGCTGTCGGAGAATCCTCCGCCGGCGCTGGAGGAGAAGGT 1267
|| ||| ||||||| ||||| ||||||||||||| || |||||||||||||||||||||
Sbjct 1001 GGTAGTTGCGGAAATGATAAACCTGTCGGAGAATCATCGGCCGGCGCTGGAGGAGAAGGT 1060
Query 1268 TCCGGTGGCGGAGGAGAAGCAGCTGGGAAACGTACGGTGGAGCTAGGCACGGCAGAGAGA 1327
||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 1061 TCCGGTGGCGGAGCAGAAGCAGCCGGGAAACGTCCGGTGGAGCTAGGCACGGCAGAGAGA 1120
Query 1328 CAAGAAATACAGATGAAGAAAGCAAAGCTGAGTAACATGCTTCATGAGGTGGAGCAGAGA 1387
|||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 1121 CAAGAAATACAGATGAAGAAAGCAAAACTTAGTAACATGCTTCATGAGGTGGAGCAGAGA 1180
Query 1388 TATAGACAGTACCACCAGCAGATGCAGATGGTGATCTCGTCGTTCGAGCAAGCGGCAGGG 1447
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1181 TATAGACAGTACCACCAGCAGATGCAGATGGTGATCTCTTCGTTCGAGCAAGCGGCAGGG 1240
Query 1448 ATAGGGTCAGCGAAATCATACACGTCACTTGCACTGAAGACCATATCAAGACAGTTCCGG 1507
||||| |||||||| ||||||||||| || ||| |||| ||||||||||||||||||||
Sbjct 1241 ATAGGATCAGCGAAGTCATACACGTCGCTAGCATTGAAAACCATATCAAGACAGTTCCGT 1300
Query 1508 TGCTTGAAAGAGGCCATCGCGGGTCAGATAAAAGCGGCCAACAAGAGTCTTGGGGAGGAA 1567
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1301 TGCTTGAAAGAGGCGATCGCTGGTCAGATAAAAGCGGCCAACAAGAGTCTTGGGGAGGAA 1360
Query 1568 GATTCGGTGTCTGGTGTTGGAAGGTTTGAGGGGTCGAGGCTCAAGTTCGTGGACCATCAC 1627
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct 1361 GATTCAGTGTCTGGTGTTGGGAGGTTTGAGGGGTCGAGGCTCAAGTTCGTGGACCACCAC 1420
Query 1628 TTGAGACAGCAAAGAGCTCTTCAGCAGCTGGGAATGATTCAACATCCTTCCAATAATGCT 1687
||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1421 TTGAGACAGCAAAGAGCTCTTCAACAACTGGGAATGATTCAACATCCTTCCAATAATGCT 1480
Query 1688 TGGAGACCTCAACGTGGTCTCCCCGAACGAGCCGTCTCAGTCCTCCGTGCTTGGCTCTTC 1747
||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct 1481 TGGAGACCTCAACGTGGTCTCCCAGAACGAGCCGTCTCAGTTCTCCGTGCTTGGCTCTTC 1540
Query 1748 GAACACTTTCTTCACCCATACCCTAAGGATTCGGACAAGCACATGCTAGCCAAGCAAACA 1807
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1541 GAACACTTTCTTCATCCATACCCTAAGGATTCGGACAAGCACATGCTAGCTAAGCAAACA 1600
Query 1808 GGACTCACTCGGAGCCAGGTGTCGAACTGGTTCATAAACGCTAGAGTTCGGTTATGGAAA 1867
||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 1601 GGACTCACTCGTAGCCAGGTGTCGAACTGGTTTATAAACGCGAGAGTTCGGTTATGGAAA 1660
Query 1868 CCAATGGTGGAAGAGATGTACATGGAGGAAATGAAGGAGCAGGGAAAAAACATGGGATCC 1927
||||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct 1661 CCAATGGTGGAGGAGATGTACATGGAGGAAATGAAGGAGCAGGCAAAGAACATGGGATCC 1720
Query 1928 ATGGAGAAGACTCCTCTGGATCAAAGCAACGAAGATTCTGCTTCTAAGTCAACAAGTAAC 1987
||||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1721 ATGGAAAAGACTCCTTTGGATCAAAGCAACGAAGATTCTGCTTCAAAGTCAACAAGTAAC 1780
Query 1988 CAAGAGAAGAGTCCC-ATGGCCGACACTAATTACCATATGAATCCCAATCACAACGGTGA 2046
