BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg482629
Length=4451
Score E
Sequences producing significant alignments: (Bits) Value
AT2G36490.1 | Symbols: DML1, ROS1 | demeter-like 1 | chr2:15308... 3164 0.0
> AT2G36490.1 | Symbols: DML1, ROS1 | demeter-like 1 | chr2:15308021-15314807
REVERSE LENGTH=4713
Length=4713
Score = 3164 bits (1713), Expect = 0.0
Identities = 2184/2406 (91%), Gaps = 53/2406 (2%)
Strand=Plus/Plus
Query 1 ATGGAGAAACAAG-GGAGAGAAGAAAGCAGCTGTCAACAACCTCCATGGATTCCTCAGAC 59
|||||||||| || |||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 294 ATGGAGAAAC-AGAGGAGAGAAGAAAGCAGCTTTCAACAACCTCCATGGATTCCTCAGAC 352
Query 60 ACCCATGAAGCCAATTTCTCCGATCTGCCCATACACGGTGGAGGAACAATCTCATCGGAA 119
||||||||||||| |||| |||||||||||||||||||||||||| |||| |||| | |
Sbjct 353 ACCCATGAAGCCATTTTCACCGATCTGCCCATACACGGTGGAGGATCAATATCATAGCAG 412
Query 120 TCAAGTGGAGGAAAGGAGATTTGTTGGGAACAAGGACATGAGTGGTCTTGATCACTTGTC 179
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 413 TCAATTGGAGGAAAGGAGATTTGTTGGGAACAAGGATATGAGTGGTCTTGATCACTTGTC 472
Query 180 TTTTGGGGATTTGCTGGCTCTAGCTAACACTGCATCACTCATATTCTCCGGTCAGACTCC 239
||||||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 473 TTTTGGGGATTTGCTTGCTCTAGCTAACACTGCATCCCTCATATTCTCTGGTCAGACTCC 532
Query 240 AAAACCTACAAGAAACACAGAGATGATGCAGAAAGGTAATGAAGAAGTGGAGAGTCTGAG 299
|| ||||||||||||||||||| | ||||| ||||||| |||||||||||||||| ||||
Sbjct 533 AATACCTACAAGAAACACAGAGGTTATGCAAAAAGGTACTGAAGAAGTGGAGAGTTTGAG 592
Query 300 CTCAGTGTGTAACAATGTTGATGAACAGATCATCAAGACTCCTGAAAAACCAAAGAGGAA 359
||||||| |||||||||||| |||||||||| ||||||||||||||||||| ||||||||
Sbjct 593 CTCAGTGAGTAACAATGTTGCTGAACAGATCCTCAAGACTCCTGAAAAACCTAAGAGGAA 652
Query 360 GAAGCATAGACCAAAGGTTATTAGAGAAGCTAAACCCAAGAGGGAGCCTAAACCACAAAC 419
||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| | |
Sbjct 653 GAAGCATCGGCCAAAGGTTCGTAGAGAAGCTAAACCCAAGAGGGAGCCTAAACCACGAGC 712
Query 420 TCCGAGGAAGTCTGTTGTTGCTGAGGGTCAAGAAACCAAAACGCCAAAGAGGAAATATGT 479
|||||||||||||||||| | || |||||||||| |||||| |||||||||||||||||
Sbjct 713 TCCGAGGAAGTCTGTTGTCACCGATGGTCAAGAAAGCAAAACACCAAAGAGGAAATATGT 772
Query 480 GCGGAAGAAGGTGGAAGTCAATAAGGATCAAG-TGTCTACTCCGGTTGAATCATCAGCAG 538
|||||||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||
Sbjct 773 GCGGAAGAAGGTTGAAGTCAGTAAGGATCAAGACG-CTACTCCGGTTGAATCATCAGCAG 831
