BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482625
Length=1329
Score E
Sequences producing significant alignments: (Bits) Value
AT2G36460.1 | Symbols: | Aldolase superfamily protein | chr2:1... 1868 0.0
AT5G03690.1 | Symbols: | Aldolase superfamily protein | chr5:9... 713 0.0
> AT2G36460.1 | Symbols: | Aldolase superfamily protein | chr2:15296701-15298514
REVERSE LENGTH=1432
Length=1432
Score = 1868 bits (1011), Expect = 0.0
Identities = 1189/1273 (93%), Gaps = 19/1273 (1%)
Strand=Plus/Plus
Query 1 TCTTCTGGAAGCTACCATCACCCCCCTCCTATATAa-tc---a-tcatcatcatcatcat 55
|||||||||||||||||||| | | ||||||||||| || | ||| ||||||| ||||
Sbjct 5 TCTTCTGGAAGCTACCATCA-CTCTCTCCTATATAACTCAAAATTCACCATCATCTTCAT 63
Query 56 catcatcatcTTCAAT--TTCTCTCTTTATCCAA-TTCTCTTCATCGAATCGA---TTCT 109
|||||||||| || || | || ||||||||||| || |||||| | |||||| ||||
Sbjct 64 CATCATCATCATC-ATCATCCTTTCTTTATCCAACTT-TCTTCACCAAATCGATTCTTCT 121
Query 110 TCAACCATGTCTTGCTTCACCACCAAATTCGCCGATGAGCTGATTGCTAACGCTGCGTAC 169
||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 122 TCAACCATGTCTTCCTTCACCTCCAAATTCGCCGATGAGCTGATTGCTAACGCTGCTTAC 181
Query 170 ATCGGCACACCTGGGAAAGGTATCCTTGCGGCAGATGAATCAACTGGTACCA-TCGGAAA 228
||||| |||||||| ||||||||||||||||||||||||||||||||||| | | |||||
Sbjct 182 ATCGGAACACCTGGAAAAGGTATCCTTGCGGCAGATGAATCAACTGGTACTATTGGGAAA 241
Query 229 GCGTCTAGCTAGCATCAACGTTGAGAACGTTGAATCGAACAGACGTGCTCTTCGTGAGCT 288
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 242 -CGTCTCGCTAGCATCAACGTTGAGAACGTTGAATCCAACAGACGTGCTCTTCGTGAGCT 300
Query 289 TCTCTTCACTACTCCTGGAGCTCTTCCTTGTCTCAGTGGTGTTATCCTCTTTGAAGAGAC 348
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct 301 TCTCTTCACTACTCCTGGAGCTCTTCCTTGCCTCAGTGGTGTTATCCTCTTTGAAGAAAC 360
Query 349 TCTCTACCAGAAGAGCTCTAATGGTACGCCTTTTGTGGATATGTTGAAGAGTGCAGGAGT 408
||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct 361 TCTTTACCAGAAGAGCTCTGATGGTACGCCTTTTGTTGATATGTTGAAGAGTGCAGGAGT 420
Query 409 CTTGCCTGGTATTAAGGTTGATAAGGGTACCGTTGAGCTTGCTGGAACCAATGGTGAGAC 468
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 TTTGCCTGGTATTAAGGTTGATAAGGGTACCGTTGAGCTTGCTGGAACCAATGGTGAGAC 480
Query 469 GACTACTCAAGGTCTTGATGGTCTTGGTGACCGTTGCAAGAAGTACTACGAGGCTGGTGC 528