||||| ||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1781 CAAGAAAAGAG-CCCAATGGCGGACACTAATTACCATATGAATCCCAATCACAACGGTGA 1839
Query 2047 CCTAGAAGGCGTCACTGGAATGCAAGGAAGCCCCAAGAGACTAAGAACCAGCGACGAGAC 2106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1840 CCTAGAAGGCGTCACTGGAATGCAAGGAAGCCCCAAGAGACTAAGAACCAGCGACGAGAC 1899
Query 2107 AACGATGCAGCCTATAAATGCGGATTTCAGTTCCAACGAGAAGCTCACGATGAAGATTCT 2166
|| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1900 AATGATGCAGCCAATAAATGCGGATTTCAGCTCCAACGAGAAGCTCACGATGAAGATTCT 1959
Query 2167 AGAAGAACGGCAAGGGATAAGATCAGACGGTGGCTACCCTTTCATGGGGAATTTCGGGCA 2226
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct 1960 AGAAGAACGGCAAGGGATAAGATCAGATGGTGGCTACCCTTTCATGGGTAATTTCGGGCA 2019
Query 2227 ATACCAAATGGATGAGATGTCAAGATTTGATGTAGTCTCAGACCAGGAGCTCATGGCGCA 2286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2020 ATACCAAATGGATGAGATGTCAAGATTTGATGTAGTCTCAGACCAGGAGCTCATGGCGCA 2079
Query 2287 AAGGTACTCAGGAAACAACAATGGCGTGTCCCTCACGTTAGGTTTACCCCACTGTGATAG 2346
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 2080 AAGGTACTCAGGAAACAACAATGGCGTGTCCCTCACGTTAGGTTTACCTCATTGTGATAG 2139
Query 2347 CTTGTCGTCCACGCACCATCAGGGTTTCATGCAGACCCACCATGGGATTCCTATAGGGAG 2406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2140 CTTGTCGTCCACGCACCATCAGGGTTTCATGCAGACCCACCATGGGATTCCTATAGGGAG 2199
Query 2407 AAGAGTGAAAATAGGAGAAACAGAGGAATATGGAGCCGCCACCATCAATGGTGGTAGCTC 2466
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2200 AAGAGTGAAAATAGGAGAAACAGAGGAATATGGACCCGCCACCATCAATGGTGGTAGCTC 2259
Query 2467 AG-CCACAACCGCGCATTCATCAGCCGCAGCTGCCGCGGCTTACAATGGGATGAACATAC 2525
| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2260 -GACCACAACCGCACATTCATCAGCGGCAGCTGCCGCGGCTTACAATGGGATGAACATAC 2318
Query 2526 AGAACCAGAAGAGATATGTGGCTCAGTTATTGCCCGACTTCGTTGCATAAACCCATCTCT 2585
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2319 AGAACCAGAAGAGATATGTGGCTCAGTTATTGCCCGACTTCGTTGCATAAACCCATCTCT 2378
Query 2586 CTAGAAGGAGAAACCGAAACAGGTTATTATA--CGTTTCTAGTTTTTAATTAGTATATAG 2643
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2379 CTAGAAGGAGAAACCGAAACAGGTTATTATATACGTTTCTAGTTTTTAATTAGTATATAG 2438
Query 2644 TTTCTCATACCATTGAACCAAAACAAAGAACAAAATTTAATTTTAGTCTTTGGTTAAATA 2703
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2439 TTTCTCATACCATTGAACCAAAACAAAGAACAAAATTTAATTTTAGTCTTTGGTTATATA 2498
Query 2704 TGGCCGACGGTTGTATATCGATTTTGTAAtttttttttttttcgtttttATTGGGGGATG 2763
|||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 2499 TGGCCGACGGTTGTATATCGATTTTGTAATTTTTTTTTTT--CGTTTCTATTGGGGGATG 2556
Query 2764 GATAGGGTTATATATGTATATGGATTAGTTACGTGTAATAGCTTGCATTGGGTGTATACC 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2557 GATAGGGTTATATATGTATATGGATTAGTTACGTGTAATAGCTTGCATTGGGTGTATACC 2616