Query 539 CTGTAGAAACTTCAACTCGTTCTAAGAGGCTTTGTAGACGAGTCTTGGATTTTGAAGCCG 598
|||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 832 CTGTTGAAACTTCAACTCGTCCTAAGAGGCTCTGTAGACGAGTCTTGGATTTTGAAGCCG 891
Query 599 AAACCGGAGAAAACCACTCCAACAGTGACATTAGACAAGCAGGTGAGATGGAATCAACTC 658
||| ||||||||||| ||||| ||||||||||| |||||||||||||||||||| |||
Sbjct 892 AAAATGGAGAAAACCAGACCAACGGTGACATTAGAGAAGCAGGTGAGATGGAATCAGCTC 951
Query 659 TAAAAGAGAAGCATTTAGATTCTGGGAATCAAGAATTAAAGGATAGCTTTCTTTCGGCGC 718
| |||||||||| |||||||||||||||||||| ||||| ||| || |||||||||| |
Sbjct 952 TTCAAGAGAAGCAGTTAGATTCTGGGAATCAAGAGTTAAAAGATTGCCTTCTTTCGGCTC 1011
Query 719 CTAGCACGCCAAAGAGAAAGCGCAGCCAGGGTAAAAGAAAGGGAATTGAACCAAA-AAAC 777
|||||||||| ||||||||||||||||| ||||||||||||||| || ||||||| |||
Sbjct 1012 CTAGCACGCCCAAGAGAAAGCGCAGCCAAGGTAAAAGAAAGGGAGTTCAACCAAAGAAA- 1070
Query 778 AATGGCAGTAACCTAGAAGAAGTTGATATTTCGATGGCACAAGCTGCAAAGAGAAGACAA 837
||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 1071 AATGGCAGTAATCTAGAAGAAGTCGATATTTCGATGGCGCAAGCTGCAAAGAGAAGACAA 1130
Query 838 GGAAAAGCAACTTGTAGTGACATAAATCTATCAGGGATTCAGTACGATGAGCAATGTGAC 897
|| | |||||||| | ||||| |||||||||||||||||||| |||||||||||||||
Sbjct 1131 GG---ACCAACTTGTTGCGACATGAATCTATCAGGGATTCAGTATGATGAGCAATGTGAC 1187
Query 898 TACCAGAAAGTGCATTGGTTGTATTTCCCGAACTTGCAACAGGAAGGGATTAGATCTGAT 957
||||||||| ||||||||||||||| ||| ||||||||||||| |||||| |||| ||||
Sbjct 1188 TACCAGAAAATGCATTGGTTGTATTCCCCAAACTTGCAACAGGGAGGGATGAGATATGAT 1247
Query 958 GCCATATGCAGCAAAGCATTCACTGGACAACTA-CACAAGGATGTTTCTGCCTTTCACGC 1016
||||| |||||||||| |||| ||||||||| | ||||| |||||||||||||||||||
Sbjct 1248 GCCATTTGCAGCAAAGTATTCTCTGGACAAC-AGCACAATTATGTTTCTGCCTTTCACGC 1306
Query 1017 TAAGTTCTACAGTTCAACATCTCAGCCCAGTGCTAATAGAGTCCTAACCATTGAAGAAAG 1076
|| || ||||||||| |||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1307 TACGTGCTACAGTTCCACATCTCAGCTCAGTGCTAATAGAGTCCTAACCGTTGAAGAAAG 1366
Query 1077 ACGAGAAGGTATCTTTCAAGGAAGGCAAGAGTCTGAGTTCAGTTTTCTCTCGGATAAGAT 1136
||||||||||||||||||||||||||||||||||||| | | | ||||||||||||||||
Sbjct 1367 ACGAGAAGGTATCTTTCAAGGAAGGCAAGAGTCTGAGCTAAATGTTCTCTCGGATAAGAT 1426
Query 1137 AGACATGCAGATAAAGAAGAGAACA---GGCCATGCTCGTTTCCGGAATTTGTCTTCCAT 1193
||||| || ||| ||||||| |||| ||||||||||| ||||||||||||||||| ||
Sbjct 1427 AGACACGCCGATCAAGAAGAAAACAACAGGCCATGCTCGATTCCGGAATTTGTCTTCAAT 1486