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 481 TACTACTCAAGGTCTTGATGGTCTTGGTGACCGTTGCAAGAAATACTACGAGGCTGGTGC 540
Query 529 TCGTTTCGCTAAGTGGCGTGCGGTTCTTAAGATTGGTGAGAATGAGCCCTCTGAGTTAGC 588
||||||||| |||||||||||||||||||||||||||| |||||||| ||| |||||||
Sbjct 541 TCGTTTCGCCAAGTGGCGTGCGGTTCTTAAGATTGGTGTTAATGAGCCATCTCAGTTAGC 600
Query 589 TATCCATGAGAACGCTTATGGATTGGCTAGGTACGCTGTCATTTGTCAGGAGAACGGTCT 648
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 601 TATCCATGAGAACGCTTATGGATTGGCTAGGTATGCTGTCATTTGTCAGGAGAACGGTCT 660
Query 649 TGTGCCGATTGTGGAGCCTGAGATTCTTGTTGATGGTTCTCACGACATCCACAAGTGTGC 708
|||||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||
Sbjct 661 TGTGCCGATTGTGGAGCCTGAGATTCTTGTTGATGGCTCTCATGACATTCAGAAGTGTGC 720
Query 709 CGCGGTGACAGAGCGTGTTCTTGCAGCTTGCTACAAGGCCCTGAGTGATCACCATGTCTT 768
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 721 CGCGGTGACAGAGCGTGTTCTTGCAGCTTGCTACAAGGCTCTGAGTGATCACCATGTCTT 780
Query 769 GCTTGAAGGAACACTCTTGAAACCAAACATGGTGACTCCAGGATCAGAGAGTGCCAAGGT 828
||| |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||
Sbjct 781 GCTAGAAGGAACACTCTTGAAACCTAACATGGTTACTCCAGGATCAGAGAGTGCGAAGGT 840
Query 829 TGCTCCAGAGGTGATTGCAGAGCACACTGTCCGTGCTCTTCAGAGGACTGTGCCAGCTGC 888
||| |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||
Sbjct 841 TGCACCAGAGGTGATTGCTGAGCACACTGTCCGTGCTCTTCAGAGGACAGTTCCAGCTGC 900
Query 889 TGTTCCAGCCATAGTGTTCTTGTCTGGTGGACAGAGCGAGGAAGAGGCGACAAGAAACCT 948
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TGTTCCAGCCATAGTGTTCTTGTCTGGTGGACAGAGCGAGGAAGAGGCGACAAGAAACCT 960
Query 949 TAACGCGATGAACAAGTTGAAGACAAAGAAGCCTTGGTC-TCTGTCTTTTTCCTTTGGAA 1007
||||||||||||| ||||||||||||||||||||||||| | ||||||| ||||||||||
Sbjct 961 TAACGCGATGAACCAGTTGAAGACAAAGAAGCCTTGGTCGT-TGTCTTTCTCCTTTGGAA 1019
Query 1008 GGGCGTTGCAACAGAGCACTTTGAAGACTTGGGGAGGAAAAGAGGAGAATGTGACCAAGG 1067
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1020 GGGCGTTGCAGCAGAGCACTTTGAAGACTTGGGGAGGAAAAGAGGAGAATGTGAAGAAGG 1079
Query 1068 CGCAAGAAGCGTTCTTGGTTAGATGCAAGGCCAACTCTGAGGCCACACTTGGTGCCTACA 1127
| ||||||||||||||||| |||||||| || |||||||| || ||||||||||| ||||
Sbjct 1080 CTCAAGAAGCGTTCTTGGTCAGATGCAAAGCTAACTCTGAAGCAACACTTGGTGCTTACA 1139
Query 1128 AAGGTGATGCTAAGCTCGGTGAAGGTGCAGCAGAGAGCCTCCACGTTAAGGATTACAAGT 1187
| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 1140 AGGGTGATGCTAAGCTCGGTGAAGGTGCAGCTGAGAGCCTTCACGTTAAGGATTACAAGT 1199
Query 1188 ACTGATGAAAGAGGCTAAGGATCGTAGTTTTTATATCATCGTTGC-GTTCTTGCTTTCAC 1246
||||| |||||||||| |||||||||||||||||||||||||| ||||||||||||||
Sbjct 1200 ACTGAAGAAAGAGGCTGAGGATCGTAGTTTTTATATCATCGTTTATGTTCTTGCTTTCAC 1259
Query 1247 TTTGTCTGTTTTT 1259
||| |||||||||
Sbjct 1260 TTTCTCTGTTTTT 1272
> AT5G03690.1 | Symbols: | Aldolase superfamily protein | chr5:963148-965050
REVERSE LENGTH=1491
Length=1491
Score = 713 bits (386), Expect = 0.0
Identities = 849/1068 (79%), Gaps = 49/1068 (5%)
Strand=Plus/Plus
Query 144 ATGAGCTGATTGCTAACGCTGCGTACATCGGCACACCTGGGAAAGGTATCCTTGCGGCAG 203
||||||| || || || || || ||||| || ||||| ||||||||||| || || || |
Sbjct 199 ATGAGCTCATCGCCAATGCCGCTTACATAGGAACACCAGGGAAAGGTATTCTCGCTGCTG 258
Query 204 ATGAATCAACTGGTACCATCGGAAAGCGTCTAGCT-AGCATCAACGTTGAGAACGTTGAA 262
||||||| || || || |||||||| ||| | | | ||||| ||||||||||||||||||
Sbjct 259 ATGAATCCACAGGAACAATCGGAAAACGTTTCG-TAAGCATTAACGTTGAGAACGTTGAA 317
Query 263 TCGAACAGACGTGCTCTTCGTGAGCTTC-TCTTCACTACTCCTGGAGCTCTTCCTTGT-C 320
|| |||||||||||||||||||||| || | ||||| ||||||||||||| ||| | |
Sbjct 318 TCAAACAGACGTGCTCTTCGTGAGC-TCTTGTTCACCACTCCTGGAGCTC-TCC-AATAC 374
Query 321 -TCAGTGGTGTTATCCTCTTTGAAGAGACTCTCTACCAGAAGAGCT-C-TAATGGTACGC 377
|||||||| | || ||||| ||||| || ||||||||||| | || | | | || |
Sbjct 375 ATCAGTGGTATCATTCTCTTCGAAGAAACACTCTACCAGAA-AACTGCTTCA-GGGA-AA 431
Query 378 CT-TTTGTGGATATGTTGAA-GAGTGCAGGAGT-CTTGCCTGGTATTAAGGTTGATAAGG 434
|| ||||| ||| | |||| || || ||||| ||| || |||||||| || ||||| |
Sbjct 432 CTATTTGTTGATGTAATGAAGGA-AGCTGGAGTGCTT-CCAGGTATTAAAGTCGATAAAG 489
Query 435 GTACCGTTGAGCTTGCTGGAACCAATGGTGAGACGACTACTCA-AGGTCTTGATGGTCTT 493
| ||||||||||| ||||| || |||||||| || || || || ||||| || || |||
Sbjct 490 GAACCGTTGAGCTCGCTGGTACAAATGGTGAAACCACAAC-CACTGGTCTCGACGGACTT 548
Query 494 GGTGACCGTTGCAAGAAGTACTACGAGGCTGGTGCTCGTTTCGCTAAGTGGCGTGCGGTT 553
||||||||||||||||||||||| || |||||||| ||||| || ||||||||||| |||
Sbjct 549 GGTGACCGTTGCAAGAAGTACTATGAAGCTGGTGCACGTTTTGCCAAGTGGCGTGCTGTT 608
Query 554 CTTAAGATTGGTGAGAATGAGCCCTCTGAGTTAGCTATCCATGAGAACGCTTATGGATTG 613
|| || || || | |||||||| ||||||||||||||||||||||| |||||||| ||