Query 2824 AAAATAttttttttGCTTTTATTACAATGTAATAAT-AA---GATAGTGAACTGATCTAT 2879
||||||| ||||| ||||||||||||||||||||| || ||||||||||||||||||
Sbjct 2617 AAAATATATTTTTA-CTTTTATTACAATGTAATAATTAATAAGATAGTGAACTGATCTAT 2675
Query 2880 CAAATATGGAATGGTGATTACAGATTGGATC 2910
||||||||||||| |||||||||||| ||||
Sbjct 2676 CAAATATGGAATGATGATTACAGATTAGATC 2706
Score = 315 bits (170), Expect = 2e-84
Identities = 174/176 (99%), Gaps = 0/176 (0%)
Strand=Plus/Plus
Query 1 ATTATTTCTCAGCTTTTTTAATGTATTTTATATTTCCCCTTTGAGCAAGAAAAGAGTTGC 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 63 ATTATTTCTCAGCTTTTTAAATGTATTTTATATTTCCCCTTTGAGCAAGAAAAGAGTTGC 122
Query 61 AGAGATCTTTGAGTCTGACACAGAGACCAAACTCACATAGCAATCACACACATCTCCACA 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 123 AGAGATCTTTGAGTCTGACACAGAGACCAAACTCACATAGCAATCACACACATCTCCACA 182
Query 121 AACACAGCTTGAGATGATCATGAAACACGTGCATCATCAGATCTCTATCAATCCAG 176
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 183 AACACAGCTTGAGATGATCATGAAACACGTGCATCCTCAGATCTCTATCAATCCAG 238
> AT2G35945.1 | Symbols: | other RNA | chr2:15090867-15091764
FORWARD LENGTH=898
Length=898
Score = 1230 bits (666), Expect = 0.0
Identities = 829/902 (92%), Gaps = 33/902 (4%)
Strand=Plus/Minus
Query 493 TTGAAAGAGAATCAAAGAAAACGACACCGTTTCATTCGTGTGTAACAACAGTATATACTA 552
||||||||||||||||||||||||| |||||||||||||||||||||| || || |
Sbjct 898 TTGAAAGAGAATCAAAGAAAACGACGTCGTTTCATTCGTGTGTAACAAC--TA-CTAATT 842
Query 553 AT-TATAGATGGCTGCTTACTTTCACGGAAACCCACCGGAGATCTCAGCCGGATCCGACG 611
|| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 841 ATACATAGATGGCTGCTTACTTTCACGGAAACCCACCGGAGATCTCTGCCGGATCCGACG 782
Query 612 GTGGTCTGCAAACGTTGATCCTCATGAATCCAACTACTTACGTTCAATacactcgacaag 671
||||||| |||||||||||||||||||||||||||||||||||||| ||||| | |||||
Sbjct 781 GTGGTCTTCAAACGTTGATCCTCATGAATCCAACTACTTACGTTCAGTACACCCAACAAG 722
Query 672 acaacgact----------------c-g-aac-a-a-caacaacaac-a-ac-aactcga 707
||||||||| | | ||| | | |||||||||| | || ||| | |
Sbjct 721 ACAACGACTCGAACAACAACAACAACAGCAACAATAGCAACAACAACAACACAAACACAA 662
Query 708 acac--a-aacaacaacaGTAGTTTCGTTTTCCTCGATTCCCACGCGCCGCAGCCTAACG 764
|||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 661 ACACAAACAACAACAACAGTAGTTTCGTTTTCCTCGATTCCCACGCGCCGCAGCCAAACG 602
Query 765 CGAGCCAGCAGTTCGTCGGAATACCACTCTCCGGTCACGAAGCCGCTTCCATTACAGCCG 824
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 601 CGAGCCAGCAGTTCGTCGGAATACCACTCTCAGGTCACGAAGCTGCTTCCATTACAGCCG 542
Query 825 CCGACAACATCTCCGTACTTCACGGATACCCTCCGCGCGTGCAGTACAGTCTCTACGGTA 884
||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct 541 CCGACAACATCTCCGTACTTCACGGTTATCCTCCGCGCGTGCAGTACAGTCTCTACGGTA 482