Query 1194 GAATAAACTTGTGGAAGTTTCTGAGCAGTTATCCTCAGGATGTTATAGCAAGCCACAGCA 1253
||||||||||||||||||| ||||||| ||| ||||||||| || |||||||||||||||
Sbjct 1487 GAATAAACTTGTGGAAGTTCCTGAGCATTTAACCTCAGGATATTGTAGCAAGCCACAGCA 1546
Query 1254 AAATAATAAGATTCTTGTTGATACACGGGTGACTGTGAGCAAAAAGAAGCCAACCACTAA 1313
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 1547 AAATAATAAGATTCTTGTTGATACGCGGGTGACTGTGAGCAAAAAGAAGCCAACCA--A- 1603
Query 1314 GTCTGAGAAATCACAAACCAAACAGAAAACTCTTCTTCCAAATCCTTGCCAGTTT-CCAG 1372
||||||||||||||||||||||||||||| ||||||||| |||| ||||| |||| |||
Sbjct 1604 GTCTGAGAAATCACAAACCAAACAGAAAAATCTTCTTCCGAATCTTTGCC-GTTTTCCAC 1662
Query 1373 CTTCATTTTCTGGTCTTTCTCCAGATGAACTTTGGAAACGACTTAACTCGATCGAAACAA 1432
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1663 CTTCATTTACTGGTCTTTCTCCAGATGAACTTTGGAAACGACGTAACTCGATCGAAACAA 1722
Query 1433 TCAGTGAGCAATTGCGTCTATTAGACATCAACAGGGAGAATTCTGAAACTTCTCTCGTTC 1492
||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 1723 TCAGTGAGCTATTGCGTCTATTAGACATCAACAGGGAGCATTCTGAAACTGCTCTCGTTC 1782
Query 1493 CTTACTCAATGAGAAGCCAAGGAAACCAGATTACACTCTTCGGCGGTGGCGCTGGAGCAA 1552
||||| |||||| | | | ||||||| |||||| || ||||||||||||||||
Sbjct 1783 CTTACACAATGA-AT---A-G----CCAGATTGTACTCTTTGGTGGTGGCGCTGGAGCAA 1833
Query 1553 TTGTGCCTGTAACTCCTGTTAAAAAACGACGCCCACGACCAAAGGTTGACCTAGACGATG 1612
||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct 1834 TTGTGCCTGTAACTCCTGTTAAAAAACCACGCCCACGACCAAAGGTTGATCTAGACGATG 1893
Query 1613 AGACAGAAAAAGTGTGGAAACTGCTATTGGAGAATATTAATAGTGAAGGTGTTGACGGGT 1672
||||||| | ||||||||||||||||||||||||||||||||| |||||||||||||| |
Sbjct 1894 AGACAGACAGAGTGTGGAAACTGCTATTGGAGAATATTAATAGCGAAGGTGTTGACGGAT 1953
Query 1673 CAGACGAGCAGAAGGCGAAATGGTGGGAGGAAGAACGTAATGTGTTTCGAGGAAGAGCAG 1732
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 1954 CAGACGAGCAGAAGGCGAAATGGTGGGAGGAAGAACGTAATGTGTTTCGAGGACGAGCTG 2013
Query 1733 ACTCATTTATAGCACGGATGCATCTTGTACAAGGGGATCGACGTTTTACGCCTTGGAAGG 1792
|||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2014 ACTCATTTATTGCAAGGATGCACCTTGTACAAGGGGATCGACGTTTTACGCCTTGGAAGG 2073
Query 1793 GATCCGTTGTGGATTCTGTTGTTGGAGTATTTCTCACTCAAAATGTTTCGGACCATCTTT 1852
||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |
Sbjct 2074 GATCCGTCGTGGATTCTGTTGTTGGAGTATTTCTCACTCAAAATGTTTCAGACCATCTCT 2133
