BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg482632 Length=717 Score E Sequences producing significant alignments: (Bits) Value AT2G36540.1 | Symbols: | Haloacid dehalogenase-like hydrolase ... 536 1e-151 AT2G36550.1 | Symbols: | CONTAINS InterPro DOMAIN/s: NLI inter... 455 3e-127 > AT2G36540.1 | Symbols: | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein | chr2:15325237-15326449 FORWARD LENGTH=750 Length=750 Score = 536 bits (290), Expect = 1e-151 Identities = 350/379 (92%), Gaps = 3/379 (1%) Strand=Plus/Plus Query 340 GACCAAGAAGAGTGTACGGACAGTGGATTTAAAACACTAGAGAACCGTTACAAGCCTTTG 399 ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 374 GACCAAG-AGAGTGTACGGACAGTGGATATAAAACACTAGAGAACCGTTACAAGCCTTTG 432 Query 400 TTCTTCAAGGATCTCTCCAAAGTGTTTC-AGTGCTTCAAAGGCTTCTCTGCTTCAAATTC 458 ||||| ||||||||||| |||||| ||| ||||||| |||||||||||||||||||| | Sbjct 433 TTCTTTAAGGATCTCTCTAAAGTG-TTCAAGTGCTTTAAAGGCTTCTCTGCTTCAAACAC 491 Query 459 CATCTTCATTGATGATGAACCCTATAAAGCTCTTCGTAATCCTGACAATACTGGTCTGTT 518 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 492 CATCTTCATTGATGATGAACCATATAAAGCTCTTCGTAATCCTGACAATACTGGTCTGTT 551 Query 519 TCCAATGAGCTATGACCCTTCTAACAAAAATGATAGTTTACTTGATCCAGAAGGAGAGTT 578 |||||||||||||| ||||||||| ||| |||| |||||||||||| ||||||||||| Sbjct 552 CCCAATGAGCTATGATGCTTCTAACATAAAGGATAATTTACTTGATCCGGAAGGAGAGTT 611 Query 579 CTGTTCTTACTTGGACGGTTTAGCAAAATCATCGGATGTTCAGGCTTACATAAAAGAGCA 638 |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 612 GTGTTCTTACTTGGAAGGTTTGGCAAAATCATCGGATGTTCAGGCTTACATAAAAGTGCA 671 Query 639 CTCTTTTGGACAGCCCAAGATCGATTCTTCTCATCCCGATTGGTCTTTCTACCGCAAAGT 698 |||||||||| ||||| |||||||||||||||||| ||||||||||||||| |||| || Sbjct 672 TTCTTTTGGACGGCCCATGATCGATTCTTCTCATCCTGATTGGTCTTTCTACAGCAACGT 731 Query 699 GTCGAAGATTGTCTCTTAA 717 || ||||||||||||||| Sbjct 732 TTCAAAGATTGTCTCTTAA 750 Score = 459 bits (248), Expect = 2e-128 Identities = 314/345 (91%), Gaps = 7/345 (2%) Strand=Plus/Plus Query 1 ATGGCTGAAGAAAA-ACTCAAGAAGAGTATCATTTG-TTCCGACGACAGCGACGATGAGT 58 |||||||||||||| | |||||||||| | ||| | | ||||||||||||||||||| Sbjct 1 ATGGCTGAAGAAAAGA-TCAAGAAGAG-CTTGCTTGCTGCGGACGACAGCGACGATGAGT 58 Query 59 ACTC---AGGTGACACTGTTTCAGAGCAGACAGAACTGAGTTCGATCCTGGGTAAACTTA 115 |||| |||||| || |||||||| |||||||||||||||||||| || | |||||||| Sbjct 59 ACTCAAGAGGTGATACAGTTTCAGATCAGACAGAACTGAGTTCGATTCTTGATAAACTTA 118 Query 116 GTATAGAACCCGAGAAGGAGAAGAAGAAACTCTTGGTCTTGAGTCTAAGTGGTCTTCTTC 175 || ||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||| Sbjct 119 