Sbjct 609 CTCAAAATCGGAAACAATGAGCCTTCTGAGTTAGCTATCCATGAGAATGCTTATGGTTTA 668
Query 614 GCTAGGTACGCTGTCATTTGTCAGGAGAACGGTCTTGTGCCGATTGTGGAGCCTGAGATT 673
|| || ||||| || ||||| || |||||||||||||| || ||||| || || ||||||
Sbjct 669 GCGAGATACGCAGTTATTTGCCAAGAGAACGGTCTTGTTCCCATTGTTGAACCAGAGATT 728
Query 674 CTTGTTGATGGTTCTCACGACATCCACAAGTGTGCCGCGGTGACAGAGCGTGTTCTTGCA 733
||||||||||| ||||| ||||| | || ||||| || || || || || |||||
Sbjct 729 CTTGTTGATGGATCTCATGACATTGAGAAATGTGCTTATGTCACGGAACGAGTCCTTGCG 788
Query 734 GCTTGCTACAAGGCCCTGAGTGATCACCATGTCTTGCTT-GAAGGAACACTCTTGAAACC 792
||||| |||||||| || |||||||||||||| | ||| ||||||||||||||||||||
Sbjct 789 GCTTGTTACAAGGCTCTTAGTGATCACCATGTGAT-CTTAGAAGGAACACTCTTGAAACC 847
Query 793 AAACATGGTGACTCCAGGATCAGAGAGTGC--C-AAGGTTGCTCCAGAGGTGATTGC-AG 848
||||||||| |||||||| || || |||| | || ||| || || ||||| || |
Sbjct 848 AAACATGGTTACTCCAGGTTCTGACAGTGGTTCTAAAGTTAAACCCGAAGTGATCGCCA- 906
Query 849 AGCACACTGTCCGTGCTCTT-CAGAGGACTGTGCCAGCTGCTGTTCCAGCCATAGTGTTC 907
||||||| ||||||||| || || |||||||| || || || ||||||||| | ||||||
Sbjct 907 AGCACACGGTCCGTGCT-TTACAAAGGACTGTTCCTGCAGCAGTTCCAGCCGTTGTGTTC 965
Query 908 TTGTCTGGTGGACAGAGCGAGGAAGAGGCGACAA-GAAACCTTAA-CGCGATGAA-CAAG 964
|||||||| |||||||| |||||||| || || ||| |||| ||| || || || |
Sbjct 966 TTGTCTGGAGGACAGAGTGAGGAAGAAGCAACTGTGAAT--TTAAACGCCATTAATCA-G 1022
Query 965 TTGAA-GACAAAGAAGCCTTGGT-CTCTGTCTTTTTCCTTTGGAAGGGCG-TTGCAACAG 1021
| || | || ||| || ||| || || | ||||| | |||| | ||| || ||||||
Sbjct 1023 CTCAAAGGGAA-GAAACCATGGAGCT-TGACGTTTTCGTATGGACGTGCGCTT-CAACAG 1079
Query 1022 AGCACTTTGAAGACTTGGGGAGGAAAAGAGGAGAATGTG-ACCAAGGCGCAAGAAG-CGT 1079
|| || | ||| |||||||||| ||||||||||||||| || ||||| ||| ||| |||
Sbjct 1080 AGTACACTCAAGGCTTGGGGAGGTAAAGAGGAGAATGTGGAC-AAGGCTCAA-AAGGCGT 1137
Query 1080 TCTTGGTTAGATGC-AAGGCCAACTCTGAGGCCACACTTGGTGCCTACAAAGGTGATGCT 1138
|||||| |||| || ||||| |||||||| || || ||||||| |||||| |||||||||
Sbjct 1138 TCTTGGCTAGA-GCCAAGGCTAACTCTGAAGCAACCCTTGGTGGCTACAAGGGTGATGCT 1196
Query 1139 AAGCTCGGTGAAGGTGCAG-CAGAGAGCCTCCACGTTAAGGATTACAA 1185
|| | ||||||||||| | | |||||||| ||||| || || |||||
Sbjct 1197 CAGTTAGGTGAAGGTGC-GTCCGAGAGCCTTCACGTCAAAGACTACAA 1243
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 65411310135
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5