Query 885 GCCACCAAGTGGATCCCACTCACCAGCAAGCCGCGTGTGAGACGCCACGCGCGCAACAAG 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 481 GCCACCAAGTGGATCCCACTCACCAGCAAGCCGCGTGTGAGACGCCACGCGCGCAGCAAG 422
Query 945 GCCTCTCTTTAACTCTCTCGTCACAACAGCAGCAGCAACAGCAACATCATCAACAACACC 1004
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 421 GCCTCTCTTTAACCCTCTCGTCTCAACAGCAGCAGCAACAGCAACATCATCAACAACACC 362
Query 1005 AGCCTATCCACGTCGGGTTCGGGTCCGGACCA-GGAGAAGATATCCGGGTTGGGTCTGGT 1063
||||||| |||||||| |||||||||||| || ||||||||||||||||| ||||||||
Sbjct 361 AGCCTATTCACGTCGGATTCGGGTCCGGA-CATGGAGAAGATATCCGGGTCGGGTCTGGC 303
Query 1064 TCTACAGGATCGGGGGTAACAAACGGTATAGCGAATCTTGTAAGCTCCAAGTACTTGAAG 1123
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct 302 TCTACAGGATCGGGGGTAACAAACGGTATAGCTAATCTTGTTAGCTCCAAGTACTTGAAG 243
Query 1124 GCAGCACAAGAGCTTCTTGACGAAGTAGTCAACGCTGATTCCGATGACATGAACGCTAAA 1183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 GCAGCACAAGAGCTTCTTGACGAAGTAGTCAACGCTGATTCCGATGACATGAACGCTAAA 183
Query 1184 TCCCAACTATTCTTATCGAAAAAGGGGAGTAGCGGAAACGATAAGGCTGTCGGAGAATCC 1243
||||||||||||| |||||||||||| ||| ||||||| ||||| |||||||||||||
Sbjct 182 TCCCAACTATTCTCATCGAAAAAGGGTAGTTGCGGAAATGATAAACCTGTCGGAGAATCA 123
Query 1244 TCCGCCGGCGCTGGAGGAGAAGGTTCCGGTGGCGGAGGAGAAGCAGCTGGGAAACGTACG 1303
|| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||
Sbjct 122 TCGGCCGGCGCTGGAGGAGAAGGTTCCGGTGGCGGAGCAGAAGCAGCCGGGAAACGTCCG 63
Query 1304 GTGGAGCTAGGCACGGCAGAGAGACAAGAAATACAGATGAAGAAAGCAAAGCTGAGTAAC 1363
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct 62 GTGGAGCTAGGCACGGCAGAGAGACAAGAAATACAGATGAAGAAAGCAAAACTTAGTAAC 3
Query 1364 AT 1365
||
Sbjct 2 AT 1
> AT2G23760.1 | Symbols: BLH4, SAW2 | BEL1-like homeodomain 4 |
chr2:10107709-10112823 REVERSE LENGTH=2213
Length=2213
Score = 110 bits (59), Expect = 1e-22
Identities = 159/206 (77%), Gaps = 12/206 (6%)
Strand=Plus/Plus
Query 1688 TGGAGACCTCAACGTGGTCTCCCCGAACGAGCCGTCTCA-GTCCTCCGTGCTTGGCTCTT 1746
|||||||| ||||||||| | || ||||| |||| | | |||| | |||||||| ||
Sbjct 1360 TGGAGACCGCAACGTGGTTTGCCTGAACGCTCCGT-TAATATCCTTAGAGCTTGGCTATT 1418
Query 1747 CGAACACTTTCTTCACCCATACCCTAAG-GATTCGGACAAGCACATGC-TAGCCAAG-CA 1803
||| || |||||| | || ||||| ||| ||| | || |||||| | | ||| || | ||
Sbjct 1419 CGAGCATTTTCTTAATCCGTACCC-AAGCGATGCTGATAAGCACCT-CTTAG-CACGACA 1475
Query 1804 AACAGGACTCACT-C-GGAGCCAGGTGTCGAACTGGTTCATAAACGCTAGAGTTCGGTTA 1861
|| || | | | | | | |||||||| || ||||||||||| ||||| ||||| ||
Sbjct 1476 GACTGG-TTTA-TCCAGAAATCAGGTGTCAAATTGGTTCATAAATGCTAGGGTTCGCCTA 1533
Query 1862 TGGAAACCAATGGTGGAAGAGATGTA 1887
||||||||||||||||||||||||||
Sbjct 1534 TGGAAACCAATGGTGGAAGAGATGTA 1559
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144681463612
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5