Query 1853 CAAGTTCCGCCTTCATGTCGCTCGCGGCGGAGTTCCCCGCTCC-TTCAATACCCAGCAGT 1911
||||||| || ||||||||| | || | ||||||| | ||| || |||| ||||||
Sbjct 2134 CAAGTTCGGCTTTCATGTCGTTGGCTTCCCAGTTCCCTG-TCCCTTTTGTACCGAGCAGT 2192
Query 1912 AACTTTGACGTTGGAACAAGCTCGATGCCTTCTATTCAAATAACGTACTTGGACTCAGAA 1971
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2193 AACTTTGACGCTGGAACAAGCTCGATGCCTTCTATTCAAATAACGTACTTGGACTCAGAG 2252
Query 1972 GAATCGATGTCAAACCCACCCGATCACAATCAGAGTTCTGTTA-TTCTAAAAAACACACA 2030
||| ||||||||| |||||||||||||||||| |||||||||| || | ||||| |||||
Sbjct 2253 GAAACGATGTCAAGCCCACCCGATCACAATCACAGTTCTGTTACTT-TGAAAAATACACA 2311
Query 2031 GCCTGATGAGGAGAAGGAGTATGTACATAGCAATGAAACCTCCAGAAGCAGTAGTGAGAT 2090
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 2312 GCCTGATGAGGAGAAGGATTATGTACCTAGCAATGAAACCTCCAGAAGCAGTAGTGAGAT 2371
Query 2091 TGCCAGCTCAGCCCATGAATCAGTTGGCAAAACCACGGATTCAAAG-ACGAACGTGGATT 2149
||||| |||||||||||||||||||| ||||||||||||||||||| | | | || ||||
Sbjct 2372 TGCCATCTCAGCCCATGAATCAGTTGACAAAACCACGGATTCAAAGGA-GTATGTTGATT 2430
Query 2150 CAGATCAAAAAGGCTCA-G---A-AG-TTGATAAGACAGATCATAAGGGCC-TAGTTCTA 2202
|||||| |||||||||| | | || |||||||||| ||| | ||| | | | || ||
Sbjct 2431 CAGATCGAAAAGGCTCAAGTGTAGAGGTTGATAAGACGGATGAGAAGTGTCGT-GTCCT- 2488
Query 2203 GA-CCTGTTTCCATCTGAAGATTCTGCACTTACATGTCAACATTCGATGGTTTCTGATGC 2261
|| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2489 GAACCTGTTTCCATCTGAAGATTCTGCACTTACATGTCAACATTCGATGGTGTCTGATGC 2548
Query 2262 TCCTCAACAAAATACAGAGAGAGCAAGATCAAGCTCAACCTCAGAGATCAACTTAGAAGG 2321
||||||| || ||||||||||||| ||||||||||| |||||| ||||||||||
Sbjct 2549 TCCTCAA-AA--TACAGAGAGAGCAGGATCAAGCTCA------GAGATCGACTTAGAAGG 2599
Query 2322 AGAGTATCGTACTTCCTATATGAAGCTCCTACAGGGGGTACAAGTCTCACTAGAAGAATC 2381
||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||
Sbjct 2600 AGAGTATCGTACTTCCTTTATGAAGCTCCTACAGGGGGTACAAGTCTCTCTAGAAGATTC 2659
Query 2382 CAATCA 2387
||||||
Sbjct 2660 CAATCA 2665
Score = 2697 bits (1460), Expect = 0.0
Identities = 1699/1813 (94%), Gaps = 22/1813 (1%)
Strand=Plus/Plus
Query 2650 AAAGGAAAAAAGGTTTTGAAGGA-GAAGAAAGAGGCGTTTGACTGGGATAGTTTAAGAAG 2708
||||| ||||||||||||||||| ||| ||| | ||||||||||||||| ||||||||||
Sbjct 2826 AAAGGGAAAAAGGTTTTGAAGGAGGAA-AAAAAAGCGTTTGACTGGGATTGTTTAAGAAG 2884