GTCTAGAACCTAAGACGGAGAAAAAGAAACTCTTGGTCTTGAGTCTAAGTGGTCTTCTTC 178 Query 176 TTCACAGAGTCCACATAAAAGAGATGCGTAAGAAACCCAAGAACCGCTCTCCTGATGCTT 235 ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 179 TTCACAGAGTCCACAAAAAAGAGTTGCGTAAGAAACCCAAGAACCGCTCTCCTGATGCTT 238 Query 236 CTTGTGGCCCAAATCTTGTGTATAAGAGGCCATTTGCTGAAGAGTTTATGAAGTTTTGTC 295 ||||||| |||||||||||||||||||| || |||||||||||||||||||||||||||| Sbjct 239 CTTGTGGGCCAAATCTTGTGTATAAGAGACCGTTTGCTGAAGAGTTTATGAAGTTTTGTC 298 Query 296 TTGAGAGATTCGAAGTTGGGATTTGGTCCTCTGCTTGCGAGTTAG 340 |||||||||| |||||||| ||||||||||||||||||||||||| Sbjct 299 TTGAGAGATTTGAAGTTGGTATTTGGTCCTCTGCTTGCGAGTTAG 343 > AT2G36550.1 | Symbols: | CONTAINS InterPro DOMAIN/s: NLI interacting factor (InterPro:IPR004274); BEST Arabidopsis thaliana protein match is: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR:AT2G36540.1); Has 91 Blast hits to 91 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:15327479-15328802 FORWARD LENGTH=720 Length=720 Score = 455 bits (246), Expect = 3e-127 Identities = 335/378 (89%), Gaps = 6/378 (2%) Strand=Plus/Plus Query 343 CAAGAAGAGTGTACGGACAGTGGATTTAAAACACTAGAGAACCGTTACAAGCCTTTGTTC 402 |||||| |||||||||||||||||| |||||| || |||||| || |||||||| ||||| Sbjct 346 CAAGAAAAGTGTACGGACAGTGGATATAAAACGCTTGAGAACAGTGACAAGCCTCTGTTC 405 Query 403 TTCAAGGATCTCTCCAAAGTGTTTCAGTGCTTCAAAGGCTTCTCTGCTTCAAATTCCATC 462 || ||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| Sbjct 406 TTTAAGGATCTCTCTAAAGTGTTTCAGTGCTTCAAAGGTTTCTCTGCTTCAAACACCATA 465 Query 463 TTCATTGATGATGAACCCTATAAAGCTCTTCGTAATCCTGACAATACTGGTCTGTTTCCA 522 |||||||| || ||||| || |||||||||| ||||||||||||||| ||| |||| || Sbjct 466 TTCATTGAAGAAGAACCTTACAAAGCTCTTCTTAATCCTGACAATACAGGTGTGTTCCCG 525 Query 523 ATGAGCTATGACCCTTCTA-ACA-AAAATGATAGTTTACTTGATCCAGAAGGAGAGTTCT 580 |||| |||||||| || | ||| |||| |||| |||||||||||||||||||||||||| Sbjct 526 TTGAGTTATGACCCGTC-AGACACAAAA-GATAATTTACTTGATCCAGAAGGAGAGTTCT 583 Query 581 GTTCTTACTTGGACGGTTTAGCAAAATCATCGGATGTTCAGGCTTACATAAAAGAGCACT 640 ||||||||||||| ||||| ||||| ||||| |||||||||||||||||||| ||||| | Sbjct 584 GTTCTTACTTGGATGGTTTGGCAAATTCATCTGATGTTCAGGCTTACATAAAGGAGCA-T 642 Query 641 C-TTTTGGACAGCCCAAGATCGATTCTTCTCATCCCGATTGGTCTTTCTACCGCAAAGTG 699 | |||||||||||||| ||||||||||||||||| |||||||||| |||||||| |||| Sbjct 643 CCTTTTGGACAGCCCATGATCGATTCTTCTCATCTTGATTGGTCTTACTACCGCAGAGTG 702 Query 700 TCGAAGATTGTCTCTTAA 717 ||||| |||||||||||| Sbjct 703 TCGAATATTGTCTCTTAA 720 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 34762029724 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5