Query 2709 AGAAGCACAAGGTAGAGAAGGAATAAGAGAAAAAAC-AGCAAGGACAATGGACACTGTGG 2767
|||||| |||| ||||| |||||| ||||||||||| || ||| ||||||||||| ||||
Sbjct 2885 AGAAGCCCAAGCTAGAGCAGGAATTAGAGAAAAAACAAG-AAGTACAATGGACACCGTGG 2943
Query 2768 ACTGGGAGGCAATACGAGCGGCCGATGTT-AGTGAAGTTGCTGAAACAATCAAGAGTCGC 2826
| ||| ||||||||||||| || |||||| || |||||||||||||||||||||||||||
Sbjct 2944 ATTGGAAGGCAATACGAGCAGCAGATGTTAAG-GAAGTTGCTGAAACAATCAAGAGTCGC 3002
Query 2827 GGGATGAACCATAAACTTGCAGAACGAATACAGGGCTTCCTTGATCGACTGGTCGATGAC 2886
|||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 3003 GGGATGAACCATAAACTTGCAGAACGTATACAGGGCTTCCTTGATCGACTGGTAAATGAC 3062
Query 2887 CATGGAAGTATCGATCTTGAATGGTTGAGAGATGTTCCACCCGATAAAGCAAAAGAATAT 2946
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3063 CATGGAAGTATCGATCTTGAATGGTTGAGAGATGTTCCACCAGATAAAGCAAAAGAATAT 3122
Query 2947 CTTCTGAGCTTTAATGGTTTGGGACTAAAAAGTGTGGAGTGTGTGCGGCTTCTAACACTG 3006
|||||||||||||| || |||||||| ||||||||||||||||||||||||||||||||
Sbjct 3123 CTTCTGAGCTTTAACGGATTGGGACTGAAAAGTGTGGAGTGTGTGCGGCTTCTAACACTT 3182
Query 3007 CACCATCTTGCCTTTCCAGTTGATACAAATGTTGGGCGCATAGCCGTTAGACTTGGATGG 3066
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3183 CACCATCTTGCCTTTCCAGTTGATACAAATGTTGGGCGCATAGCCGTCAGACTTGGATGG 3242
Query 3067 GTACCCCTTCAACCGCTCCCAGAGTCACTTCAGTTGCATCTTCTAGAAATGTATCCTGTT 3126
|| |||||||| |||||||||||||||||||||||||||||||| |||||||||||| |
Sbjct 3243 GTGCCCCTTCAGCCGCTCCCAGAGTCACTTCAGTTGCATCTTCTGGAAATGTATCCTATG 3302
Query 3127 CTCGAATCTATTCAAAAGTATCTTTGGCCTCGTCTCTGCAAACTCGACCAAAAAACATTG 3186
|| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3303 CTTGAATCTATTCAAAAGTATCTTTGGCCCCGTCTCTGCAAACTCGACCAAAAAACATTG 3362
Query 3187 TATGAGTTGCACTACCAGATGATCACTTTTGGAAAGGTGTTTTGCACAAAGAGCAAACCT 3246
||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 3363 TATGAGTTGCACTACCAGATGATTACTTTTGGAAAGGTCTTTTGCACAAAGAGCAAACCT 3422
Query 3247 AATTGCAATGCATGTCCCATGAGAGGAGAATGCAGACATTTTGCCAGTGCGTTTGCAAGT 3306
||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||
Sbjct 3423 AATTGCAATGCATGTCCGATGAAAGGAGAATGCAGACATTTTGCCAGTGCGTTTGCAAGT 3482
Query 3307 GCAAGGCTTGCTTTACCCAGTACAGAGAAAGGTATGGGGACACCTGATAAAAACCCTTTG 3366
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 3483 GCAAGGCTTGCTTTACCAAGTACAGAGAAAGGTATGGGGACACCTGATAAAAACCCTTTG 3542
Query 3367 CCTCTGCACCTGCCAGAGCCATTGCAGAGAGAGCAAGGGTCTGAAGTAGTACAGCACTCA 3426
||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3543 CCTCTACACCTGCCAGAGCCATTCCAGAGAGAGCAAGGGTCTGAAGTAGTACAGCACTCA 3602
Query 3427 GAACCAGCAAAAAAGGTCACATGTTCTGAACCAATCATCGAAGAGCCTGCTTCACCGGAG 3486
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3603 GAACCAGCAAAAAAGGTCACATGTTGTGAACCAATCATCGAAGAGCCTGCTTCACCGGAG 3662
Query 3487 CCAGAAAGCGCACAAGTATCAATAGCTGACATAGAGGATGCGTTTTTTGAGGATCCAGAA 3546
||||||| |||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3663 CCAGAAACCGCAGAAGTATCAATAGCTGACATAGAGGAGGCGTTTTTTGAGGATCCAGAA 3722
Query 3547 GAAATTCCTACAATCAGGCTAAACATGGATGCATTTACCAGTAATTTGAAGAA-ATTAAT 3605
||||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||
Sbjct 3723 GAAATTCCTACCATCAGGCTAAACATGGATGCATTTACCAGTAACTTGAAGAAGAT-AAT 3781
Query 3606 GGAACACAACAAGGACCTTCAAGACGGAAACATGTCCAGCGCTTTAGTTGCACTTACTGC 3665
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3782 GGAACACAACAAGGAACTTCAAGACGGAAACATGTCCAGCGCTTTAGTTGCACTTACTGC 3841
Query 3666 TGAAGCTGCTTCTCTTCCAATACCTAAGCTCAAGAATATCAGCCAGTTAAGGACAGAACA 3725
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3842 TGAAACTGCTTCTCTTCCAATGCCTAAGCTCAAGAATATCAGCCAGTTAAGGACAGAACA 3901
Query 3726 CCAAGTTTATGAACTTCCAGACGAGCATCCTCTTCTAGTTCATTTGGAGAAGAGAGAACC 3785
|| |||||| |||||||||||||||||||||||||||| ||| ||||| |||||||||||
Sbjct 3902 CCGAGTTTACGAACTTCCAGACGAGCATCCTCTTCTAGCTCAGTTGGAAAAGAGAGAACC 3961
Query 3786 TGATGATCCATGTTCTTATTTGCTTGCTATTTGGACGCCAGGTGAGACGGCTGATTCTAT 3845
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3962 TGATGATCCATGTTCTTATTTGCTTGCTATATGGACGCCAGGTGAGACGGCTGATTCTAT 4021
Query 3846 TCAACCGGCTGTAAGTAAGTGTATATTCCAAGCAAATGGTAAGCTTTGTGATGAGGAGAC 3905
||||||| |||| |||| ||| ||||||||||||||||||| ||||||||| ||||||||
Sbjct 4022 TCAACCGTCTGTTAGTACGTGCATATTCCAAGCAAATGGTATGCTTTGTGACGAGGAGAC 4081
Query 3906 TTGTTTCTCCTGCAATAGCATCAAGGAGGCGAGATCTCAGATTGTGAGAGGGACTATCTT 3965
||||||||||||||| |||||||||||| | |||||||| |||||||||||||| || ||
Sbjct 4082 TTGTTTCTCCTGCAACAGCATCAAGGAGACTAGATCTCAAATTGTGAGAGGGACAATTTT 4141
Query 3966 GATTCCTTGTAGAACCGCGATGAGGGGTAGTTTTCCTCTCAATGGAACCTACTTTCAAGT 4025
||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||
Sbjct 4142 GATTCCTTGTAGAACAGCGATGAGGGGTAGTTTTCCTCTAAATGGAACGTACTTTCAAGT 4201
Query 4026 AAACGAGGTTTTTGCGGATCATGCTTCCAGCCTTAACCCAATCGATGTCCCAAGGGAATG 4085
||| ||||| |||||||||||||| |||||||| ||||||||| |||||||||||||||
Sbjct 4202 AAATGAGGTGTTTGCGGATCATGCATCCAGCCTAAACCCAATCAATGTCCCAAGGGAATT 4261
Query 4086 GATATGGGACTTACCTCGAAGAACGGTCTACTTTGGTACCTCTATTCCAACGATATTCAA 4145
||||||||| |||||||||||||||||||| |||||||||||| |||| |||||||||||
Sbjct 4262 GATATGGGAATTACCTCGAAGAACGGTCTATTTTGGTACCTCTGTTCCTACGATATTCAA 4321
Query 4146 AGGTTTACCAACCGAGACGATTCAG-CAGTG-TTTCTGGAAAGGGTACGTATGTGTACGA 4203
||||||| |||| |||| ||| ||| | || ||| |||||||||||||||||||||||
Sbjct 4322 AGGTTTATCAACTGAGAAGATACAGGCT-TGCTTT-TGGAAAGGGTACGTATGTGTACGT 4379
Query 4204 GGATTTGATCGAACGACGAGAGGACCGAAGCCTTTGATTGCAAGATTGCACTTCCCGGCG 4263
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 4380 GGATTTGATCGAAAGACGAGGGGACCGAAGCCTTTGATTGCAAGATTGCACTTCCCGGCG 4439
Query 4264 AGCAAACTGAAGGCA-AACCAAGCTAACCTCGCCTAATCCGTAGGCAAGCAAACAAATAC 4322
||||||||||||| | ||| |||||||||||||||||||||| |||||||||||||||||
Sbjct 4440 AGCAAACTGAAGGGACAAC-AAGCTAACCTCGCCTAATCCGTTGGCAAGCAAACAAATAC 4498
Query 4323 A-GCTTCTTATGGTTAGAGAGTGAAAGAGCACACTGTACCAATCTAGTTAATGTAAGAAA 4381
| |||| ||||||| ||||||| |||||||||||| ||||||||||||||||||||||
Sbjct 4499 AAGCTT---ATGGTTA-AGAGTGAGAGAGCACACTGTTCCAATCTAGTTAATGTAAGAAA 4554
Query 4382 GTGAAA-CGTCGAGTTAACAGTCCTAGAGTTGTAAAAGGTTT-TAAATCCCATTTTAGTT 4439
|||||| ||| |||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct 4555 GTGAAAACGTAAAGTTAACAGTCCTAGAGTTGTACAAGGTTTCTAAATCCCATTTTAGTT 4614
Query 4440 TCGTCTTAA-TTT 4451
||||||||| |||
Sbjct 4615 TCGTCTTAAATTT 4627
Score = 211 bits (114), Expect = 4e-53
Identities = 138/149 (93%), Gaps = 4/149 (3%)
Strand=Plus/Plus
Query 2425 GTATCACCAAATATGTCTCCCGGTGATTGTAGCTCAGAAATTAAGGATTTCCAGTCACTG 2484
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||| ||
Sbjct 2667 GTATCACCAAATATGTCTCCGGGTGATTGTAGCTCAGAAATTAAGGGTTTCCAGTCAATG 2726
Query 2485 AAAGGA-CCCACAAAATCTTCTGATGATAGTAATGAACCAT-GTTGTTGCTATCAGCAAG 2542
||| || ||||||||||| |||| |||||||| |||||| | ||||||||| ||||||||
Sbjct 2727 AAA-GAGCCCACAAAATCCTCTGTTGATAGTAGTGAACC-TGGTTGTTGCTCTCAGCAAG 2784
Query 2543 ATGGGGATGTTTTGAGTTGTCAGAAACCT 2571
|||||||||||||||||||||||||||||
Sbjct 2785 ATGGGGATGTTTTGAGTTGTCAGAAACCT 2813
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 221938555832
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5